RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 CAMSAP1Q5T5Y3 1602 aa27.74■■■□□ 2.03
COL1A2-202ENST00000461525 MAST1Q9Y2H9 1570 aa27.73■■■□□ 2.03
COL1A2-202ENST00000461525 MYO3AQ8NEV4 1616 aa27.73■■■□□ 2.03
COL1A2-202ENST00000461525 CEP170BQ9Y4F5 1589 aaPredicted RBP27.71■■■□□ 2.03
COL1A2-202ENST00000461525 ZNF142P52746 1687 aaPredicted RBP27.68■■■□□ 2.02
COL1A2-202ENST00000461525 PZPP20742 1482 aa27.68■■■□□ 2.02
COL1A2-202ENST00000461525 FBXO31Q5XUX0 539 aaPredicted RBP27.67■■■□□ 2.02
COL1A2-202ENST00000461525 TNRQ92752 1358 aa27.67■■■□□ 2.02
COL1A2-202ENST00000461525 PLA2R1Q13018 1463 aa27.67■■■□□ 2.02
COL1A2-202ENST00000461525 NCKAP5LQ9HCH0 1330 aa27.67■■■□□ 2.02
COL1A2-202ENST00000461525 A2ML1A8K2U0 1454 aa27.65■■■□□ 2.02
COL1A2-202ENST00000461525 PKD2Q13563 968 aa27.64■■■□□ 2.02
COL1A2-202ENST00000461525 FGD6Q6ZV73 1430 aa27.62■■■□□ 2.01
COL1A2-202ENST00000461525 SHANK2Q9UPX8 1470 aa27.62■■■□□ 2.01
COL1A2-202ENST00000461525 ABCC5O15440 1437 aa27.61■■■□□ 2.01
COL1A2-202ENST00000461525 RNF17Q9BXT8 1623 aaKnown RBP27.61■■■□□ 2.01
COL1A2-202ENST00000461525 PTPN23Q9H3S7 1636 aa27.61■■■□□ 2.01
COL1A2-202ENST00000461525 TCOF1Q13428 1488 aaKnown RBP27.61■■■□□ 2.01
COL1A2-202ENST00000461525 DUOX2Q9NRD8 1548 aa27.6■■■□□ 2.01
COL1A2-202ENST00000461525 KIF15Q9NS87 1388 aa27.6■■■□□ 2.01
COL1A2-202ENST00000461525 EIF2AK4Q9P2K8 1649 aaKnown RBP27.59■■■□□ 2.01
COL1A2-202ENST00000461525 ABCC3O15438 1527 aa27.57■■■□□ 2
COL1A2-202ENST00000461525 DAPK1P53355 1430 aa27.57■■■□□ 2
COL1A2-202ENST00000461525 LTBP4Q8N2S1 1624 aa27.56■■■□□ 2
COL1A2-202ENST00000461525 DNMT1P26358 1616 aaKnown RBP27.56■■■□□ 2
COL1A2-202ENST00000461525 RRP7BPQ9NSQ0 103 aa27.55■■■□□ 2
COL1A2-202ENST00000461525 NLRP1Q9C000 1473 aa27.53■■■□□ 2
COL1A2-202ENST00000461525 ERBINQ96RT1 1412 aa27.52■■■□□ 2
COL1A2-202ENST00000461525 ZC3H13Q5T200 1668 aaKnown RBP27.52■■■□□ 2
COL1A2-202ENST00000461525 MROH1Q8NDA8 1641 aa27.52■■■□□ 2
COL1A2-202ENST00000461525 ZNF335Q9H4Z2 1342 aaPredicted RBP27.51■■□□□ 1.99
COL1A2-202ENST00000461525 CROCC2H7BZ55 1655 aa27.51■■□□□ 1.99
COL1A2-202ENST00000461525 THEMISQ8N1K5 641 aaPredicted RBP27.49■■□□□ 1.99
COL1A2-202ENST00000461525 IQSEC2Q5JU85 1478 aa27.48■■□□□ 1.99
COL1A2-202ENST00000461525 ANKRD30AQ9BXX3 1397 aa27.48■■□□□ 1.99
COL1A2-202ENST00000461525 ERVK-7P63135 1459 aa27.47■■□□□ 1.99
COL1A2-202ENST00000461525 CHIC2Q9UKJ5 165 aa27.47■■□□□ 1.99
COL1A2-202ENST00000461525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.47■■□□□ 1.99
COL1A2-202ENST00000461525 SPATA31D1Q6ZQQ2 1576 aa27.46■■□□□ 1.99
COL1A2-202ENST00000461525 UGGT1Q9NYU2 1555 aa27.46■■□□□ 1.99
COL1A2-202ENST00000461525 PRDM15P57071 1507 aaPredicted RBP27.45■■□□□ 1.98
COL1A2-202ENST00000461525 ANKLE2Q86XL3 938 aa27.44■■□□□ 1.98
COL1A2-202ENST00000461525 FAM50AQ14320 339 aaKnown RBP27.43■■□□□ 1.98
COL1A2-202ENST00000461525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.43■■□□□ 1.98
COL1A2-202ENST00000461525 KANK1Q14678 1352 aa27.4■■□□□ 1.98
COL1A2-202ENST00000461525 ARHGAP31Q2M1Z3 1444 aa27.4■■□□□ 1.98
COL1A2-202ENST00000461525 NEURL4Q96JN8 1562 aa27.39■■□□□ 1.98
COL1A2-202ENST00000461525 CEP152O94986 1710 aa27.39■■□□□ 1.98
COL1A2-202ENST00000461525 POLR1AO95602 1720 aaPredicted RBP27.36■■□□□ 1.97
COL1A2-202ENST00000461525 ADGRL2O95490 1459 aa27.36■■□□□ 1.97
COL1A2-202ENST00000461525 DEPDC5O75140 1603 aa27.34■■□□□ 1.97
COL1A2-202ENST00000461525 NPHP4O75161 1426 aaPredicted RBP27.34■■□□□ 1.97
COL1A2-202ENST00000461525 MED14O60244 1454 aa27.32■■□□□ 1.96
COL1A2-202ENST00000461525 UBAP1LF5GYI3 381 aa27.3■■□□□ 1.96
COL1A2-202ENST00000461525 LMTK2Q8IWU2 1503 aa27.29■■□□□ 1.96
COL1A2-202ENST00000461525 CPS1P31327 1500 aa27.27■■□□□ 1.96
COL1A2-202ENST00000461525 VWDEQ8N2E2 1590 aa27.26■■□□□ 1.96
COL1A2-202ENST00000461525 ANKRD50Q9ULJ7 1429 aa27.26■■□□□ 1.95
COL1A2-202ENST00000461525 UBR1Q8IWV7 1749 aa27.22■■□□□ 1.95
COL1A2-202ENST00000461525 SCAF11Q99590 1463 aaKnown RBP27.22■■□□□ 1.95
COL1A2-202ENST00000461525 STAG3Q9UJ98 1225 aa27.21■■□□□ 1.95
COL1A2-202ENST00000461525 IQGAP1P46940 1657 aa27.21■■□□□ 1.95
COL1A2-202ENST00000461525 ARHGAP23Q9P227 1491 aa27.2■■□□□ 1.95
COL1A2-202ENST00000461525 CFAP65Q6ZU64 1925 aaKnown RBP27.2■■□□□ 1.95
COL1A2-202ENST00000461525 EFCAB6Q5THR3 1501 aa27.2■■□□□ 1.94
COL1A2-202ENST00000461525 TXNDC2Q86VQ3 553 aa27.19■■□□□ 1.94
COL1A2-202ENST00000461525 SLIT1O75093 1534 aa27.19■■□□□ 1.94
COL1A2-202ENST00000461525 EID1Q9Y6B2 187 aa27.18■■□□□ 1.94
COL1A2-202ENST00000461525 LTKP29376 864 aa27.17■■□□□ 1.94
COL1A2-202ENST00000461525 NOS1P29475 1434 aa27.16■■□□□ 1.94
COL1A2-202ENST00000461525 IDI1Q13907 227 aa27.16■■□□□ 1.94
COL1A2-202ENST00000461525 ROCK1Q13464 1354 aa27.15■■□□□ 1.94
COL1A2-202ENST00000461525 TMEM2Q9UHN6 1383 aa27.15■■□□□ 1.94
COL1A2-202ENST00000461525 PPARGC1BQ86YN6 1023 aaKnown RBP27.15■■□□□ 1.94
COL1A2-202ENST00000461525 PIK3C2BO00750 1634 aa27.15■■□□□ 1.94
COL1A2-202ENST00000461525 TOM1O60784 492 aa27.13■■□□□ 1.93
COL1A2-202ENST00000461525 SYNMO15061 1565 aa27.13■■□□□ 1.93
COL1A2-202ENST00000461525 RPRD2Q5VT52 1461 aaKnown RBP27.12■■□□□ 1.93
COL1A2-202ENST00000461525 DISP3Q9P2K9 1392 aa27.11■■□□□ 1.93
COL1A2-202ENST00000461525 SLC52A1Q9NWF4 448 aa27.11■■□□□ 1.93
COL1A2-202ENST00000461525 SCAF1Q9H7N4 1312 aaKnown RBP27.11■■□□□ 1.93
COL1A2-202ENST00000461525 ITGAEP38570 1179 aa27.1■■□□□ 1.93
COL1A2-202ENST00000461525 PIP4K2BP78356 416 aa27.08■■□□□ 1.93
COL1A2-202ENST00000461525 KDM5AP29375 1690 aaKnown RBP27.06■■□□□ 1.92
COL1A2-202ENST00000461525 ADGRB3O60242 1522 aa27.06■■□□□ 1.92
COL1A2-202ENST00000461525 LRRC7Q96NW7 1537 aa27.06■■□□□ 1.92
COL1A2-202ENST00000461525 UNC13BO14795 1591 aa27.05■■□□□ 1.92
COL1A2-202ENST00000461525 TET3O43151 1660 aa27.05■■□□□ 1.92
COL1A2-202ENST00000461525 STRCP1A6NGW2 1772 aa27■■□□□ 1.91
COL1A2-202ENST00000461525 NUP155O75694 1391 aa26.98■■□□□ 1.91
COL1A2-202ENST00000461525 HSPA1LP34931 641 aa26.98■■□□□ 1.91
COL1A2-202ENST00000461525 GCC2Q8IWJ2 1684 aa26.96■■□□□ 1.91
COL1A2-202ENST00000461525 SLC26A8Q96RN1 970 aa26.95■■□□□ 1.9
COL1A2-202ENST00000461525 IQGAP3Q86VI3 1631 aa26.94■■□□□ 1.9
COL1A2-202ENST00000461525 ALKQ9UM73 1620 aa26.94■■□□□ 1.9
COL1A2-202ENST00000461525 RRBP1Q9P2E9 1410 aaKnown RBP26.93■■□□□ 1.9
COL1A2-202ENST00000461525 BCANQ96GW7 911 aa26.93■■□□□ 1.9
COL1A2-202ENST00000461525 CHGAP10645 457 aaKnown RBP26.92■■□□□ 1.9
COL1A2-202ENST00000461525 ZFYVE9O95405 1425 aa26.91■■□□□ 1.9
COL1A2-202ENST00000461525 PPP1R15AO75807 674 aaPredicted RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms