RNA–Protein interactions for RNA: ENST00000461780.1

PPARGC1B-206, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 4

Gene PPARGC1B, Length 566 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-206ENST00000461780 FAM135AQ9P2D6 1515 aa24.68■■□□□ 1.54
PPARGC1B-206ENST00000461780 PZPP20742 1482 aa24.67■■□□□ 1.54
PPARGC1B-206ENST00000461780 KDM5DQ9BY66 1539 aa24.66■■□□□ 1.54
PPARGC1B-206ENST00000461780 FBXO31Q5XUX0 539 aaPredicted RBP24.64■■□□□ 1.54
PPARGC1B-206ENST00000461780 ALKQ9UM73 1620 aa24.64■■□□□ 1.53
PPARGC1B-206ENST00000461780 CAMSAP2Q08AD1 1489 aa24.64■■□□□ 1.53
PPARGC1B-206ENST00000461780 CCDC141Q6ZP82 1450 aa24.64■■□□□ 1.53
PPARGC1B-206ENST00000461780 UBAP1LF5GYI3 381 aa24.63■■□□□ 1.53
PPARGC1B-206ENST00000461780 VWDEQ8N2E2 1590 aa24.63■■□□□ 1.53
PPARGC1B-206ENST00000461780 NCOA2Q15596 1464 aa24.62■■□□□ 1.53
PPARGC1B-206ENST00000461780 ARHGEF5Q12774 1597 aa24.61■■□□□ 1.53
PPARGC1B-206ENST00000461780 TNRQ92752 1358 aa24.6■■□□□ 1.53
PPARGC1B-206ENST00000461780 CPS1P31327 1500 aa24.59■■□□□ 1.53
PPARGC1B-206ENST00000461780 DEPDC5O75140 1603 aa24.58■■□□□ 1.53
PPARGC1B-206ENST00000461780 MED14O60244 1454 aa24.58■■□□□ 1.52
PPARGC1B-206ENST00000461780 SHANK2Q9UPX8 1470 aa24.58■■□□□ 1.52
PPARGC1B-206ENST00000461780 RNF17Q9BXT8 1623 aaKnown RBP24.57■■□□□ 1.52
PPARGC1B-206ENST00000461780 STRCP1A6NGW2 1772 aa24.57■■□□□ 1.52
PPARGC1B-206ENST00000461780 KIF3BO15066 747 aa24.57■■□□□ 1.52
PPARGC1B-206ENST00000461780 MIA2Q96PC5 1412 aa24.54■■□□□ 1.52
PPARGC1B-206ENST00000461780 MROH1Q8NDA8 1641 aa24.53■■□□□ 1.52
PPARGC1B-206ENST00000461780 NLRP1Q9C000 1473 aa24.53■■□□□ 1.52
PPARGC1B-206ENST00000461780 MAST1Q9Y2H9 1570 aa24.53■■□□□ 1.52
PPARGC1B-206ENST00000461780 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.53■■□□□ 1.521e-7■■■■■ 39.2
PPARGC1B-206ENST00000461780 MED1Q15648 1581 aaPredicted RBP24.51■■□□□ 1.51
PPARGC1B-206ENST00000461780 UGGT1Q9NYU2 1555 aa24.51■■□□□ 1.51
PPARGC1B-206ENST00000461780 RSPH4AQ5TD94 716 aa24.51■■□□□ 1.51
PPARGC1B-206ENST00000461780 ABCC3O15438 1527 aa24.5■■□□□ 1.51
PPARGC1B-206ENST00000461780 IQGAP1P46940 1657 aa24.5■■□□□ 1.51
PPARGC1B-206ENST00000461780 ZC3H13Q5T200 1668 aaKnown RBP24.5■■□□□ 1.51
PPARGC1B-206ENST00000461780 HSPA1LP34931 641 aa24.48■■□□□ 1.51
PPARGC1B-206ENST00000461780 WASHC2CQ9Y4E1 1318 aa24.48■■□□□ 1.51
PPARGC1B-206ENST00000461780 EIF2AK4Q9P2K8 1649 aaKnown RBP24.47■■□□□ 1.51
PPARGC1B-206ENST00000461780 NPHP4O75161 1426 aaPredicted RBP24.46■■□□□ 1.51
PPARGC1B-206ENST00000461780 ANKLE2Q86XL3 938 aa24.44■■□□□ 1.5
PPARGC1B-206ENST00000461780 UBR1Q8IWV7 1749 aa24.44■■□□□ 1.5
PPARGC1B-206ENST00000461780 THEMISQ8N1K5 641 aaPredicted RBP24.43■■□□□ 1.5
PPARGC1B-206ENST00000461780 CEP152O94986 1710 aa24.43■■□□□ 1.5
PPARGC1B-206ENST00000461780 LRRC9Q6ZRR7 1453 aa24.43■■□□□ 1.5
PPARGC1B-206ENST00000461780 CFAP65Q6ZU64 1925 aaKnown RBP24.43■■□□□ 1.5
PPARGC1B-206ENST00000461780 ERVK-7P63135 1459 aa24.42■■□□□ 1.5
PPARGC1B-206ENST00000461780 LRRC7Q96NW7 1537 aa24.4■■□□□ 1.5
PPARGC1B-206ENST00000461780 XIRP1Q702N8 1843 aaKnown RBP24.4■■□□□ 1.5
PPARGC1B-206ENST00000461780 TOM1O60784 492 aa24.39■■□□□ 1.49
PPARGC1B-206ENST00000461780 PIP4K2BP78356 416 aa24.38■■□□□ 1.49
PPARGC1B-206ENST00000461780 SYNMO15061 1565 aa24.37■■□□□ 1.49
PPARGC1B-206ENST00000461780 MAP3K1Q13233 1512 aa24.35■■□□□ 1.49
PPARGC1B-206ENST00000461780 VPS8Q8N3P4 1428 aa24.35■■□□□ 1.49
PPARGC1B-206ENST00000461780 ARHGAP23Q9P227 1491 aa24.34■■□□□ 1.49
PPARGC1B-206ENST00000461780 TSPY4P0CV99 314 aa24.34■■□□□ 1.49
PPARGC1B-206ENST00000461780 TSPY10P0CW01 314 aa24.34■■□□□ 1.49
PPARGC1B-206ENST00000461780 KANK4Q5T7N3 995 aaPredicted RBP24.32■■□□□ 1.48
PPARGC1B-206ENST00000461780 SLIT1O75093 1534 aa24.31■■□□□ 1.48
PPARGC1B-206ENST00000461780 PRDM15P57071 1507 aaPredicted RBP24.31■■□□□ 1.48
PPARGC1B-206ENST00000461780 CROCC2H7BZ55 1655 aa24.31■■□□□ 1.48
PPARGC1B-206ENST00000461780 SCAF1Q9H7N4 1312 aaKnown RBP24.3■■□□□ 1.48
PPARGC1B-206ENST00000461780 DUOX2Q9NRD8 1548 aa24.3■■□□□ 1.48
PPARGC1B-206ENST00000461780 MYOM3Q5VTT5 1437 aa24.29■■□□□ 1.48
PPARGC1B-206ENST00000461780 ARHGAP31Q2M1Z3 1444 aa24.28■■□□□ 1.48
PPARGC1B-206ENST00000461780 SCAF11Q99590 1463 aaKnown RBP24.26■■□□□ 1.47
PPARGC1B-206ENST00000461780 LTKP29376 864 aa24.25■■□□□ 1.47
PPARGC1B-206ENST00000461780 PIK3C2BO00750 1634 aa24.24■■□□□ 1.47
PPARGC1B-206ENST00000461780 KDM5AP29375 1690 aaKnown RBP24.22■■□□□ 1.47
PPARGC1B-206ENST00000461780 ABCC5O15440 1437 aa24.21■■□□□ 1.47
PPARGC1B-206ENST00000461780 ERBINQ96RT1 1412 aa24.19■■□□□ 1.46
PPARGC1B-206ENST00000461780 PTPN23Q9H3S7 1636 aa24.17■■□□□ 1.46
PPARGC1B-206ENST00000461780 KIF15Q9NS87 1388 aa24.16■■□□□ 1.46
PPARGC1B-206ENST00000461780 TET3O43151 1660 aa24.16■■□□□ 1.46
PPARGC1B-206ENST00000461780 LOC105371045A0A1W2PR82 267 aa24.16■■□□□ 1.46
PPARGC1B-206ENST00000461780 LMTK2Q8IWU2 1503 aa24.15■■□□□ 1.46
PPARGC1B-206ENST00000461780 RGS17Q9UGC6 210 aaPredicted RBP24.15■■□□□ 1.46
PPARGC1B-206ENST00000461780 TMEM2Q9UHN6 1383 aa24.13■■□□□ 1.45
PPARGC1B-206ENST00000461780 TXNDC2Q86VQ3 553 aa24.12■■□□□ 1.45
PPARGC1B-206ENST00000461780 DAPK1P53355 1430 aa24.11■■□□□ 1.45
PPARGC1B-206ENST00000461780 EFCAB6Q5THR3 1501 aa24.08■■□□□ 1.45
PPARGC1B-206ENST00000461780 NOS1P29475 1434 aa24.08■■□□□ 1.44
PPARGC1B-206ENST00000461780 FAM135BQ49AJ0 1406 aa24.08■■□□□ 1.44
PPARGC1B-206ENST00000461780 RRP7BPQ9NSQ0 103 aa24.07■■□□□ 1.44
PPARGC1B-206ENST00000461780 NWD1Q149M9 1564 aa24.07■■□□□ 1.44
PPARGC1B-206ENST00000461780 FGD6Q6ZV73 1430 aa24.04■■□□□ 1.44
PPARGC1B-206ENST00000461780 IDI1Q13907 227 aa24.04■■□□□ 1.44
PPARGC1B-206ENST00000461780 PHF23Q9BUL5 403 aaPredicted RBP24.04■■□□□ 1.44
PPARGC1B-206ENST00000461780 SENP3Q9H4L4 574 aaPredicted RBP24.04■■□□□ 1.44
PPARGC1B-206ENST00000461780 ROBO1Q9Y6N7 1651 aa24.04■■□□□ 1.44
PPARGC1B-206ENST00000461780 MYO5BQ9ULV0 1848 aa24.03■■□□□ 1.44
PPARGC1B-206ENST00000461780 ADGRB3O60242 1522 aa24.02■■□□□ 1.44
PPARGC1B-206ENST00000461780 TMEM94Q12767 1356 aa24.02■■□□□ 1.44
PPARGC1B-206ENST00000461780 EID1Q9Y6B2 187 aa24■■□□□ 1.43
PPARGC1B-206ENST00000461780 CHD2O14647 1828 aaKnown RBP23.99■■□□□ 1.43
PPARGC1B-206ENST00000461780 KCNA6P17658 529 aa23.99■■□□□ 1.43
PPARGC1B-206ENST00000461780 ADGRL2O95490 1459 aa23.99■■□□□ 1.43
PPARGC1B-206ENST00000461780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.98■■□□□ 1.43
PPARGC1B-206ENST00000461780 NKTRP30414 1462 aaKnown RBP23.96■■□□□ 1.43
PPARGC1B-206ENST00000461780 ZFYVE9O95405 1425 aa23.95■■□□□ 1.42
PPARGC1B-206ENST00000461780 KANK1Q14678 1352 aa23.95■■□□□ 1.42
PPARGC1B-206ENST00000461780 ANKRD30AQ9BXX3 1397 aa23.94■■□□□ 1.42
PPARGC1B-206ENST00000461780 SLC26A8Q96RN1 970 aa23.94■■□□□ 1.42
PPARGC1B-206ENST00000461780 GCC2Q8IWJ2 1684 aa23.92■■□□□ 1.42
PPARGC1B-206ENST00000461780 POTEAQ6S8J7 498 aa23.92■■□□□ 1.42
PPARGC1B-206ENST00000461780 TMEM131LA2VDJ0 1609 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms