RNA–Protein interactions for RNA: ENST00000461434.1

PSMD4-207, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 801 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-207ENST00000461434 RTEL1-TNFRSF6BF6WH68 1400 aa16.99■□□□□ 0.31
PSMD4-207ENST00000461434 ATXN8OSP0DMR3 200 aa16.99■□□□□ 0.31
PSMD4-207ENST00000461434 KIF3BO15066 747 aa16.98■□□□□ 0.31
PSMD4-207ENST00000461434 DHX29Q7Z478 1369 aaKnown RBP16.98■□□□□ 0.31
PSMD4-207ENST00000461434 STRCQ7RTU9 1775 aa16.97■□□□□ 0.31
PSMD4-207ENST00000461434 MAP3K1Q13233 1512 aa16.97■□□□□ 0.31
PSMD4-207ENST00000461434 TSPY4P0CV99 314 aa16.97■□□□□ 0.31
PSMD4-207ENST00000461434 TSPY10P0CW01 314 aa16.97■□□□□ 0.31
PSMD4-207ENST00000461434 FBXO41Q8TF61 875 aa16.97■□□□□ 0.31
PSMD4-207ENST00000461434 ARHGEF5Q12774 1597 aa16.97■□□□□ 0.31
PSMD4-207ENST00000461434 MYOM3Q5VTT5 1437 aa16.96■□□□□ 0.3
PSMD4-207ENST00000461434 RSPH4AQ5TD94 716 aa16.95■□□□□ 0.3
PSMD4-207ENST00000461434 NPATQ14207 1427 aa16.94■□□□□ 0.3
PSMD4-207ENST00000461434 MYO3AQ8NEV4 1616 aa16.92■□□□□ 0.3
PSMD4-207ENST00000461434 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
PSMD4-207ENST00000461434 CAMSAP1Q5T5Y3 1602 aa16.91■□□□□ 0.3
PSMD4-207ENST00000461434 MIA2Q96PC5 1412 aa16.9■□□□□ 0.3
PSMD4-207ENST00000461434 CERKQ8TCT0 537 aa16.9■□□□□ 0.3
PSMD4-207ENST00000461434 NCOA1Q15788 1441 aa16.89■□□□□ 0.29
PSMD4-207ENST00000461434 WASHC2CQ9Y4E1 1318 aa16.89■□□□□ 0.29
PSMD4-207ENST00000461434 KDM5DQ9BY66 1539 aa16.88■□□□□ 0.29
PSMD4-207ENST00000461434 MAST1Q9Y2H9 1570 aa16.88■□□□□ 0.29
PSMD4-207ENST00000461434 PTPN23Q9H3S7 1636 aa16.88■□□□□ 0.29
PSMD4-207ENST00000461434 CEP170BQ9Y4F5 1589 aaPredicted RBP16.87■□□□□ 0.29
PSMD4-207ENST00000461434 FBXO31Q5XUX0 539 aaPredicted RBP16.87■□□□□ 0.29
PSMD4-207ENST00000461434 NCKAP5LQ9HCH0 1330 aa16.87■□□□□ 0.29
PSMD4-207ENST00000461434 ZNF142P52746 1687 aaPredicted RBP16.86■□□□□ 0.29
PSMD4-207ENST00000461434 TNRQ92752 1358 aa16.84■□□□□ 0.29
PSMD4-207ENST00000461434 PTPRTO14522 1441 aa16.84■□□□□ 0.29
PSMD4-207ENST00000461434 CROCC2H7BZ55 1655 aa16.83■□□□□ 0.28
PSMD4-207ENST00000461434 FGD6Q6ZV73 1430 aa16.83■□□□□ 0.28
PSMD4-207ENST00000461434 PZPP20742 1482 aa16.82■□□□□ 0.28
PSMD4-207ENST00000461434 ABCC5O15440 1437 aa16.82■□□□□ 0.28
PSMD4-207ENST00000461434 RTN4Q9NQC3 1192 aaKnown RBP16.82■□□□□ 0.28
PSMD4-207ENST00000461434 RRP7BPQ9NSQ0 103 aa16.82■□□□□ 0.28
PSMD4-207ENST00000461434 RNF17Q9BXT8 1623 aaKnown RBP16.81■□□□□ 0.28
PSMD4-207ENST00000461434 A2ML1A8K2U0 1454 aa16.81■□□□□ 0.28
PSMD4-207ENST00000461434 KIF15Q9NS87 1388 aa16.81■□□□□ 0.28
PSMD4-207ENST00000461434 CHIC2Q9UKJ5 165 aa16.81■□□□□ 0.28
PSMD4-207ENST00000461434 FAM135AQ9P2D6 1515 aa16.8■□□□□ 0.28
PSMD4-207ENST00000461434 DAPK1P53355 1430 aa16.8■□□□□ 0.28
PSMD4-207ENST00000461434 CEP152O94986 1710 aa16.8■□□□□ 0.28
PSMD4-207ENST00000461434 EIF2AK4Q9P2K8 1649 aaKnown RBP16.8■□□□□ 0.28
PSMD4-207ENST00000461434 ABCC3O15438 1527 aa16.8■□□□□ 0.28
PSMD4-207ENST00000461434 DUOX2Q9NRD8 1548 aa16.8■□□□□ 0.28
PSMD4-207ENST00000461434 DNMT1P26358 1616 aaKnown RBP16.79■□□□□ 0.28
PSMD4-207ENST00000461434 CFAP65Q6ZU64 1925 aaKnown RBP16.79■□□□□ 0.28
PSMD4-207ENST00000461434 FAM50AQ14320 339 aaKnown RBP16.78■□□□□ 0.28
PSMD4-207ENST00000461434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.285e-10■■□□□ 13.8
PSMD4-207ENST00000461434 PLA2R1Q13018 1463 aa16.78■□□□□ 0.28
PSMD4-207ENST00000461434 SHANK2Q9UPX8 1470 aa16.78■□□□□ 0.28
PSMD4-207ENST00000461434 PKD2Q13563 968 aa16.77■□□□□ 0.28
PSMD4-207ENST00000461434 TCOF1Q13428 1488 aaKnown RBP16.77■□□□□ 0.28
PSMD4-207ENST00000461434 MROH1Q8NDA8 1641 aa16.77■□□□□ 0.27
PSMD4-207ENST00000461434 ZC3H13Q5T200 1668 aaKnown RBP16.76■□□□□ 0.27
PSMD4-207ENST00000461434 FKBP8Q14318 412 aa16.76■□□□□ 0.27
PSMD4-207ENST00000461434 ZNF335Q9H4Z2 1342 aaPredicted RBP16.75■□□□□ 0.27
PSMD4-207ENST00000461434 LTBP4Q8N2S1 1624 aa16.74■□□□□ 0.27
PSMD4-207ENST00000461434 AMER1Q5JTC6 1135 aaPredicted RBP16.74■□□□□ 0.27
PSMD4-207ENST00000461434 PPARGC1BQ86YN6 1023 aaKnown RBP16.73■□□□□ 0.27
PSMD4-207ENST00000461434 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.73■□□□□ 0.27
PSMD4-207ENST00000461434 ERBINQ96RT1 1412 aa16.72■□□□□ 0.27
PSMD4-207ENST00000461434 POLR1AO95602 1720 aaPredicted RBP16.72■□□□□ 0.27
PSMD4-207ENST00000461434 ANKRD30AQ9BXX3 1397 aa16.72■□□□□ 0.27
PSMD4-207ENST00000461434 ERVK-7P63135 1459 aa16.72■□□□□ 0.27
PSMD4-207ENST00000461434 UGGT1Q9NYU2 1555 aa16.72■□□□□ 0.27
PSMD4-207ENST00000461434 NLRP1Q9C000 1473 aa16.71■□□□□ 0.27
PSMD4-207ENST00000461434 SPATA31D1Q6ZQQ2 1576 aa16.7■□□□□ 0.26
PSMD4-207ENST00000461434 PRDM15P57071 1507 aaPredicted RBP16.7■□□□□ 0.26
PSMD4-207ENST00000461434 NEURL4Q96JN8 1562 aa16.68■□□□□ 0.26
PSMD4-207ENST00000461434 KANK1Q14678 1352 aa16.68■□□□□ 0.26
PSMD4-207ENST00000461434 ANKLE2Q86XL3 938 aa16.68■□□□□ 0.26
PSMD4-207ENST00000461434 THEMISQ8N1K5 641 aaPredicted RBP16.68■□□□□ 0.26
PSMD4-207ENST00000461434 DEPDC5O75140 1603 aa16.66■□□□□ 0.26
PSMD4-207ENST00000461434 ITGAEP38570 1179 aa16.64■□□□□ 0.25
PSMD4-207ENST00000461434 NPHP4O75161 1426 aaPredicted RBP16.63■□□□□ 0.25
PSMD4-207ENST00000461434 ADGRL2O95490 1459 aa16.63■□□□□ 0.25
PSMD4-207ENST00000461434 UBR1Q8IWV7 1749 aa16.62■□□□□ 0.25
PSMD4-207ENST00000461434 UBAP1LF5GYI3 381 aa16.62■□□□□ 0.25
PSMD4-207ENST00000461434 IQSEC2Q5JU85 1478 aa16.61■□□□□ 0.25
PSMD4-207ENST00000461434 ATF5Q9Y2D1 282 aaPredicted RBP16.61■□□□□ 0.25
PSMD4-207ENST00000461434 IQGAP1P46940 1657 aa16.61■□□□□ 0.25
PSMD4-207ENST00000461434 ARHGAP31Q2M1Z3 1444 aa16.61■□□□□ 0.25
PSMD4-207ENST00000461434 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
PSMD4-207ENST00000461434 STAG3Q9UJ98 1225 aa16.6■□□□□ 0.25
PSMD4-207ENST00000461434 ANKRD50Q9ULJ7 1429 aa16.6■□□□□ 0.25
PSMD4-207ENST00000461434 PIK3C2BO00750 1634 aa16.59■□□□□ 0.25
PSMD4-207ENST00000461434 VWDEQ8N2E2 1590 aa16.58■□□□□ 0.24
PSMD4-207ENST00000461434 LMTK2Q8IWU2 1503 aa16.57■□□□□ 0.24
PSMD4-207ENST00000461434 EFCAB6Q5THR3 1501 aa16.56■□□□□ 0.24
PSMD4-207ENST00000461434 MED14O60244 1454 aa16.56■□□□□ 0.24
PSMD4-207ENST00000461434 SCAF11Q99590 1463 aaKnown RBP16.56■□□□□ 0.24
PSMD4-207ENST00000461434 TXNDC2Q86VQ3 553 aa16.56■□□□□ 0.24
PSMD4-207ENST00000461434 CPS1P31327 1500 aa16.55■□□□□ 0.24
PSMD4-207ENST00000461434 SLC24A1O60721 1099 aa16.55■□□□□ 0.24
PSMD4-207ENST00000461434 SYNMO15061 1565 aa16.55■□□□□ 0.24
PSMD4-207ENST00000461434 LTKP29376 864 aa16.54■□□□□ 0.24
PSMD4-207ENST00000461434 PIP4K2BP78356 416 aa16.54■□□□□ 0.24
PSMD4-207ENST00000461434 IDI1Q13907 227 aa16.54■□□□□ 0.24
PSMD4-207ENST00000461434 EID1Q9Y6B2 187 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms