RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 ADGBQ8N7X0 1667 aa11.83□□□□□ -0.51
HDAC9-219ENST00000461159 RTN4Q9NQC3 1192 aaKnown RBP11.82□□□□□ -0.52
HDAC9-219ENST00000461159 FGD1P98174 961 aa11.81□□□□□ -0.52
HDAC9-219ENST00000461159 NUP155O75694 1391 aa11.81□□□□□ -0.52
HDAC9-219ENST00000461159 SHANK2Q9UPX8 1470 aa11.81□□□□□ -0.52
HDAC9-219ENST00000461159 TRHP20396 242 aaPredicted RBP11.81□□□□□ -0.52
HDAC9-219ENST00000461159 PLEKHH2Q8IVE3 1493 aa11.81□□□□□ -0.52
HDAC9-219ENST00000461159 PKD2Q13563 968 aa11.79□□□□□ -0.52
HDAC9-219ENST00000461159 PZPP20742 1482 aa11.78□□□□□ -0.52
HDAC9-219ENST00000461159 DIP2BQ9P265 1576 aa11.78□□□□□ -0.52
HDAC9-219ENST00000461159 DNAJC5Q9H3Z4 198 aa11.78□□□□□ -0.52
HDAC9-219ENST00000461159 ARAP3Q8WWN8 1544 aa11.77□□□□□ -0.52
HDAC9-219ENST00000461159 KIF3BO15066 747 aa11.77□□□□□ -0.53
HDAC9-219ENST00000461159 HOMEZQ8IX15 550 aa11.75□□□□□ -0.53
HDAC9-219ENST00000461159 TAF7LQ5H9L4 462 aa11.74□□□□□ -0.53
HDAC9-219ENST00000461159 MAP3K4Q9Y6R4 1608 aa11.74□□□□□ -0.53
HDAC9-219ENST00000461159 MAST1Q9Y2H9 1570 aa11.74□□□□□ -0.53
HDAC9-219ENST00000461159 ZFYVE16Q7Z3T8 1539 aa11.74□□□□□ -0.53
HDAC9-219ENST00000461159 DEKP35659 375 aaKnown RBP11.74□□□□□ -0.53
HDAC9-219ENST00000461159 GLIPR1L2Q4G1C9 344 aa11.74□□□□□ -0.53
HDAC9-219ENST00000461159 GGT6Q6P531 493 aa11.74□□□□□ -0.53
HDAC9-219ENST00000461159 ATP7AQ04656 1500 aa11.73□□□□□ -0.53
HDAC9-219ENST00000461159 ZNF518AQ6AHZ1 1483 aa11.73□□□□□ -0.53
HDAC9-219ENST00000461159 POGZQ7Z3K3 1410 aa11.73□□□□□ -0.53
HDAC9-219ENST00000461159 ANKRD30BQ9BXX2 1392 aa11.73□□□□□ -0.53
HDAC9-219ENST00000461159 PPP1R15AO75807 674 aaPredicted RBP11.72□□□□□ -0.53
HDAC9-219ENST00000461159 KIF13AQ9H1H9 1805 aa11.71□□□□□ -0.53
HDAC9-219ENST00000461159 TONSLQ96HA7 1378 aa11.71□□□□□ -0.54
HDAC9-219ENST00000461159 NEO1Q92859 1461 aa11.71□□□□□ -0.54
HDAC9-219ENST00000461159 YEATS2Q9ULM3 1422 aa11.7□□□□□ -0.54
HDAC9-219ENST00000461159 PLXNC1O60486 1568 aa11.7□□□□□ -0.54
HDAC9-219ENST00000461159 COL17A1Q9UMD9 1497 aaPredicted RBP11.7□□□□□ -0.54
HDAC9-219ENST00000461159 KIDINS220Q9ULH0 1771 aa11.7□□□□□ -0.54
HDAC9-219ENST00000461159 GLI2P10070 1586 aa11.7□□□□□ -0.54
HDAC9-219ENST00000461159 HIRIP3Q9BW71 556 aaPredicted RBP11.7□□□□□ -0.54
HDAC9-219ENST00000461159 DUOX2Q9NRD8 1548 aa11.7□□□□□ -0.54
HDAC9-219ENST00000461159 RTEL1-TNFRSF6BF6WH68 1400 aa11.7□□□□□ -0.54
HDAC9-219ENST00000461159 L3MBTL2Q969R5 705 aa11.69□□□□□ -0.54
HDAC9-219ENST00000461159 BCL11BQ9C0K0 894 aaPredicted RBP11.69□□□□□ -0.54
HDAC9-219ENST00000461159 INO80Q9ULG1 1556 aaPredicted RBP11.68□□□□□ -0.54
HDAC9-219ENST00000461159 PPRC1Q5VV67 1664 aaKnown RBP11.68□□□□□ -0.54
HDAC9-219ENST00000461159 DHX29Q7Z478 1369 aaKnown RBP11.68□□□□□ -0.54
HDAC9-219ENST00000461159 AAMPQ13685 434 aa11.68□□□□□ -0.54
HDAC9-219ENST00000461159 FAM135AQ9P2D6 1515 aa11.67□□□□□ -0.54
HDAC9-219ENST00000461159 MLECQ14165 292 aa11.67□□□□□ -0.54
HDAC9-219ENST00000461159 ZNF326Q5BKZ1 582 aaKnown RBP11.67□□□□□ -0.54
HDAC9-219ENST00000461159 RGL3Q3MIN7 710 aa11.67□□□□□ -0.54
HDAC9-219ENST00000461159 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.67□□□□□ -0.54
HDAC9-219ENST00000461159 ERBINQ96RT1 1412 aa11.66□□□□□ -0.54
HDAC9-219ENST00000461159 CFAP74Q9C0B2 1584 aa11.66□□□□□ -0.54
HDAC9-219ENST00000461159 A2MP01023 1474 aa11.65□□□□□ -0.54
HDAC9-219ENST00000461159 KDM5DQ9BY66 1539 aa11.65□□□□□ -0.54
HDAC9-219ENST00000461159 KDM5CP41229 1560 aa11.65□□□□□ -0.54
HDAC9-219ENST00000461159 RPRD2Q5VT52 1461 aaKnown RBP11.65□□□□□ -0.55
HDAC9-219ENST00000461159 MLH3Q9UHC1 1453 aa11.65□□□□□ -0.55
HDAC9-219ENST00000461159 KDM2AQ9Y2K7 1162 aa11.65□□□□□ -0.55
HDAC9-219ENST00000461159 HECW2Q9P2P5 1572 aa11.64□□□□□ -0.55
HDAC9-219ENST00000461159 RICTORQ6R327 1708 aa11.64□□□□□ -0.55
HDAC9-219ENST00000461159 ZMYND15Q9H091 742 aa11.64□□□□□ -0.55
HDAC9-219ENST00000461159 UNC13BO14795 1591 aa11.64□□□□□ -0.55
HDAC9-219ENST00000461159 CFAP65Q6ZU64 1925 aaKnown RBP11.64□□□□□ -0.55
HDAC9-219ENST00000461159 TEX14Q8IWB6 1497 aa11.64□□□□□ -0.55
HDAC9-219ENST00000461159 ABCA6Q8N139 1617 aa11.64□□□□□ -0.55
HDAC9-219ENST00000461159 NBPF8Q3BBV2 869 aa11.63□□□□□ -0.55
HDAC9-219ENST00000461159 FRMPD1Q5SYB0 1578 aa11.63□□□□□ -0.55
HDAC9-219ENST00000461159 PLA2R1Q13018 1463 aa11.62□□□□□ -0.55
HDAC9-219ENST00000461159 WASHC2CQ9Y4E1 1318 aa11.62□□□□□ -0.55
HDAC9-219ENST00000461159 FKBP8Q14318 412 aa11.62□□□□□ -0.55
HDAC9-219ENST00000461159 TULP1O00294 542 aaPredicted RBP11.61□□□□□ -0.55
HDAC9-219ENST00000461159 MAGI2Q86UL8 1455 aa11.61□□□□□ -0.55
HDAC9-219ENST00000461159 IQGAP3Q86VI3 1631 aa11.6□□□□□ -0.55
HDAC9-219ENST00000461159 DIP2CQ9Y2E4 1556 aa11.6□□□□□ -0.55
HDAC9-219ENST00000461159 KANK1Q14678 1352 aa11.6□□□□□ -0.55
HDAC9-219ENST00000461159 BCANQ96GW7 911 aa11.6□□□□□ -0.55
HDAC9-219ENST00000461159 ARID4BQ4LE39 1312 aaPredicted RBP11.59□□□□□ -0.55
HDAC9-219ENST00000461159 DCAF11Q8TEB1 546 aa11.59□□□□□ -0.55
HDAC9-219ENST00000461159 SENP3Q9H4L4 574 aaPredicted RBP11.59□□□□□ -0.55
HDAC9-219ENST00000461159 DDX10Q13206 875 aaKnown RBP11.58□□□□□ -0.56
HDAC9-219ENST00000461159 MROH1Q8NDA8 1641 aa11.58□□□□□ -0.56
HDAC9-219ENST00000461159 CCDC144AA2RUR9 1427 aa11.58□□□□□ -0.56
HDAC9-219ENST00000461159 CCER2I3L3R5 266 aa11.57□□□□□ -0.56
HDAC9-219ENST00000461159 RBM10P98175 930 aaKnown RBP11.57□□□□□ -0.56
HDAC9-219ENST00000461159 RSPH6AQ9H0K4 717 aa11.57□□□□□ -0.56
HDAC9-219ENST00000461159 A0A0U1RQG5 324 aaPredicted RBP11.57□□□□□ -0.56
HDAC9-219ENST00000461159 CHGAP10645 457 aaKnown RBP11.57□□□□□ -0.56
HDAC9-219ENST00000461159 DEPDC5O75140 1603 aa11.57□□□□□ -0.56
HDAC9-219ENST00000461159 E9PCH4 1651 aa11.56□□□□□ -0.56
HDAC9-219ENST00000461159 RBM19Q9Y4C8 960 aaKnown RBP11.55□□□□□ -0.56
HDAC9-219ENST00000461159 UGGT1Q9NYU2 1555 aa11.55□□□□□ -0.56
HDAC9-219ENST00000461159 CEP152O94986 1710 aa11.54□□□□□ -0.56
HDAC9-219ENST00000461159 ANP32CO43423 234 aa11.54□□□□□ -0.56
HDAC9-219ENST00000461159 FBXO31Q5XUX0 539 aaPredicted RBP11.54□□□□□ -0.56
HDAC9-219ENST00000461159 ATP10AO60312 1499 aa11.54□□□□□ -0.56
HDAC9-219ENST00000461159 VWDEQ8N2E2 1590 aa11.54□□□□□ -0.56
HDAC9-219ENST00000461159 SIGLEC1Q9BZZ2 1709 aa11.54□□□□□ -0.56
HDAC9-219ENST00000461159 MSH5O43196 834 aa11.53□□□□□ -0.56
HDAC9-219ENST00000461159 PRDM15P57071 1507 aaPredicted RBP11.53□□□□□ -0.56
HDAC9-219ENST00000461159 NUTM2DQ5VT03 806 aaPredicted RBP11.52□□□□□ -0.56
HDAC9-219ENST00000461159 FANCIQ9NVI1 1328 aa11.52□□□□□ -0.57
HDAC9-219ENST00000461159 EIF2AK4Q9P2K8 1649 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms