RNA–Protein interactions for RNA: ENST00000461379.5

GAPVD1-210, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-210ENST00000461379 CNTLNQ9NXG0 1405 aa24.22■■□□□ 1.47
GAPVD1-210ENST00000461379 WASHC2CQ9Y4E1 1318 aa24.21■■□□□ 1.47
GAPVD1-210ENST00000461379 CEBPAP49715 358 aaPredicted RBP24.21■■□□□ 1.47
GAPVD1-210ENST00000461379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.21■■□□□ 1.47
GAPVD1-210ENST00000461379 EIF2AK4Q9P2K8 1649 aaKnown RBP24.21■■□□□ 1.47
GAPVD1-210ENST00000461379 RIMS1Q86UR5 1692 aaKnown RBP24.19■■□□□ 1.46
GAPVD1-210ENST00000461379 ZMYM3Q14202 1370 aa24.18■■□□□ 1.46
GAPVD1-210ENST00000461379 FER1L4A9Z1Z3 1794 aa24.17■■□□□ 1.46
GAPVD1-210ENST00000461379 RNF17Q9BXT8 1623 aaKnown RBP24.17■■□□□ 1.46
GAPVD1-210ENST00000461379 NAIPQ13075 1403 aa24.16■■□□□ 1.46
GAPVD1-210ENST00000461379 HFM1A2PYH4 1435 aa24.14■■□□□ 1.45
GAPVD1-210ENST00000461379 MROH1Q8NDA8 1641 aa24.13■■□□□ 1.45
GAPVD1-210ENST00000461379 KDM5DQ9BY66 1539 aa24.13■■□□□ 1.45
GAPVD1-210ENST00000461379 KANK1Q14678 1352 aa24.13■■□□□ 1.45
GAPVD1-210ENST00000461379 FAM135AQ9P2D6 1515 aa24.12■■□□□ 1.45
GAPVD1-210ENST00000461379 PRDM15P57071 1507 aaPredicted RBP24.1■■□□□ 1.45
GAPVD1-210ENST00000461379 ABCC3O15438 1527 aa24.1■■□□□ 1.45
GAPVD1-210ENST00000461379 CLTCQ00610 1675 aaKnown RBP24.08■■□□□ 1.45
GAPVD1-210ENST00000461379 DEPDC5O75140 1603 aa24.07■■□□□ 1.44
GAPVD1-210ENST00000461379 FBXO31Q5XUX0 539 aaPredicted RBP24.05■■□□□ 1.44
GAPVD1-210ENST00000461379 NUP155O75694 1391 aa24.04■■□□□ 1.44
GAPVD1-210ENST00000461379 MROH2AA6NES4 1674 aa24.04■■□□□ 1.44
GAPVD1-210ENST00000461379 VWDEQ8N2E2 1590 aa24.03■■□□□ 1.44
GAPVD1-210ENST00000461379 C3P01024 1663 aa24.02■■□□□ 1.44
GAPVD1-210ENST00000461379 PZPP20742 1482 aa24.02■■□□□ 1.44
GAPVD1-210ENST00000461379 NPATQ14207 1427 aa24.01■■□□□ 1.43
GAPVD1-210ENST00000461379 LMTK2Q8IWU2 1503 aa24■■□□□ 1.43
GAPVD1-210ENST00000461379 UNC13BO14795 1591 aa24■■□□□ 1.43
GAPVD1-210ENST00000461379 GCC2Q8IWJ2 1684 aa24■■□□□ 1.43
GAPVD1-210ENST00000461379 SETD5Q9C0A6 1442 aa24■■□□□ 1.43
GAPVD1-210ENST00000461379 ZC3H13Q5T200 1668 aaKnown RBP23.99■■□□□ 1.43
GAPVD1-210ENST00000461379 ARHGAP31Q2M1Z3 1444 aa23.99■■□□□ 1.43
GAPVD1-210ENST00000461379 TRIM52Q96A61 297 aa23.98■■□□□ 1.43
GAPVD1-210ENST00000461379 TNRQ92752 1358 aa23.95■■□□□ 1.42
GAPVD1-210ENST00000461379 CEP152O94986 1710 aa23.95■■□□□ 1.42
GAPVD1-210ENST00000461379 TRIM26Q12899 539 aaPredicted RBP23.94■■□□□ 1.42
GAPVD1-210ENST00000461379 CAMSAP1Q5T5Y3 1602 aa23.94■■□□□ 1.42
GAPVD1-210ENST00000461379 UHRF1BP1Q6BDS2 1440 aa23.93■■□□□ 1.42
GAPVD1-210ENST00000461379 RAB3GAP2Q9H2M9 1393 aa23.92■■□□□ 1.42
GAPVD1-210ENST00000461379 ERVK-7P63135 1459 aa23.92■■□□□ 1.42
GAPVD1-210ENST00000461379 LMTK3Q96Q04 1460 aa23.91■■□□□ 1.42
GAPVD1-210ENST00000461379 EFCAB6Q5THR3 1501 aa23.9■■□□□ 1.42
GAPVD1-210ENST00000461379 IQGAP3Q86VI3 1631 aa23.9■■□□□ 1.42
GAPVD1-210ENST00000461379 HSPA2P54652 639 aa23.88■■□□□ 1.41
GAPVD1-210ENST00000461379 ILDR1Q86SU0 546 aaPredicted RBP23.88■■□□□ 1.41
GAPVD1-210ENST00000461379 ACIN1Q9UKV3 1341 aaKnown RBP23.87■■□□□ 1.41
GAPVD1-210ENST00000461379 SPATA31D1Q6ZQQ2 1576 aa23.87■■□□□ 1.41
GAPVD1-210ENST00000461379 SLC4A1APQ9BWU0 796 aaKnown RBP23.87■■□□□ 1.41
GAPVD1-210ENST00000461379 RPRD2Q5VT52 1461 aaKnown RBP23.87■■□□□ 1.41
GAPVD1-210ENST00000461379 TET3O43151 1660 aa23.86■■□□□ 1.41
GAPVD1-210ENST00000461379 HRCP23327 699 aa23.85■■□□□ 1.41
GAPVD1-210ENST00000461379 NOS1P29475 1434 aa23.84■■□□□ 1.41
GAPVD1-210ENST00000461379 PKD2Q13563 968 aa23.84■■□□□ 1.41
GAPVD1-210ENST00000461379 PREX1Q8TCU6 1659 aa23.83■■□□□ 1.4
GAPVD1-210ENST00000461379 NLRP1Q9C000 1473 aa23.82■■□□□ 1.4
GAPVD1-210ENST00000461379 MPHOSPH9Q99550 1183 aa23.81■■□□□ 1.4
GAPVD1-210ENST00000461379 A2ML1A8K2U0 1454 aa23.81■■□□□ 1.4
GAPVD1-210ENST00000461379 SETD1BQ9UPS6 1966 aaKnown RBP23.8■■□□□ 1.4
GAPVD1-210ENST00000461379 MYO3AQ8NEV4 1616 aa23.8■■□□□ 1.4
GAPVD1-210ENST00000461379 IDI1Q13907 227 aa23.79■■□□□ 1.4
GAPVD1-210ENST00000461379 SLC52A1Q9NWF4 448 aa23.79■■□□□ 1.4
GAPVD1-210ENST00000461379 CEP170BQ9Y4F5 1589 aaPredicted RBP23.78■■□□□ 1.4
GAPVD1-210ENST00000461379 E9PCH4 1651 aa23.77■■□□□ 1.4
GAPVD1-210ENST00000461379 FOXD1Q16676 465 aa23.76■■□□□ 1.39
GAPVD1-210ENST00000461379 SYNMO15061 1565 aa23.75■■□□□ 1.39
GAPVD1-210ENST00000461379 THEMISQ8N1K5 641 aaPredicted RBP23.75■■□□□ 1.39
GAPVD1-210ENST00000461379 PTPRTO14522 1441 aa23.75■■□□□ 1.39
GAPVD1-210ENST00000461379 STAG3Q9UJ98 1225 aa23.72■■□□□ 1.39
GAPVD1-210ENST00000461379 UGGT1Q9NYU2 1555 aa23.72■■□□□ 1.39
GAPVD1-210ENST00000461379 ZNF142P52746 1687 aaPredicted RBP23.7■■□□□ 1.39
GAPVD1-210ENST00000461379 PLA2R1Q13018 1463 aa23.69■■□□□ 1.38
GAPVD1-210ENST00000461379 CFAP65Q6ZU64 1925 aaKnown RBP23.69■■□□□ 1.38
GAPVD1-210ENST00000461379 NCKAP5LQ9HCH0 1330 aa23.66■■□□□ 1.38
GAPVD1-210ENST00000461379 CHGAP10645 457 aaKnown RBP23.66■■□□□ 1.38
GAPVD1-210ENST00000461379 PIK3C2BO00750 1634 aa23.64■■□□□ 1.38
GAPVD1-210ENST00000461379 ANKLE2Q86XL3 938 aa23.64■■□□□ 1.37
GAPVD1-210ENST00000461379 PCGF6Q9BYE7 350 aa23.64■■□□□ 1.37
GAPVD1-210ENST00000461379 TRPM2O94759 1503 aa23.63■■□□□ 1.37
GAPVD1-210ENST00000461379 TMEM2Q9UHN6 1383 aa23.61■■□□□ 1.37
GAPVD1-210ENST00000461379 ADGRB3O60242 1522 aa23.6■■□□□ 1.37
GAPVD1-210ENST00000461379 DMRT2Q9Y5R5 561 aa23.6■■□□□ 1.37
GAPVD1-210ENST00000461379 SPHKAPQ2M3C7 1700 aa23.59■■□□□ 1.37
GAPVD1-210ENST00000461379 LTKP29376 864 aa23.59■■□□□ 1.37
GAPVD1-210ENST00000461379 TXNDC2Q86VQ3 553 aa23.59■■□□□ 1.37
GAPVD1-210ENST00000461379 UBR1Q8IWV7 1749 aa23.59■■□□□ 1.37
GAPVD1-210ENST00000461379 ARHGAP23Q9P227 1491 aa23.57■■□□□ 1.36
GAPVD1-210ENST00000461379 EID1Q9Y6B2 187 aa23.57■■□□□ 1.36
GAPVD1-210ENST00000461379 SLIT1O75093 1534 aa23.56■■□□□ 1.36
GAPVD1-210ENST00000461379 CCDC144AA2RUR9 1427 aa23.56■■□□□ 1.36
GAPVD1-210ENST00000461379 ANKRD30BQ9BXX2 1392 aa23.55■■□□□ 1.36
GAPVD1-210ENST00000461379 TMEM131LA2VDJ0 1609 aa23.55■■□□□ 1.36
GAPVD1-210ENST00000461379 CLTCL1P53675 1640 aa23.55■■□□□ 1.36
GAPVD1-210ENST00000461379 KDM5AP29375 1690 aaKnown RBP23.54■■□□□ 1.36
GAPVD1-210ENST00000461379 STRCQ7RTU9 1775 aa23.53■■□□□ 1.36
GAPVD1-210ENST00000461379 ZNF326Q5BKZ1 582 aaKnown RBP23.53■■□□□ 1.36
GAPVD1-210ENST00000461379 RIMS2Q9UQ26 1411 aa23.52■■□□□ 1.36
GAPVD1-210ENST00000461379 SCAF11Q99590 1463 aaKnown RBP23.52■■□□□ 1.36
GAPVD1-210ENST00000461379 HDGFP51858 240 aaKnown RBP23.52■■□□□ 1.36
GAPVD1-210ENST00000461379 ZFYVE9O95405 1425 aa23.5■■□□□ 1.35
GAPVD1-210ENST00000461379 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms