RNA–Protein interactions for RNA: ENST00000461336.5

KCNIP3-204, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 2

Gene KCNIP3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-204ENST00000461336 A2ML1A8K2U0 1454 aa19.14■□□□□ 0.65
KCNIP3-204ENST00000461336 VWDEQ8N2E2 1590 aa19.12■□□□□ 0.65
KCNIP3-204ENST00000461336 EHBP1L1Q8N3D4 1523 aa19.1■□□□□ 0.65
KCNIP3-204ENST00000461336 MBD5Q9P267 1494 aa19.09■□□□□ 0.65
KCNIP3-204ENST00000461336 TIAM1Q13009 1591 aa19.09■□□□□ 0.65
KCNIP3-204ENST00000461336 CEP162Q5TB80 1403 aa19.08■□□□□ 0.65
KCNIP3-204ENST00000461336 RGS17Q9UGC6 210 aaPredicted RBP19.08■□□□□ 0.64
KCNIP3-204ENST00000461336 RTEL1-TNFRSF6BF6WH68 1400 aa19.08■□□□□ 0.64
KCNIP3-204ENST00000461336 ADGBQ8N7X0 1667 aa19.07■□□□□ 0.64
KCNIP3-204ENST00000461336 ZNF644Q9H582 1327 aaPredicted RBP19.06■□□□□ 0.64
KCNIP3-204ENST00000461336 GGT6Q6P531 493 aa19.05■□□□□ 0.64
KCNIP3-204ENST00000461336 DHX29Q7Z478 1369 aaKnown RBP19.03■□□□□ 0.64
KCNIP3-204ENST00000461336 STRCP1A6NGW2 1772 aa19.01■□□□□ 0.63
KCNIP3-204ENST00000461336 MED14O60244 1454 aa19■□□□□ 0.63
KCNIP3-204ENST00000461336 RNF17Q9BXT8 1623 aaKnown RBP19■□□□□ 0.63
KCNIP3-204ENST00000461336 RSPH4AQ5TD94 716 aa18.99■□□□□ 0.63
KCNIP3-204ENST00000461336 FAM135AQ9P2D6 1515 aa18.99■□□□□ 0.63
KCNIP3-204ENST00000461336 CCDC141Q6ZP82 1450 aa18.98■□□□□ 0.63
KCNIP3-204ENST00000461336 SENP3Q9H4L4 574 aaPredicted RBP18.98■□□□□ 0.63
KCNIP3-204ENST00000461336 DEPDC5O75140 1603 aa18.98■□□□□ 0.63
KCNIP3-204ENST00000461336 LRRC7Q96NW7 1537 aa18.98■□□□□ 0.63
KCNIP3-204ENST00000461336 NCOA2Q15596 1464 aa18.97■□□□□ 0.63
KCNIP3-204ENST00000461336 TNRQ92752 1358 aa18.97■□□□□ 0.63
KCNIP3-204ENST00000461336 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.96■□□□□ 0.63
KCNIP3-204ENST00000461336 NPHP4O75161 1426 aaPredicted RBP18.96■□□□□ 0.63
KCNIP3-204ENST00000461336 SYNMO15061 1565 aa18.95■□□□□ 0.62
KCNIP3-204ENST00000461336 FBXO31Q5XUX0 539 aaPredicted RBP18.95■□□□□ 0.62
KCNIP3-204ENST00000461336 PZPP20742 1482 aa18.95■□□□□ 0.62
KCNIP3-204ENST00000461336 CAMSAP2Q08AD1 1489 aa18.95■□□□□ 0.62
KCNIP3-204ENST00000461336 ANKLE2Q86XL3 938 aa18.94■□□□□ 0.62
KCNIP3-204ENST00000461336 IQGAP1P46940 1657 aa18.94■□□□□ 0.62
KCNIP3-204ENST00000461336 KIF3BO15066 747 aa18.93■□□□□ 0.62
KCNIP3-204ENST00000461336 KDM5DQ9BY66 1539 aa18.93■□□□□ 0.62
KCNIP3-204ENST00000461336 ARHGEF5Q12774 1597 aa18.91■□□□□ 0.62
KCNIP3-204ENST00000461336 POTEAQ6S8J7 498 aa18.91■□□□□ 0.62
KCNIP3-204ENST00000461336 UGGT1Q9NYU2 1555 aa18.9■□□□□ 0.62
KCNIP3-204ENST00000461336 NLRP1Q9C000 1473 aa18.9■□□□□ 0.62
KCNIP3-204ENST00000461336 WASHC2CQ9Y4E1 1318 aa18.88■□□□□ 0.61
KCNIP3-204ENST00000461336 SETD1AO15047 1707 aaKnown RBP18.87■□□□□ 0.61
KCNIP3-204ENST00000461336 TSPY4P0CV99 314 aa18.87■□□□□ 0.61
KCNIP3-204ENST00000461336 TSPY10P0CW01 314 aa18.87■□□□□ 0.61
KCNIP3-204ENST00000461336 THEMISQ8N1K5 641 aaPredicted RBP18.87■□□□□ 0.61
KCNIP3-204ENST00000461336 MIA2Q96PC5 1412 aa18.87■□□□□ 0.61
KCNIP3-204ENST00000461336 ZC3H13Q5T200 1668 aaKnown RBP18.86■□□□□ 0.61
KCNIP3-204ENST00000461336 LRRC9Q6ZRR7 1453 aa18.85■□□□□ 0.61
KCNIP3-204ENST00000461336 VPS8Q8N3P4 1428 aa18.85■□□□□ 0.61
KCNIP3-204ENST00000461336 LOC105371045A0A1W2PR82 267 aa18.85■□□□□ 0.61
KCNIP3-204ENST00000461336 XIRP1Q702N8 1843 aaKnown RBP18.84■□□□□ 0.61
KCNIP3-204ENST00000461336 MAST1Q9Y2H9 1570 aa18.83■□□□□ 0.6
KCNIP3-204ENST00000461336 MAP3K1Q13233 1512 aa18.81■□□□□ 0.6
KCNIP3-204ENST00000461336 FAM135BQ49AJ0 1406 aa18.78■□□□□ 0.6
KCNIP3-204ENST00000461336 ABCC3O15438 1527 aa18.78■□□□□ 0.6
KCNIP3-204ENST00000461336 EIF2AK4Q9P2K8 1649 aaKnown RBP18.78■□□□□ 0.6
KCNIP3-204ENST00000461336 MYOM3Q5VTT5 1437 aa18.76■□□□□ 0.59
KCNIP3-204ENST00000461336 KANK4Q5T7N3 995 aaPredicted RBP18.74■□□□□ 0.59
KCNIP3-204ENST00000461336 UBR1Q8IWV7 1749 aa18.73■□□□□ 0.59
KCNIP3-204ENST00000461336 MROH1Q8NDA8 1641 aa18.73■□□□□ 0.59
KCNIP3-204ENST00000461336 ERVK-7P63135 1459 aa18.72■□□□□ 0.59
KCNIP3-204ENST00000461336 SCAF11Q99590 1463 aaKnown RBP18.72■□□□□ 0.59
KCNIP3-204ENST00000461336 SRCAPQ6ZRS2 3230 aa18.72■□□□□ 0.59
KCNIP3-204ENST00000461336 ROBO1Q9Y6N7 1651 aa18.72■□□□□ 0.59
KCNIP3-204ENST00000461336 DUOX2Q9NRD8 1548 aa18.71■□□□□ 0.59
KCNIP3-204ENST00000461336 ARHGAP23Q9P227 1491 aa18.7■□□□□ 0.58
KCNIP3-204ENST00000461336 SLIT1O75093 1534 aa18.68■□□□□ 0.58
KCNIP3-204ENST00000461336 ARHGAP31Q2M1Z3 1444 aa18.67■□□□□ 0.58
KCNIP3-204ENST00000461336 LTKP29376 864 aa18.67■□□□□ 0.58
KCNIP3-204ENST00000461336 PRDM15P57071 1507 aaPredicted RBP18.66■□□□□ 0.58
KCNIP3-204ENST00000461336 UPF1Q92900 1129 aaKnown RBP eCLIP18.66■□□□□ 0.58
KCNIP3-204ENST00000461336 ERBINQ96RT1 1412 aa18.66■□□□□ 0.58
KCNIP3-204ENST00000461336 KIF15Q9NS87 1388 aa18.65■□□□□ 0.58
KCNIP3-204ENST00000461336 CEP152O94986 1710 aa18.64■□□□□ 0.57
KCNIP3-204ENST00000461336 TMEM94Q12767 1356 aa18.64■□□□□ 0.57
KCNIP3-204ENST00000461336 ABCC5O15440 1437 aa18.64■□□□□ 0.57
KCNIP3-204ENST00000461336 CROCC2H7BZ55 1655 aa18.61■□□□□ 0.57
KCNIP3-204ENST00000461336 TXNDC2Q86VQ3 553 aa18.6■□□□□ 0.57
KCNIP3-204ENST00000461336 PTPN23Q9H3S7 1636 aa18.6■□□□□ 0.57
KCNIP3-204ENST00000461336 DAPK1P53355 1430 aa18.59■□□□□ 0.57
KCNIP3-204ENST00000461336 RRP7BPQ9NSQ0 103 aa18.59■□□□□ 0.57
KCNIP3-204ENST00000461336 LRP6O75581 1613 aa18.59■□□□□ 0.57
KCNIP3-204ENST00000461336 PHLPP1O60346 1717 aa18.58■□□□□ 0.57
KCNIP3-204ENST00000461336 FGD6Q6ZV73 1430 aa18.57■□□□□ 0.56
KCNIP3-204ENST00000461336 JCADQ9P266 1359 aa18.57■□□□□ 0.56
KCNIP3-204ENST00000461336 APLP2Q06481 763 aa18.57■□□□□ 0.56
KCNIP3-204ENST00000461336 COL16A1Q07092 1604 aaPredicted RBP18.56■□□□□ 0.56
KCNIP3-204ENST00000461336 KANK1Q14678 1352 aa18.56■□□□□ 0.56
KCNIP3-204ENST00000461336 LMTK2Q8IWU2 1503 aa18.56■□□□□ 0.56
KCNIP3-204ENST00000461336 CFAP65Q6ZU64 1925 aaKnown RBP18.55■□□□□ 0.56
KCNIP3-204ENST00000461336 EID1Q9Y6B2 187 aa18.55■□□□□ 0.56
KCNIP3-204ENST00000461336 RBM33Q96EV2 1170 aaKnown RBP18.54■□□□□ 0.56
KCNIP3-204ENST00000461336 NWD1Q149M9 1564 aa18.54■□□□□ 0.56
KCNIP3-204ENST00000461336 ANKRD30AQ9BXX3 1397 aa18.54■□□□□ 0.56
KCNIP3-204ENST00000461336 TMEM2Q9UHN6 1383 aa18.54■□□□□ 0.56
KCNIP3-204ENST00000461336 PIK3C2BO00750 1634 aa18.53■□□□□ 0.56
KCNIP3-204ENST00000461336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.53■□□□□ 0.56
KCNIP3-204ENST00000461336 TET3O43151 1660 aa18.53■□□□□ 0.56
KCNIP3-204ENST00000461336 KDM5AP29375 1690 aaKnown RBP18.53■□□□□ 0.56
KCNIP3-204ENST00000461336 KCNA6P17658 529 aa18.52■□□□□ 0.56
KCNIP3-204ENST00000461336 TRIM52Q96A61 297 aa18.52■□□□□ 0.56
KCNIP3-204ENST00000461336 NKTRP30414 1462 aaKnown RBP18.52■□□□□ 0.55
KCNIP3-204ENST00000461336 EFCAB6Q5THR3 1501 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms