RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 ZMYM3Q14202 1370 aa16.16■□□□□ 0.18
TRAPPC12-213ENST00000461577 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.16■□□□□ 0.183e-6■■■■□ 26.4
TRAPPC12-213ENST00000461577 ITGAEP38570 1179 aa16.16■□□□□ 0.18
TRAPPC12-213ENST00000461577 NCOA1Q15788 1441 aa16.16■□□□□ 0.18
TRAPPC12-213ENST00000461577 ERBINQ96RT1 1412 aa16.16■□□□□ 0.18
TRAPPC12-213ENST00000461577 RNF17Q9BXT8 1623 aaKnown RBP16.16■□□□□ 0.18
TRAPPC12-213ENST00000461577 WASHC2CQ9Y4E1 1318 aa16.15■□□□□ 0.18
TRAPPC12-213ENST00000461577 KDM5DQ9BY66 1539 aa16.14■□□□□ 0.18
TRAPPC12-213ENST00000461577 FAM135AQ9P2D6 1515 aa16.14■□□□□ 0.18
TRAPPC12-213ENST00000461577 RRBP1Q9P2E9 1410 aaKnown RBP16.14■□□□□ 0.17
TRAPPC12-213ENST00000461577 SETD1BQ9UPS6 1966 aaKnown RBP16.14■□□□□ 0.17
TRAPPC12-213ENST00000461577 PREX1Q8TCU6 1659 aa16.13■□□□□ 0.17
TRAPPC12-213ENST00000461577 PTPRKQ15262 1439 aa16.12■□□□□ 0.17
TRAPPC12-213ENST00000461577 LMTK3Q96Q04 1460 aa16.1■□□□□ 0.17
TRAPPC12-213ENST00000461577 ZC3H13Q5T200 1668 aaKnown RBP16.1■□□□□ 0.17
TRAPPC12-213ENST00000461577 UHRF1BP1Q6BDS2 1440 aa16.1■□□□□ 0.17
TRAPPC12-213ENST00000461577 MROH1Q8NDA8 1641 aa16.09■□□□□ 0.17
TRAPPC12-213ENST00000461577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.09■□□□□ 0.171e-7■□□□□ 8.7
TRAPPC12-213ENST00000461577 ROCK1Q13464 1354 aa16.09■□□□□ 0.17
TRAPPC12-213ENST00000461577 NPATQ14207 1427 aa16.09■□□□□ 0.17
TRAPPC12-213ENST00000461577 CEP152O94986 1710 aa16.08■□□□□ 0.17
TRAPPC12-213ENST00000461577 KANK1Q14678 1352 aa16.08■□□□□ 0.16
TRAPPC12-213ENST00000461577 ANKRD50Q9ULJ7 1429 aa16.08■□□□□ 0.16
TRAPPC12-213ENST00000461577 ABCC3O15438 1527 aa16.08■□□□□ 0.16
TRAPPC12-213ENST00000461577 DEPDC5O75140 1603 aa16.07■□□□□ 0.16
TRAPPC12-213ENST00000461577 PRDM15P57071 1507 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC12-213ENST00000461577 HSPA2P54652 639 aa16.06■□□□□ 0.16
TRAPPC12-213ENST00000461577 PZPP20742 1482 aa16.05■□□□□ 0.16
TRAPPC12-213ENST00000461577 CAMSAP1Q5T5Y3 1602 aa16.04■□□□□ 0.16
TRAPPC12-213ENST00000461577 MYO3AQ8NEV4 1616 aa16.02■□□□□ 0.16
TRAPPC12-213ENST00000461577 FBXO31Q5XUX0 539 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC12-213ENST00000461577 CFAP65Q6ZU64 1925 aaKnown RBP16.02■□□□□ 0.15
TRAPPC12-213ENST00000461577 TNRQ92752 1358 aa16.01■□□□□ 0.15
TRAPPC12-213ENST00000461577 VWDEQ8N2E2 1590 aa15.99■□□□□ 0.15
TRAPPC12-213ENST00000461577 ZNF142P52746 1687 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC12-213ENST00000461577 UNC13BO14795 1591 aa15.98■□□□□ 0.15
TRAPPC12-213ENST00000461577 CEP170BQ9Y4F5 1589 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC12-213ENST00000461577 LMTK2Q8IWU2 1503 aa15.98■□□□□ 0.15
TRAPPC12-213ENST00000461577 ARHGAP31Q2M1Z3 1444 aa15.97■□□□□ 0.15
TRAPPC12-213ENST00000461577 ERVK-7P63135 1459 aa15.97■□□□□ 0.15
TRAPPC12-213ENST00000461577 SPATA31D1Q6ZQQ2 1576 aa15.96■□□□□ 0.15
TRAPPC12-213ENST00000461577 GCC2Q8IWJ2 1684 aa15.96■□□□□ 0.15
TRAPPC12-213ENST00000461577 A2ML1A8K2U0 1454 aa15.96■□□□□ 0.14
TRAPPC12-213ENST00000461577 NAIPQ13075 1403 aa15.94■□□□□ 0.14
TRAPPC12-213ENST00000461577 NLRP1Q9C000 1473 aa15.94■□□□□ 0.14
TRAPPC12-213ENST00000461577 EFCAB6Q5THR3 1501 aa15.94■□□□□ 0.14
TRAPPC12-213ENST00000461577 TET3O43151 1660 aa15.93■□□□□ 0.14
TRAPPC12-213ENST00000461577 NUP155O75694 1391 aa15.93■□□□□ 0.14
TRAPPC12-213ENST00000461577 IQGAP3Q86VI3 1631 aa15.92■□□□□ 0.14
TRAPPC12-213ENST00000461577 STRCQ7RTU9 1775 aa15.92■□□□□ 0.14
TRAPPC12-213ENST00000461577 HFM1A2PYH4 1435 aa15.92■□□□□ 0.14
TRAPPC12-213ENST00000461577 DMRT2Q9Y5R5 561 aa15.91■□□□□ 0.14
TRAPPC12-213ENST00000461577 UGGT1Q9NYU2 1555 aa15.9■□□□□ 0.14
TRAPPC12-213ENST00000461577 THEMISQ8N1K5 641 aaPredicted RBP15.89■□□□□ 0.13
TRAPPC12-213ENST00000461577 RPRD2Q5VT52 1461 aaKnown RBP15.89■□□□□ 0.13
TRAPPC12-213ENST00000461577 PLA2R1Q13018 1463 aa15.88■□□□□ 0.13
TRAPPC12-213ENST00000461577 PKD2Q13563 968 aa15.87■□□□□ 0.13
TRAPPC12-213ENST00000461577 TRIM52Q96A61 297 aa15.87■□□□□ 0.13
TRAPPC12-213ENST00000461577 NCKAP5LQ9HCH0 1330 aa15.87■□□□□ 0.13
TRAPPC12-213ENST00000461577 E9PCH4 1651 aa15.86■□□□□ 0.13
TRAPPC12-213ENST00000461577 STAG3Q9UJ98 1225 aa15.86■□□□□ 0.13
TRAPPC12-213ENST00000461577 NOS1P29475 1434 aa15.85■□□□□ 0.13
TRAPPC12-213ENST00000461577 SYNMO15061 1565 aa15.85■□□□□ 0.13
TRAPPC12-213ENST00000461577 UBR1Q8IWV7 1749 aa15.85■□□□□ 0.13
TRAPPC12-213ENST00000461577 PTPRTO14522 1441 aa15.85■□□□□ 0.13
TRAPPC12-213ENST00000461577 PIK3C2BO00750 1634 aa15.84■□□□□ 0.13
TRAPPC12-213ENST00000461577 POLR1AO95602 1720 aaPredicted RBP15.83■□□□□ 0.13
TRAPPC12-213ENST00000461577 IDI1Q13907 227 aa15.83■□□□□ 0.12
TRAPPC12-213ENST00000461577 ANKLE2Q86XL3 938 aa15.83■□□□□ 0.12
TRAPPC12-213ENST00000461577 SLC52A1Q9NWF4 448 aa15.83■□□□□ 0.12
TRAPPC12-213ENST00000461577 SETD5Q9C0A6 1442 aa15.8■□□□□ 0.12
TRAPPC12-213ENST00000461577 KDM5AP29375 1690 aaKnown RBP15.79■□□□□ 0.12
TRAPPC12-213ENST00000461577 ADGRB3O60242 1522 aa15.78■□□□□ 0.12
TRAPPC12-213ENST00000461577 ACIN1Q9UKV3 1341 aaKnown RBP15.78■□□□□ 0.12
TRAPPC12-213ENST00000461577 SPHKAPQ2M3C7 1700 aa15.78■□□□□ 0.12
TRAPPC12-213ENST00000461577 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
TRAPPC12-213ENST00000461577 CHGAP10645 457 aaKnown RBP15.77■□□□□ 0.12
TRAPPC12-213ENST00000461577 EID1Q9Y6B2 187 aa15.77■□□□□ 0.12
TRAPPC12-213ENST00000461577 NEURL4Q96JN8 1562 aa15.77■□□□□ 0.11
TRAPPC12-213ENST00000461577 TXNDC2Q86VQ3 553 aa15.76■□□□□ 0.11
TRAPPC12-213ENST00000461577 SLIT1O75093 1534 aa15.76■□□□□ 0.11
TRAPPC12-213ENST00000461577 MYO5BQ9ULV0 1848 aa15.75■□□□□ 0.11
TRAPPC12-213ENST00000461577 SCAF11Q99590 1463 aaKnown RBP15.75■□□□□ 0.11
TRAPPC12-213ENST00000461577 ARHGAP23Q9P227 1491 aa15.75■□□□□ 0.11
TRAPPC12-213ENST00000461577 NPHP4O75161 1426 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC12-213ENST00000461577 TMEM2Q9UHN6 1383 aa15.75■□□□□ 0.11
TRAPPC12-213ENST00000461577 RAB3GAP2Q9H2M9 1393 aa15.74■□□□□ 0.11
TRAPPC12-213ENST00000461577 IQGAP1P46940 1657 aa15.73■□□□□ 0.11
TRAPPC12-213ENST00000461577 MED14O60244 1454 aa15.73■□□□□ 0.11
TRAPPC12-213ENST00000461577 TMEM131LA2VDJ0 1609 aa15.73■□□□□ 0.11
TRAPPC12-213ENST00000461577 LTKP29376 864 aa15.72■□□□□ 0.11
TRAPPC12-213ENST00000461577 MPHOSPH9Q99550 1183 aa15.72■□□□□ 0.11
TRAPPC12-213ENST00000461577 HDGFP51858 240 aaKnown RBP15.71■□□□□ 0.11
TRAPPC12-213ENST00000461577 TRPM2O94759 1503 aa15.71■□□□□ 0.11
TRAPPC12-213ENST00000461577 ZNF335Q9H4Z2 1342 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC12-213ENST00000461577 CLTCL1P53675 1640 aa15.69■□□□□ 0.1
TRAPPC12-213ENST00000461577 CERKQ8TCT0 537 aa15.69■□□□□ 0.1
TRAPPC12-213ENST00000461577 RIMS2Q9UQ26 1411 aa15.68■□□□□ 0.1
TRAPPC12-213ENST00000461577 KIF1BO60333 1816 aa15.68■□□□□ 0.1
TRAPPC12-213ENST00000461577 PPP1R15AO75807 674 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms