RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 SMYD5Q6GMV2 418 aa6.59□□□□□ -1.35
VCL-203ENST00000461383 SEMA3EO15041 775 aa6.58□□□□□ -1.36
VCL-203ENST00000461383 BHMG1C9JSJ3 638 aaPredicted RBP6.57□□□□□ -1.36
VCL-203ENST00000461383 PTPREP23469 700 aa6.57□□□□□ -1.36
VCL-203ENST00000461383 CAMK2BQ13554 666 aa6.57□□□□□ -1.36
VCL-203ENST00000461383 ZBED2Q9BTP6 218 aa6.57□□□□□ -1.36
VCL-203ENST00000461383 EMILIN3Q9NT22 766 aa6.57□□□□□ -1.36
VCL-203ENST00000461383 ZDHHC16Q969W1 377 aa6.56□□□□□ -1.36
VCL-203ENST00000461383 PLA2G2EQ9NZK7 142 aa6.56□□□□□ -1.36
VCL-203ENST00000461383 TESPA1A2RU30 521 aaPredicted RBP6.55□□□□□ -1.36
VCL-203ENST00000461383 MAP3K9P80192 1104 aa6.54□□□□□ -1.36
VCL-203ENST00000461383 ADAM33Q9BZ11 813 aa6.54□□□□□ -1.36
VCL-203ENST00000461383 PPP1R3GB7ZBB8 358 aa6.53□□□□□ -1.36
VCL-203ENST00000461383 ZC3H15Q8WU90 426 aaKnown RBP6.53□□□□□ -1.36
VCL-203ENST00000461383 KCTD12Q96CX2 325 aaKnown RBP6.53□□□□□ -1.36
VCL-203ENST00000461383 PHF14O94880 888 aa6.52□□□□□ -1.37
VCL-203ENST00000461383 IFFO2Q5TF58 517 aa6.52□□□□□ -1.37
VCL-203ENST00000461383 FBXW7Q969H0 707 aa6.52□□□□□ -1.37
VCL-203ENST00000461383 STAC3Q96MF2 364 aa6.52□□□□□ -1.37
VCL-203ENST00000461383 PCDHGA10Q9Y5H3 936 aa6.52□□□□□ -1.37
VCL-203ENST00000461383 ARIH1Q9Y4X5 557 aaPredicted RBP6.51□□□□□ -1.37
VCL-203ENST00000461383 TMEM132AQ24JP5 1023 aa6.5□□□□□ -1.37
VCL-203ENST00000461383 TYW1BQ6NUM6 668 aa6.5□□□□□ -1.37
VCL-203ENST00000461383 THSD4Q6ZMP0 1018 aa6.5□□□□□ -1.37
VCL-203ENST00000461383 NBPF3Q9H094 633 aa6.5□□□□□ -1.37
VCL-203ENST00000461383 EPAS1Q99814 870 aa6.49□□□□□ -1.37
VCL-203ENST00000461383 ONECUT3O60422 494 aaPredicted RBP6.48□□□□□ -1.37
VCL-203ENST00000461383 MRPL50Q8N5N7 158 aaKnown RBP6.48□□□□□ -1.37
VCL-203ENST00000461383 SLC24A3Q9HC58 644 aa6.48□□□□□ -1.37
VCL-203ENST00000461383 RABGEF1Q9UJ41 708 aa6.48□□□□□ -1.37
VCL-203ENST00000461383 GTF3C3Q9Y5Q9 886 aa6.48□□□□□ -1.37
VCL-203ENST00000461383 DPYSL4O14531 572 aa6.47□□□□□ -1.37
VCL-203ENST00000461383 NEUROD2Q15784 382 aa6.47□□□□□ -1.37
VCL-203ENST00000461383 SPDYE16A6NNV3 312 aaPredicted RBP6.46□□□□□ -1.38
VCL-203ENST00000461383 COL9A1P20849 921 aa6.46□□□□□ -1.38
VCL-203ENST00000461383 LAPTM4BQ86VI4 370 aa6.46□□□□□ -1.38
VCL-203ENST00000461383 GPIHBP1Q8IV16 184 aa6.46□□□□□ -1.38
VCL-203ENST00000461383 WNT2BQ93097 391 aa6.46□□□□□ -1.38
VCL-203ENST00000461383 RGS20O76081 388 aa6.45□□□□□ -1.38
VCL-203ENST00000461383 MLLT3P42568 568 aaPredicted RBP6.45□□□□□ -1.38
VCL-203ENST00000461383 PDIA6Q15084 440 aa6.45□□□□□ -1.38
VCL-203ENST00000461383 ZMYND10O75800 440 aa6.44□□□□□ -1.38
VCL-203ENST00000461383 BRPF1P55201 1214 aaPredicted RBP6.44□□□□□ -1.38
VCL-203ENST00000461383 RBM26Q5T8P6 1007 aaKnown RBP6.44□□□□□ -1.38
VCL-203ENST00000461383 KRI1Q8N9T8 703 aaKnown RBP6.44□□□□□ -1.38
VCL-203ENST00000461383 GOLGA8CPA6NN73 597 aa6.43□□□□□ -1.38
VCL-203ENST00000461383 PTPN5P54829 565 aa6.43□□□□□ -1.38
VCL-203ENST00000461383 PROX2Q3B8N5 592 aa6.43□□□□□ -1.38
VCL-203ENST00000461383 C6orf132Q5T0Z8 1188 aa6.42□□□□□ -1.38
VCL-203ENST00000461383 ERICH6Q7L0X2 663 aa6.42□□□□□ -1.38
VCL-203ENST00000461383 A0A0G2JS52 829 aa6.41□□□□□ -1.38
VCL-203ENST00000461383 ITGBL1O95965 494 aaPredicted RBP6.41□□□□□ -1.38
VCL-203ENST00000461383 EN1Q05925 392 aaPredicted RBP6.41□□□□□ -1.38
VCL-203ENST00000461383 BARGINQ6ZT62 677 aa6.41□□□□□ -1.38
VCL-203ENST00000461383 NYAP1Q6ZVC0 841 aa6.41□□□□□ -1.38
VCL-203ENST00000461383 ANKK1Q8NFD2 765 aa6.41□□□□□ -1.38
VCL-203ENST00000461383 SOWAHBA6NEL2 793 aa6.4□□□□□ -1.38
VCL-203ENST00000461383 GRXCR2A6NFK2 248 aa6.4□□□□□ -1.38
VCL-203ENST00000461383 TRIM6-TRIM34B2RNG4 842 aa6.4□□□□□ -1.38
VCL-203ENST00000461383 AK7Q96M32 723 aa6.4□□□□□ -1.38
VCL-203ENST00000461383 ZFRQ96KR1 1074 aaKnown RBP6.38□□□□□ -1.39
VCL-203ENST00000461383 KIAA1468Q9P260 1216 aa6.38□□□□□ -1.39
VCL-203ENST00000461383 TIMELESSQ9UNS1 1208 aa6.38□□□□□ -1.39
VCL-203ENST00000461383 NUTM2FA1L443 756 aa6.37□□□□□ -1.39
VCL-203ENST00000461383 FAM98CQ17RN3 349 aaKnown RBP6.37□□□□□ -1.39
VCL-203ENST00000461383 DDX12PQ92771 950 aa6.37□□□□□ -1.39
VCL-203ENST00000461383 BCAMP50895 628 aa6.36□□□□□ -1.39
VCL-203ENST00000461383 C14orf37Q86TY3 774 aa6.35□□□□□ -1.39
VCL-203ENST00000461383 CERKQ8TCT0 537 aa6.35□□□□□ -1.39
VCL-203ENST00000461383 DAXXQ9UER7 740 aaPredicted RBP6.35□□□□□ -1.39
VCL-203ENST00000461383 RBM33Q96EV2 1170 aaKnown RBP6.34□□□□□ -1.39
VCL-203ENST00000461383 TSKSQ9UJT2 592 aa6.34□□□□□ -1.39
VCL-203ENST00000461383 MAP3K7O43318 606 aa6.33□□□□□ -1.4
VCL-203ENST00000461383 TSR1Q2NL82 804 aaKnown RBP6.33□□□□□ -1.4
VCL-203ENST00000461383 RBM27Q9P2N5 1060 aaKnown RBP6.33□□□□□ -1.4
VCL-203ENST00000461383 SEPT9Q9UHD8 586 aaPredicted RBP6.33□□□□□ -1.4
VCL-203ENST00000461383 PRIM1P49642 420 aaKnown RBP6.32□□□□□ -1.4
VCL-203ENST00000461383 PACS2Q86VP3 889 aa6.32□□□□□ -1.4
VCL-203ENST00000461383 GPBP1L1Q9HC44 474 aaPredicted RBP6.32□□□□□ -1.4
VCL-203ENST00000461383 WBP1LQ9NX94 342 aa6.32□□□□□ -1.4
VCL-203ENST00000461383 TSR3Q9UJK0 312 aaKnown RBP6.32□□□□□ -1.4
VCL-203ENST00000461383 PRSS12P56730 875 aa6.31□□□□□ -1.4
VCL-203ENST00000461383 LRCH3Q96II8 777 aa6.31□□□□□ -1.4
VCL-203ENST00000461383 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.31□□□□□ -1.4
VCL-203ENST00000461383 TRIM66O15016 1216 aa6.3□□□□□ -1.4
VCL-203ENST00000461383 FCHSD2O94868 740 aa6.3□□□□□ -1.4
VCL-203ENST00000461383 PDE4DQ08499 809 aa6.3□□□□□ -1.4
VCL-203ENST00000461383 CDCA7LQ96GN5 454 aa6.3□□□□□ -1.4
VCL-203ENST00000461383 KDM4CQ9H3R0 1056 aa6.3□□□□□ -1.4
VCL-203ENST00000461383 FAM198AQ9UFP1 575 aa6.3□□□□□ -1.4
VCL-203ENST00000461383 MINK1Q8N4C8 1332 aaPredicted RBP6.29□□□□□ -1.4
VCL-203ENST00000461383 OSBPP22059 807 aa6.29□□□□□ -1.4
VCL-203ENST00000461383 MAP2K5Q13163 448 aa6.29□□□□□ -1.4
VCL-203ENST00000461383 IL27Q8NEV9 243 aa6.29□□□□□ -1.4
VCL-203ENST00000461383 HPS5Q9UPZ3 1129 aa6.29□□□□□ -1.4
VCL-203ENST00000461383 NBPF26B4DH59 902 aa6.28□□□□□ -1.4
VCL-203ENST00000461383 GNPATO15228 680 aa6.28□□□□□ -1.4
VCL-203ENST00000461383 KCNC4Q03721 635 aa6.28□□□□□ -1.4
VCL-203ENST00000461383 HIC1Q14526 733 aa6.28□□□□□ -1.4
VCL-203ENST00000461383 TTC13Q8NBP0 860 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms