RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 NCOA1Q15788 1441 aa15.24■□□□□ 0.03
CD40-203ENST00000461171 FBXO41Q8TF61 875 aa15.23■□□□□ 0.03
CD40-203ENST00000461171 RNF17Q9BXT8 1623 aaKnown RBP15.22■□□□□ 0.03
CD40-203ENST00000461171 PTPRTO14522 1441 aa15.22■□□□□ 0.03
CD40-203ENST00000461171 CEP170BQ9Y4F5 1589 aaPredicted RBP15.22■□□□□ 0.03
CD40-203ENST00000461171 SHANK2Q9UPX8 1470 aa15.21■□□□□ 0.03
CD40-203ENST00000461171 KIF3BO15066 747 aa15.21■□□□□ 0.03
CD40-203ENST00000461171 TSPY4P0CV99 314 aa15.21■□□□□ 0.03
CD40-203ENST00000461171 TSPY10P0CW01 314 aa15.21■□□□□ 0.03
CD40-203ENST00000461171 EIF2AK4Q9P2K8 1649 aaKnown RBP15.21■□□□□ 0.02
CD40-203ENST00000461171 PZPP20742 1482 aa15.2■□□□□ 0.02
CD40-203ENST00000461171 CROCC2H7BZ55 1655 aa15.2■□□□□ 0.02
CD40-203ENST00000461171 CAMSAP1Q5T5Y3 1602 aa15.2■□□□□ 0.02
CD40-203ENST00000461171 PTPN23Q9H3S7 1636 aa15.2■□□□□ 0.02
CD40-203ENST00000461171 TCOF1Q13428 1488 aaKnown RBP15.2■□□□□ 0.02
CD40-203ENST00000461171 FGD6Q6ZV73 1430 aa15.19■□□□□ 0.02
CD40-203ENST00000461171 MROH1Q8NDA8 1641 aa15.19■□□□□ 0.02
CD40-203ENST00000461171 DMRT2Q9Y5R5 561 aa15.19■□□□□ 0.02
CD40-203ENST00000461171 PLA2R1Q13018 1463 aa15.19■□□□□ 0.02
CD40-203ENST00000461171 ABCC5O15440 1437 aa15.18■□□□□ 0.02
CD40-203ENST00000461171 A2ML1A8K2U0 1454 aa15.17■□□□□ 0.02
CD40-203ENST00000461171 APLP2Q06481 763 aa15.17■□□□□ 0.02
CD40-203ENST00000461171 DNMT1P26358 1616 aaKnown RBP15.17■□□□□ 0.02
CD40-203ENST00000461171 ABCC3O15438 1527 aa15.17■□□□□ 0.02
CD40-203ENST00000461171 DUOX2Q9NRD8 1548 aa15.17■□□□□ 0.02
CD40-203ENST00000461171 ZC3H13Q5T200 1668 aaKnown RBP15.16■□□□□ 0.02
CD40-203ENST00000461171 CERKQ8TCT0 537 aa15.16■□□□□ 0.02
CD40-203ENST00000461171 DAPK1P53355 1430 aa15.15■□□□□ 0.02
CD40-203ENST00000461171 WASHC2CQ9Y4E1 1318 aa15.14■□□□□ 0.01
CD40-203ENST00000461171 LTBP4Q8N2S1 1624 aa15.14■□□□□ 0.01
CD40-203ENST00000461171 TNRQ92752 1358 aa15.13■□□□□ 0.01
CD40-203ENST00000461171 KIF15Q9NS87 1388 aa15.13■□□□□ 0.01
CD40-203ENST00000461171 PRDM15P57071 1507 aaPredicted RBP15.13■□□□□ 0.01
CD40-203ENST00000461171 FBXO31Q5XUX0 539 aaPredicted RBP15.13■□□□□ 0.01
CD40-203ENST00000461171 ERBINQ96RT1 1412 aa15.12■□□□□ 0.01
CD40-203ENST00000461171 SPATA31D1Q6ZQQ2 1576 aa15.11■□□□□ 0.01
CD40-203ENST00000461171 NLRP1Q9C000 1473 aa15.1■□□□□ 0.01
CD40-203ENST00000461171 DEPDC5O75140 1603 aa15.1■□□□□ 0.01
CD40-203ENST00000461171 PKD2Q13563 968 aa15.09■□□□□ 0.01
CD40-203ENST00000461171 CEP152O94986 1710 aa15.09■□□□□ 0.01
CD40-203ENST00000461171 ERVK-7P63135 1459 aa15.08■□□□□ 0.01
CD40-203ENST00000461171 NCKAP5LQ9HCH0 1330 aa15.08■□□□□ 0
CD40-203ENST00000461171 ADGRL2O95490 1459 aa15.08■□□□□ 0
CD40-203ENST00000461171 NEURL4Q96JN8 1562 aa15.07■□□□□ 0
CD40-203ENST00000461171 POLR1AO95602 1720 aaPredicted RBP15.06■□□□□ 0
CD40-203ENST00000461171 ARHGAP31Q2M1Z3 1444 aa15.06■□□□□ 0
CD40-203ENST00000461171 IQSEC2Q5JU85 1478 aa15.06■□□□□ 0
CD40-203ENST00000461171 RRP7BPQ9NSQ0 103 aa15.05■□□□□ -0
CD40-203ENST00000461171 ANKRD30AQ9BXX3 1397 aa15.05■□□□□ -0
CD40-203ENST00000461171 VWDEQ8N2E2 1590 aa15.05■□□□□ -0
CD40-203ENST00000461171 UGGT1Q9NYU2 1555 aa15.05■□□□□ -0
CD40-203ENST00000461171 LMTK2Q8IWU2 1503 aa15.02■□□□□ -0
CD40-203ENST00000461171 ZNF335Q9H4Z2 1342 aaPredicted RBP15.02■□□□□ -0
CD40-203ENST00000461171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.01□□□□□ -0.01
CD40-203ENST00000461171 MED14O60244 1454 aa15.01□□□□□ -0.01
CD40-203ENST00000461171 THEMISQ8N1K5 641 aaPredicted RBP14.99□□□□□ -0.01
CD40-203ENST00000461171 CHIC2Q9UKJ5 165 aa14.99□□□□□ -0.01
CD40-203ENST00000461171 UBR1Q8IWV7 1749 aa14.99□□□□□ -0.01
CD40-203ENST00000461171 EFCAB6Q5THR3 1501 aa14.97□□□□□ -0.01
CD40-203ENST00000461171 FAM50AQ14320 339 aaKnown RBP14.97□□□□□ -0.01
CD40-203ENST00000461171 KANK1Q14678 1352 aa14.97□□□□□ -0.01
CD40-203ENST00000461171 NPHP4O75161 1426 aaPredicted RBP14.96□□□□□ -0.01
CD40-203ENST00000461171 ANKLE2Q86XL3 938 aa14.96□□□□□ -0.01
CD40-203ENST00000461171 ANKRD50Q9ULJ7 1429 aa14.96□□□□□ -0.01
CD40-203ENST00000461171 CFAP65Q6ZU64 1925 aaKnown RBP14.96□□□□□ -0.02
CD40-203ENST00000461171 ARHGAP23Q9P227 1491 aa14.95□□□□□ -0.02
CD40-203ENST00000461171 IQGAP1P46940 1657 aa14.95□□□□□ -0.02
CD40-203ENST00000461171 SLIT1O75093 1534 aa14.95□□□□□ -0.02
CD40-203ENST00000461171 CPS1P31327 1500 aa14.94□□□□□ -0.02
CD40-203ENST00000461171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
CD40-203ENST00000461171 PIK3C2BO00750 1634 aa14.94□□□□□ -0.02
CD40-203ENST00000461171 UNC13BO14795 1591 aa14.94□□□□□ -0.02
CD40-203ENST00000461171 SYNMO15061 1565 aa14.94□□□□□ -0.02
CD40-203ENST00000461171 NOS1P29475 1434 aa14.93□□□□□ -0.02
CD40-203ENST00000461171 ROCK1Q13464 1354 aa14.93□□□□□ -0.02
CD40-203ENST00000461171 KDM5AP29375 1690 aaKnown RBP14.93□□□□□ -0.02
CD40-203ENST00000461171 SCAF11Q99590 1463 aaKnown RBP14.92□□□□□ -0.02
CD40-203ENST00000461171 RPRD2Q5VT52 1461 aaKnown RBP14.91□□□□□ -0.02
CD40-203ENST00000461171 TET3O43151 1660 aa14.9□□□□□ -0.02
CD40-203ENST00000461171 TMEM2Q9UHN6 1383 aa14.88□□□□□ -0.03
CD40-203ENST00000461171 STRCP1A6NGW2 1772 aa14.88□□□□□ -0.03
CD40-203ENST00000461171 ADGRB3O60242 1522 aa14.87□□□□□ -0.03
CD40-203ENST00000461171 LTKP29376 864 aa14.87□□□□□ -0.03
CD40-203ENST00000461171 GCC2Q8IWJ2 1684 aa14.87□□□□□ -0.03
CD40-203ENST00000461171 IDI1Q13907 227 aa14.86□□□□□ -0.03
CD40-203ENST00000461171 IQGAP3Q86VI3 1631 aa14.85□□□□□ -0.03
CD40-203ENST00000461171 RRBP1Q9P2E9 1410 aaKnown RBP14.85□□□□□ -0.03
CD40-203ENST00000461171 UBAP1LF5GYI3 381 aa14.84□□□□□ -0.03
CD40-203ENST00000461171 ALKQ9UM73 1620 aa14.84□□□□□ -0.03
CD40-203ENST00000461171 LRRC7Q96NW7 1537 aa14.83□□□□□ -0.04
CD40-203ENST00000461171 TXNDC2Q86VQ3 553 aa14.83□□□□□ -0.04
CD40-203ENST00000461171 PPARGC1BQ86YN6 1023 aaKnown RBP14.83□□□□□ -0.04
CD40-203ENST00000461171 SLC52A1Q9NWF4 448 aa14.83□□□□□ -0.04
CD40-203ENST00000461171 E9PCH4 1651 aa14.83□□□□□ -0.04
CD40-203ENST00000461171 EID1Q9Y6B2 187 aa14.8□□□□□ -0.04
CD40-203ENST00000461171 ZFYVE9O95405 1425 aa14.8□□□□□ -0.04
CD40-203ENST00000461171 TMEM131LA2VDJ0 1609 aa14.79□□□□□ -0.04
CD40-203ENST00000461171 STAG3Q9UJ98 1225 aa14.79□□□□□ -0.04
CD40-203ENST00000461171 ITGAEP38570 1179 aa14.78□□□□□ -0.04
CD40-203ENST00000461171 NUP155O75694 1391 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms