RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 ANO8Q9HCE9 1232 aaPredicted RBP8.83□□□□□ -1
CLK1-207ENST00000461981 DNMT1P26358 1616 aaKnown RBP8.82□□□□□ -1
CLK1-207ENST00000461981 SYCP2Q9BX26 1530 aa8.81□□□□□ -1
CLK1-207ENST00000461981 SHANK2Q9UPX8 1470 aa8.8□□□□□ -1
CLK1-207ENST00000461981 MBD5Q9P267 1494 aa8.8□□□□□ -1
CLK1-207ENST00000461981 CCDC141Q6ZP82 1450 aa8.8□□□□□ -1
CLK1-207ENST00000461981 ARHGAP31Q2M1Z3 1444 aa8.79□□□□□ -1
CLK1-207ENST00000461981 DHX29Q7Z478 1369 aaKnown RBP8.79□□□□□ -1
CLK1-207ENST00000461981 NEURL4Q96JN8 1562 aa8.79□□□□□ -1
CLK1-207ENST00000461981 LMTK2Q8IWU2 1503 aa8.78□□□□□ -1
CLK1-207ENST00000461981 PTPN23Q9H3S7 1636 aa8.78□□□□□ -1
CLK1-207ENST00000461981 MIA2Q96PC5 1412 aa8.78□□□□□ -1
CLK1-207ENST00000461981 VWDEQ8N2E2 1590 aa8.78□□□□□ -1
CLK1-207ENST00000461981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.77□□□□□ -1
CLK1-207ENST00000461981 TRIM26Q12899 539 aaPredicted RBP8.77□□□□□ -1
CLK1-207ENST00000461981 HNRNPUL2Q1KMD3 747 aaKnown RBP8.77□□□□□ -1
CLK1-207ENST00000461981 YTHDC1Q96MU7 727 aaKnown RBP8.77□□□□□ -1.01
CLK1-207ENST00000461981 ZMYM3Q14202 1370 aa8.77□□□□□ -1.01
CLK1-207ENST00000461981 SOCS7O14512 581 aa8.77□□□□□ -1.01
CLK1-207ENST00000461981 CROCC2H7BZ55 1655 aa8.76□□□□□ -1.01
CLK1-207ENST00000461981 SLIT1O75093 1534 aa8.76□□□□□ -1.01
CLK1-207ENST00000461981 SPAG9O60271 1321 aaKnown RBP8.76□□□□□ -1.01
CLK1-207ENST00000461981 LRRC9Q6ZRR7 1453 aa8.75□□□□□ -1.01
CLK1-207ENST00000461981 IQGAP1P46940 1657 aa8.75□□□□□ -1.01
CLK1-207ENST00000461981 ARHGAP23Q9P227 1491 aa8.75□□□□□ -1.01
CLK1-207ENST00000461981 CCNB3Q8WWL7 1395 aa8.75□□□□□ -1.01
CLK1-207ENST00000461981 ESF1Q9H501 851 aaKnown RBP8.75□□□□□ -1.01
CLK1-207ENST00000461981 P3H3Q8IVL6 736 aa8.75□□□□□ -1.01
CLK1-207ENST00000461981 PRDM15P57071 1507 aaPredicted RBP8.75□□□□□ -1.01
CLK1-207ENST00000461981 DUOX2Q9NRD8 1548 aa8.74□□□□□ -1.01
CLK1-207ENST00000461981 EIF5BO60841 1220 aaKnown RBP8.74□□□□□ -1.01
CLK1-207ENST00000461981 NWD1Q149M9 1564 aa8.74□□□□□ -1.01
CLK1-207ENST00000461981 ABCC3O15438 1527 aa8.73□□□□□ -1.01
CLK1-207ENST00000461981 NCOA3Q9Y6Q9 1424 aa8.72□□□□□ -1.01
CLK1-207ENST00000461981 TNRQ92752 1358 aa8.72□□□□□ -1.01
CLK1-207ENST00000461981 ERBINQ96RT1 1412 aa8.72□□□□□ -1.01
CLK1-207ENST00000461981 MROH1Q8NDA8 1641 aa8.72□□□□□ -1.01
CLK1-207ENST00000461981 UGGT1Q9NYU2 1555 aa8.71□□□□□ -1.01
CLK1-207ENST00000461981 UBR1Q8IWV7 1749 aa8.71□□□□□ -1.01
CLK1-207ENST00000461981 MED1Q15648 1581 aaPredicted RBP8.71□□□□□ -1.02
CLK1-207ENST00000461981 DIP2AQ14689 1571 aa8.7□□□□□ -1.02
CLK1-207ENST00000461981 DIEXFQ68CQ4 756 aaKnown RBP8.7□□□□□ -1.02
CLK1-207ENST00000461981 ERVK-7P63135 1459 aa8.69□□□□□ -1.02
CLK1-207ENST00000461981 NKTRP30414 1462 aaKnown RBP8.69□□□□□ -1.02
CLK1-207ENST00000461981 AFAP1Q8N556 730 aa8.68□□□□□ -1.02
CLK1-207ENST00000461981 CCDC136Q96JN2 1154 aa8.68□□□□□ -1.02
CLK1-207ENST00000461981 RPRD2Q5VT52 1461 aaKnown RBP8.68□□□□□ -1.02
CLK1-207ENST00000461981 NPHP4O75161 1426 aaPredicted RBP8.68□□□□□ -1.02
CLK1-207ENST00000461981 MTUS2Q5JR59 1369 aa8.68□□□□□ -1.02
CLK1-207ENST00000461981 PLEKHG5O94827 1062 aa8.68□□□□□ -1.02
CLK1-207ENST00000461981 TSHZ2Q9NRE2 1034 aa8.67□□□□□ -1.02
CLK1-207ENST00000461981 ADGRL2O95490 1459 aa8.66□□□□□ -1.02
CLK1-207ENST00000461981 MYOM3Q5VTT5 1437 aa8.66□□□□□ -1.02
CLK1-207ENST00000461981 ALKQ9UM73 1620 aa8.66□□□□□ -1.02
CLK1-207ENST00000461981 UBTFP17480 764 aaKnown RBP8.65□□□□□ -1.02
CLK1-207ENST00000461981 HSPA2P54652 639 aa8.65□□□□□ -1.02
CLK1-207ENST00000461981 THEMISQ8N1K5 641 aaPredicted RBP8.65□□□□□ -1.02
CLK1-207ENST00000461981 CFDP1Q9UEE9 299 aaPredicted RBP8.65□□□□□ -1.02
CLK1-207ENST00000461981 GCC2Q8IWJ2 1684 aa8.64□□□□□ -1.03
CLK1-207ENST00000461981 UBE2Q2Q8WVN8 375 aa8.64□□□□□ -1.03
CLK1-207ENST00000461981 SALL2Q9Y467 1007 aaPredicted RBP8.64□□□□□ -1.03
CLK1-207ENST00000461981 VPS8Q8N3P4 1428 aa8.63□□□□□ -1.03
CLK1-207ENST00000461981 CHIC1Q5VXU3 224 aa8.63□□□□□ -1.03
CLK1-207ENST00000461981 SCAF11Q99590 1463 aaKnown RBP8.63□□□□□ -1.03
CLK1-207ENST00000461981 FAM135BQ49AJ0 1406 aa8.63□□□□□ -1.03
CLK1-207ENST00000461981 TOM1O60784 492 aa8.63□□□□□ -1.03
CLK1-207ENST00000461981 ADGRB3O60242 1522 aa8.63□□□□□ -1.03
CLK1-207ENST00000461981 DISP3Q9P2K9 1392 aa8.63□□□□□ -1.03
CLK1-207ENST00000461981 LRRC7Q96NW7 1537 aa8.63□□□□□ -1.03
CLK1-207ENST00000461981 CEP152O94986 1710 aa8.62□□□□□ -1.03
CLK1-207ENST00000461981 XIRP1Q702N8 1843 aaKnown RBP8.62□□□□□ -1.03
CLK1-207ENST00000461981 TET3O43151 1660 aa8.61□□□□□ -1.03
CLK1-207ENST00000461981 ANKLE2Q86XL3 938 aa8.61□□□□□ -1.03
CLK1-207ENST00000461981 PIK3R4Q99570 1358 aa8.61□□□□□ -1.03
CLK1-207ENST00000461981 UNC13BO14795 1591 aa8.61□□□□□ -1.03
CLK1-207ENST00000461981 PIK3C2BO00750 1634 aa8.61□□□□□ -1.03
CLK1-207ENST00000461981 DAXXQ9UER7 740 aaPredicted RBP8.61□□□□□ -1.03
CLK1-207ENST00000461981 EFCAB6Q5THR3 1501 aa8.61□□□□□ -1.03
CLK1-207ENST00000461981 STRCP1A6NGW2 1772 aa8.6□□□□□ -1.03
CLK1-207ENST00000461981 ARID3CA6NKF2 412 aa8.6□□□□□ -1.03
CLK1-207ENST00000461981 PRAG1Q86YV5 1406 aa8.6□□□□□ -1.03
CLK1-207ENST00000461981 LAMC1P11047 1609 aa8.6□□□□□ -1.03
CLK1-207ENST00000461981 MLECQ14165 292 aa8.59□□□□□ -1.03
CLK1-207ENST00000461981 IQGAP3Q86VI3 1631 aa8.59□□□□□ -1.03
CLK1-207ENST00000461981 NOS1P29475 1434 aa8.59□□□□□ -1.03
CLK1-207ENST00000461981 FGD6Q6ZV73 1430 aa8.59□□□□□ -1.03
CLK1-207ENST00000461981 CDK12Q9NYV4 1490 aaPredicted RBP8.58□□□□□ -1.04
CLK1-207ENST00000461981 SHPRHQ149N8 1683 aa8.58□□□□□ -1.04
CLK1-207ENST00000461981 AHDC1Q5TGY3 1603 aaPredicted RBP8.58□□□□□ -1.04
CLK1-207ENST00000461981 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.58□□□□□ -1.04
CLK1-207ENST00000461981 CEBPAP49715 358 aaPredicted RBP8.58□□□□□ -1.04
CLK1-207ENST00000461981 KANK1Q14678 1352 aa8.57□□□□□ -1.04
CLK1-207ENST00000461981 LOC105371045A0A1W2PR82 267 aa8.57□□□□□ -1.04
CLK1-207ENST00000461981 DCCP43146 1447 aa8.57□□□□□ -1.04
CLK1-207ENST00000461981 CHD2O14647 1828 aaKnown RBP8.57□□□□□ -1.04
CLK1-207ENST00000461981 TSPY4P0CV99 314 aa8.55□□□□□ -1.04
CLK1-207ENST00000461981 TSPY10P0CW01 314 aa8.55□□□□□ -1.04
CLK1-207ENST00000461981 HNRNPMP52272 730 aaKnown RBP eCLIP8.55□□□□□ -1.04
CLK1-207ENST00000461981 NCKAP5LQ9HCH0 1330 aa8.55□□□□□ -1.04
CLK1-207ENST00000461981 SUPT16HQ9Y5B9 1047 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms