RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 THEMISQ8N1K5 641 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC10-205ENST00000461889 IQGAP1P46940 1657 aa12.16□□□□□ -0.46
TRAPPC10-205ENST00000461889 ABCC1P33527 1531 aa12.15□□□□□ -0.46
TRAPPC10-205ENST00000461889 PRXQ9BXM0 1461 aa12.14□□□□□ -0.47
TRAPPC10-205ENST00000461889 XIRP1Q702N8 1843 aaKnown RBP12.14□□□□□ -0.47
TRAPPC10-205ENST00000461889 ROBO1Q9Y6N7 1651 aa12.14□□□□□ -0.47
TRAPPC10-205ENST00000461889 SUPT5HO00267 1087 aaKnown RBP12.14□□□□□ -0.47
TRAPPC10-205ENST00000461889 ARHGAP5Q13017 1502 aa12.14□□□□□ -0.47
TRAPPC10-205ENST00000461889 SPATA31A6Q5VVP1 1343 aa12.13□□□□□ -0.47
TRAPPC10-205ENST00000461889 KDM5DQ9BY66 1539 aa12.13□□□□□ -0.47
TRAPPC10-205ENST00000461889 LRP6O75581 1613 aa12.12□□□□□ -0.47
TRAPPC10-205ENST00000461889 TNRQ92752 1358 aa12.11□□□□□ -0.47
TRAPPC10-205ENST00000461889 ITSN2Q9NZM3 1697 aa12.1□□□□□ -0.47
TRAPPC10-205ENST00000461889 LRRC9Q6ZRR7 1453 aa12.09□□□□□ -0.47
TRAPPC10-205ENST00000461889 LRP5O75197 1615 aa12.09□□□□□ -0.47
TRAPPC10-205ENST00000461889 MEX3CQ5U5Q3 659 aaKnown RBP12.09□□□□□ -0.47
TRAPPC10-205ENST00000461889 FAM135AQ9P2D6 1515 aa12.09□□□□□ -0.47
TRAPPC10-205ENST00000461889 FGD6Q6ZV73 1430 aa12.09□□□□□ -0.47
TRAPPC10-205ENST00000461889 PLXNC1O60486 1568 aa12.09□□□□□ -0.47
TRAPPC10-205ENST00000461889 RGS12O14924 1447 aa12.08□□□□□ -0.48
TRAPPC10-205ENST00000461889 UGGT1Q9NYU2 1555 aa12.08□□□□□ -0.48
TRAPPC10-205ENST00000461889 PHLPP1O60346 1717 aa12.08□□□□□ -0.48
TRAPPC10-205ENST00000461889 NLRP1Q9C000 1473 aa12.08□□□□□ -0.48
TRAPPC10-205ENST00000461889 ZC3H13Q5T200 1668 aaKnown RBP12.07□□□□□ -0.48
TRAPPC10-205ENST00000461889 ATAD2Q6PL18 1390 aa12.06□□□□□ -0.48
TRAPPC10-205ENST00000461889 GGT6Q6P531 493 aa12.06□□□□□ -0.48
TRAPPC10-205ENST00000461889 ATP7AQ04656 1500 aa12.05□□□□□ -0.48
TRAPPC10-205ENST00000461889 KIF14Q15058 1648 aa12.04□□□□□ -0.48
TRAPPC10-205ENST00000461889 CDC42BPBQ9Y5S2 1711 aa12.04□□□□□ -0.48
TRAPPC10-205ENST00000461889 NUTM2BA6NNL0 878 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC10-205ENST00000461889 NUTM2EB1AL46 878 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC10-205ENST00000461889 RBM6P78332 1123 aaKnown RBP12.04□□□□□ -0.48
TRAPPC10-205ENST00000461889 NUTM2DQ5VT03 806 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC10-205ENST00000461889 FBXO31Q5XUX0 539 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC10-205ENST00000461889 CCDC125Q86Z20 511 aa12.04□□□□□ -0.48
TRAPPC10-205ENST00000461889 NUTM2AQ8IVF1 878 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC10-205ENST00000461889 COL16A1Q07092 1604 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC10-205ENST00000461889 MIA2Q96PC5 1412 aa12.03□□□□□ -0.48
TRAPPC10-205ENST00000461889 A2MP01023 1474 aa12.03□□□□□ -0.48
TRAPPC10-205ENST00000461889 PZPP20742 1482 aa12.03□□□□□ -0.48
TRAPPC10-205ENST00000461889 SAMD9LQ8IVG5 1584 aa12.03□□□□□ -0.48
TRAPPC10-205ENST00000461889 CDK11AQ9UQ88 783 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC10-205ENST00000461889 TMEM94Q12767 1356 aa12.02□□□□□ -0.49
TRAPPC10-205ENST00000461889 SLAIN2Q9P270 581 aa12□□□□□ -0.49
TRAPPC10-205ENST00000461889 SPAG9O60271 1321 aaKnown RBP12□□□□□ -0.49
TRAPPC10-205ENST00000461889 AFF2P51816 1311 aa12□□□□□ -0.49
TRAPPC10-205ENST00000461889 MAP3K1Q13233 1512 aa12□□□□□ -0.49
TRAPPC10-205ENST00000461889 SHPRHQ149N8 1683 aa12□□□□□ -0.49
TRAPPC10-205ENST00000461889 EP400Q96L91 3159 aa12□□□□□ -0.49
TRAPPC10-205ENST00000461889 YY1P25490 414 aa11.99□□□□□ -0.49
TRAPPC10-205ENST00000461889 TROQ12816 1431 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC10-205ENST00000461889 PREX2Q70Z35 1606 aa11.97□□□□□ -0.49
TRAPPC10-205ENST00000461889 QTRT2Q9H974 415 aaKnown RBP11.97□□□□□ -0.49
TRAPPC10-205ENST00000461889 SCAF11Q99590 1463 aaKnown RBP11.96□□□□□ -0.49
TRAPPC10-205ENST00000461889 NGLY1Q96IV0 654 aa11.96□□□□□ -0.49
TRAPPC10-205ENST00000461889 CLIP1P30622 1438 aa11.95□□□□□ -0.5
TRAPPC10-205ENST00000461889 NHSL1Q5SYE7 1610 aa11.94□□□□□ -0.5
TRAPPC10-205ENST00000461889 NWD1Q149M9 1564 aa11.94□□□□□ -0.5
TRAPPC10-205ENST00000461889 INO80Q9ULG1 1556 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC10-205ENST00000461889 ABCC3O15438 1527 aa11.93□□□□□ -0.5
TRAPPC10-205ENST00000461889 KCNA6P17658 529 aa11.93□□□□□ -0.5
TRAPPC10-205ENST00000461889 RNF216Q9NWF9 866 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC10-205ENST00000461889 PROSER2Q86WR7 435 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC10-205ENST00000461889 AHDC1Q5TGY3 1603 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC10-205ENST00000461889 MSH6P52701 1360 aa11.92□□□□□ -0.5
TRAPPC10-205ENST00000461889 PRDM15P57071 1507 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC10-205ENST00000461889 ADGBQ8N7X0 1667 aa11.91□□□□□ -0.5
TRAPPC10-205ENST00000461889 LTKP29376 864 aa11.91□□□□□ -0.5
TRAPPC10-205ENST00000461889 TIAM1Q13009 1591 aa11.91□□□□□ -0.5
TRAPPC10-205ENST00000461889 ARHGAP23Q9P227 1491 aa11.9□□□□□ -0.5
TRAPPC10-205ENST00000461889 SLIT1O75093 1534 aa11.9□□□□□ -0.5
TRAPPC10-205ENST00000461889 TXNDC2Q86VQ3 553 aa11.89□□□□□ -0.51
TRAPPC10-205ENST00000461889 DIP2AQ14689 1571 aa11.88□□□□□ -0.51
TRAPPC10-205ENST00000461889 KIAA1107Q9UPP5 1409 aa11.88□□□□□ -0.51
TRAPPC10-205ENST00000461889 SYCP2Q9BX26 1530 aa11.88□□□□□ -0.51
TRAPPC10-205ENST00000461889 NKTRP30414 1462 aaKnown RBP11.88□□□□□ -0.51
TRAPPC10-205ENST00000461889 HNRNPMP52272 730 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRAPPC10-205ENST00000461889 WASHC2CQ9Y4E1 1318 aa11.86□□□□□ -0.51
TRAPPC10-205ENST00000461889 UBR1Q8IWV7 1749 aa11.86□□□□□ -0.51
TRAPPC10-205ENST00000461889 SENP3-EIF4A1A0A087X0R7 540 aa11.86□□□□□ -0.51
TRAPPC10-205ENST00000461889 HRCP23327 699 aa11.86□□□□□ -0.51
TRAPPC10-205ENST00000461889 DHX29Q7Z478 1369 aaKnown RBP11.86□□□□□ -0.51
TRAPPC10-205ENST00000461889 NCOA2Q15596 1464 aa11.86□□□□□ -0.51
TRAPPC10-205ENST00000461889 RANGAP1P46060 587 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC10-205ENST00000461889 CDC42BPAQ5VT25 1732 aa11.85□□□□□ -0.51
TRAPPC10-205ENST00000461889 BLMP54132 1417 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC10-205ENST00000461889 BCL9LQ86UU0 1499 aa11.84□□□□□ -0.51
TRAPPC10-205ENST00000461889 C8orf37Q96NL8 207 aa11.84□□□□□ -0.51
TRAPPC10-205ENST00000461889 EID1Q9Y6B2 187 aa11.83□□□□□ -0.52
TRAPPC10-205ENST00000461889 KDM5AP29375 1690 aaKnown RBP11.83□□□□□ -0.52
TRAPPC10-205ENST00000461889 FMN1Q68DA7 1419 aa11.83□□□□□ -0.52
TRAPPC10-205ENST00000461889 PLEKHH2Q8IVE3 1493 aa11.83□□□□□ -0.52
TRAPPC10-205ENST00000461889 KIF3BO15066 747 aa11.82□□□□□ -0.52
TRAPPC10-205ENST00000461889 ATP1B4Q9UN42 357 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC10-205ENST00000461889 RTEL1-TNFRSF6BF6WH68 1400 aa11.82□□□□□ -0.52
TRAPPC10-205ENST00000461889 SETD5Q9C0A6 1442 aa11.81□□□□□ -0.52
TRAPPC10-205ENST00000461889 NCOA3Q9Y6Q9 1424 aa11.81□□□□□ -0.52
TRAPPC10-205ENST00000461889 ZNF777Q9ULD5 760 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC10-205ENST00000461889 TRPC5Q9UL62 973 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC10-205ENST00000461889 ERVK-7P63135 1459 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms