RNA–Protein interactions for RNA: ENST00000461357.1

ITM2A-203, Transcript of integral membrane protein 2A, humanhuman

TSL 5

Gene ITM2A, Length 291 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-203ENST00000461357 GPATCH8Q9UKJ3 1502 aaKnown RBP12.44□□□□□ -0.42
ITM2A-203ENST00000461357 SENP3Q9H4L4 574 aaPredicted RBP12.44□□□□□ -0.42
ITM2A-203ENST00000461357 ADGBQ8N7X0 1667 aa12.43□□□□□ -0.42
ITM2A-203ENST00000461357 NPHP4O75161 1426 aaPredicted RBP12.43□□□□□ -0.42
ITM2A-203ENST00000461357 KIAA1107Q9UPP5 1409 aa12.43□□□□□ -0.42
ITM2A-203ENST00000461357 SETD1AO15047 1707 aaKnown RBP12.42□□□□□ -0.42
ITM2A-203ENST00000461357 IQGAP1P46940 1657 aa12.42□□□□□ -0.42
ITM2A-203ENST00000461357 ANKLE2Q86XL3 938 aa12.42□□□□□ -0.42
ITM2A-203ENST00000461357 TNRQ92752 1358 aa12.42□□□□□ -0.42
ITM2A-203ENST00000461357 SYNMO15061 1565 aa12.41□□□□□ -0.42
ITM2A-203ENST00000461357 PZPP20742 1482 aa12.4□□□□□ -0.42
ITM2A-203ENST00000461357 ZNF777Q9ULD5 760 aaPredicted RBP12.4□□□□□ -0.42
ITM2A-203ENST00000461357 ZC3H13Q5T200 1668 aaKnown RBP12.4□□□□□ -0.42
ITM2A-203ENST00000461357 UGGT1Q9NYU2 1555 aa12.39□□□□□ -0.43
ITM2A-203ENST00000461357 THEMISQ8N1K5 641 aaPredicted RBP12.38□□□□□ -0.43
ITM2A-203ENST00000461357 CASKIN1Q8WXD9 1431 aa12.37□□□□□ -0.43
ITM2A-203ENST00000461357 MIA2Q96PC5 1412 aa12.37□□□□□ -0.43
ITM2A-203ENST00000461357 CCDC18Q5T9S5 1454 aa12.37□□□□□ -0.43
ITM2A-203ENST00000461357 NLRP1Q9C000 1473 aa12.37□□□□□ -0.43
ITM2A-203ENST00000461357 SRCAPQ6ZRS2 3230 aa12.36□□□□□ -0.43
ITM2A-203ENST00000461357 MBD5Q9P267 1494 aa12.35□□□□□ -0.43
ITM2A-203ENST00000461357 DHX29Q7Z478 1369 aaKnown RBP12.35□□□□□ -0.43
ITM2A-203ENST00000461357 FAM135BQ49AJ0 1406 aa12.35□□□□□ -0.43
ITM2A-203ENST00000461357 PLEKHH2Q8IVE3 1493 aa12.34□□□□□ -0.43
ITM2A-203ENST00000461357 KDM5DQ9BY66 1539 aa12.34□□□□□ -0.43
ITM2A-203ENST00000461357 FAM135AQ9P2D6 1515 aa12.34□□□□□ -0.43
ITM2A-203ENST00000461357 RTEL1-TNFRSF6BF6WH68 1400 aa12.33□□□□□ -0.44
ITM2A-203ENST00000461357 UBTFP17480 764 aaKnown RBP12.32□□□□□ -0.44
ITM2A-203ENST00000461357 UPF1Q92900 1129 aaKnown RBP eCLIP12.32□□□□□ -0.44
ITM2A-203ENST00000461357 ZNF644Q9H582 1327 aaPredicted RBP12.32□□□□□ -0.44
ITM2A-203ENST00000461357 CFDP1Q9UEE9 299 aaPredicted RBP12.31□□□□□ -0.44
ITM2A-203ENST00000461357 ROBO1Q9Y6N7 1651 aa12.3□□□□□ -0.44
ITM2A-203ENST00000461357 EHMT2Q96KQ7 1210 aa12.3□□□□□ -0.44
ITM2A-203ENST00000461357 UBR1Q8IWV7 1749 aa12.29□□□□□ -0.44
ITM2A-203ENST00000461357 KIF3BO15066 747 aa12.29□□□□□ -0.44
ITM2A-203ENST00000461357 WASHC2CQ9Y4E1 1318 aa12.29□□□□□ -0.44
ITM2A-203ENST00000461357 LTKP29376 864 aa12.28□□□□□ -0.44
ITM2A-203ENST00000461357 NCOA2Q15596 1464 aa12.27□□□□□ -0.44
ITM2A-203ENST00000461357 FYCO1Q9BQS8 1478 aa12.27□□□□□ -0.45
ITM2A-203ENST00000461357 ARHGAP23Q9P227 1491 aa12.27□□□□□ -0.45
ITM2A-203ENST00000461357 CCNB3Q8WWL7 1395 aa12.25□□□□□ -0.45
ITM2A-203ENST00000461357 SCAF11Q99590 1463 aaKnown RBP12.25□□□□□ -0.45
ITM2A-203ENST00000461357 SLIT1O75093 1534 aa12.25□□□□□ -0.45
ITM2A-203ENST00000461357 MAP3K1Q13233 1512 aa12.25□□□□□ -0.45
ITM2A-203ENST00000461357 TIAM1Q13009 1591 aa12.25□□□□□ -0.45
ITM2A-203ENST00000461357 ABCC3O15438 1527 aa12.23□□□□□ -0.45
ITM2A-203ENST00000461357 ERVK-7P63135 1459 aa12.23□□□□□ -0.45
ITM2A-203ENST00000461357 TMEM94Q12767 1356 aa12.22□□□□□ -0.45
ITM2A-203ENST00000461357 LRP6O75581 1613 aa12.22□□□□□ -0.45
ITM2A-203ENST00000461357 CFAP65Q6ZU64 1925 aaKnown RBP12.21□□□□□ -0.45
ITM2A-203ENST00000461357 PHLPP1O60346 1717 aa12.21□□□□□ -0.45
ITM2A-203ENST00000461357 MROH1Q8NDA8 1641 aa12.21□□□□□ -0.46
ITM2A-203ENST00000461357 COL16A1Q07092 1604 aaPredicted RBP12.2□□□□□ -0.46
ITM2A-203ENST00000461357 TXNDC2Q86VQ3 553 aa12.2□□□□□ -0.46
ITM2A-203ENST00000461357 RBM33Q96EV2 1170 aaKnown RBP12.19□□□□□ -0.46
ITM2A-203ENST00000461357 TET3O43151 1660 aa12.19□□□□□ -0.46
ITM2A-203ENST00000461357 JCADQ9P266 1359 aa12.18□□□□□ -0.46
ITM2A-203ENST00000461357 CCDC141Q6ZP82 1450 aa12.18□□□□□ -0.46
ITM2A-203ENST00000461357 CAMSAP2Q08AD1 1489 aa12.17□□□□□ -0.46
ITM2A-203ENST00000461357 TRIM52Q96A61 297 aa12.17□□□□□ -0.46
ITM2A-203ENST00000461357 CEP152O94986 1710 aa12.17□□□□□ -0.46
ITM2A-203ENST00000461357 PRDM15P57071 1507 aaPredicted RBP12.16□□□□□ -0.46
ITM2A-203ENST00000461357 LRRC9Q6ZRR7 1453 aa12.16□□□□□ -0.46
ITM2A-203ENST00000461357 KCNA6P17658 529 aa12.16□□□□□ -0.46
ITM2A-203ENST00000461357 NWD1Q149M9 1564 aa12.15□□□□□ -0.46
ITM2A-203ENST00000461357 SLAIN2Q9P270 581 aa12.15□□□□□ -0.46
ITM2A-203ENST00000461357 PIK3C2BO00750 1634 aa12.15□□□□□ -0.47
ITM2A-203ENST00000461357 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
ITM2A-203ENST00000461357 MTUS2Q5JR59 1369 aa12.14□□□□□ -0.47
ITM2A-203ENST00000461357 TMEM2Q9UHN6 1383 aa12.14□□□□□ -0.47
ITM2A-203ENST00000461357 ARHGEF5Q12774 1597 aa12.13□□□□□ -0.47
ITM2A-203ENST00000461357 CEP162Q5TB80 1403 aa12.13□□□□□ -0.47
ITM2A-203ENST00000461357 EIF2AK4Q9P2K8 1649 aaKnown RBP12.13□□□□□ -0.47
ITM2A-203ENST00000461357 RSPH4AQ5TD94 716 aa12.13□□□□□ -0.47
ITM2A-203ENST00000461357 ZNF772Q68DY9 489 aaPredicted RBP12.13□□□□□ -0.47
ITM2A-203ENST00000461357 PROSER2Q86WR7 435 aaPredicted RBP12.13□□□□□ -0.47
ITM2A-203ENST00000461357 SHPRHQ149N8 1683 aa12.13□□□□□ -0.47
ITM2A-203ENST00000461357 SPATA31A6Q5VVP1 1343 aa12.12□□□□□ -0.47
ITM2A-203ENST00000461357 KDM5AP29375 1690 aaKnown RBP12.12□□□□□ -0.47
ITM2A-203ENST00000461357 FGD6Q6ZV73 1430 aa12.11□□□□□ -0.47
ITM2A-203ENST00000461357 NKTRP30414 1462 aaKnown RBP12.11□□□□□ -0.47
ITM2A-203ENST00000461357 EHBP1L1Q8N3D4 1523 aa12.11□□□□□ -0.47
ITM2A-203ENST00000461357 ARHGAP31Q2M1Z3 1444 aa12.11□□□□□ -0.47
ITM2A-203ENST00000461357 RXRBP28702 533 aa12.1□□□□□ -0.47
ITM2A-203ENST00000461357 SLC26A8Q96RN1 970 aa12.1□□□□□ -0.47
ITM2A-203ENST00000461357 EID1Q9Y6B2 187 aa12.1□□□□□ -0.47
ITM2A-203ENST00000461357 DIP2AQ14689 1571 aa12.09□□□□□ -0.47
ITM2A-203ENST00000461357 MAST1Q9Y2H9 1570 aa12.09□□□□□ -0.47
ITM2A-203ENST00000461357 CHD2O14647 1828 aaKnown RBP12.09□□□□□ -0.47
ITM2A-203ENST00000461357 AHDC1Q5TGY3 1603 aaPredicted RBP12.09□□□□□ -0.47
ITM2A-203ENST00000461357 CHIC1Q5VXU3 224 aa12.08□□□□□ -0.48
ITM2A-203ENST00000461357 MSH6P52701 1360 aa12.07□□□□□ -0.48
ITM2A-203ENST00000461357 RGS12O14924 1447 aa12.06□□□□□ -0.48
ITM2A-203ENST00000461357 EFCAB6Q5THR3 1501 aa12.06□□□□□ -0.48
ITM2A-203ENST00000461357 TSPY4P0CV99 314 aa12.05□□□□□ -0.48
ITM2A-203ENST00000461357 TSPY10P0CW01 314 aa12.05□□□□□ -0.48
ITM2A-203ENST00000461357 IDI1Q13907 227 aa12.05□□□□□ -0.48
ITM2A-203ENST00000461357 SETBP1Q9Y6X0 1596 aa12.05□□□□□ -0.48
ITM2A-203ENST00000461357 MEX3CQ5U5Q3 659 aaKnown RBP12.04□□□□□ -0.48
ITM2A-203ENST00000461357 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms