RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 DNMT1P26358 1616 aaKnown RBP35.02■■■■□ 3.2
HMG20B-207ENST00000461099 FBXO31Q5XUX0 539 aaPredicted RBP35.01■■■■□ 3.2
HMG20B-207ENST00000461099 TNRQ92752 1358 aa34.99■■■■□ 3.19
HMG20B-207ENST00000461099 KDM5DQ9BY66 1539 aa34.98■■■■□ 3.19
HMG20B-207ENST00000461099 UBAP1LF5GYI3 381 aa34.98■■■■□ 3.19
HMG20B-207ENST00000461099 WASHC2CQ9Y4E1 1318 aa34.98■■■■□ 3.19
HMG20B-207ENST00000461099 FAM135AQ9P2D6 1515 aa34.97■■■■□ 3.19
HMG20B-207ENST00000461099 PZPP20742 1482 aa34.97■■■■□ 3.19
HMG20B-207ENST00000461099 TSPY4P0CV99 314 aa34.96■■■■□ 3.19
HMG20B-207ENST00000461099 TSPY10P0CW01 314 aa34.96■■■■□ 3.19
HMG20B-207ENST00000461099 ARHGEF5Q12774 1597 aa34.94■■■■□ 3.18
HMG20B-207ENST00000461099 SPATA31D1Q6ZQQ2 1576 aa34.94■■■■□ 3.18
HMG20B-207ENST00000461099 SOCS7O14512 581 aa34.88■■■■□ 3.17
HMG20B-207ENST00000461099 LRRC9Q6ZRR7 1453 aa34.87■■■■□ 3.17
HMG20B-207ENST00000461099 MIA2Q96PC5 1412 aa34.87■■■■□ 3.17
HMG20B-207ENST00000461099 POLR1AO95602 1720 aaPredicted RBP34.86■■■■□ 3.17
HMG20B-207ENST00000461099 VPS8Q8N3P4 1428 aa34.84■■■■□ 3.17
HMG20B-207ENST00000461099 THEMISQ8N1K5 641 aaPredicted RBP34.84■■■■□ 3.17
HMG20B-207ENST00000461099 NEURL4Q96JN8 1562 aa34.83■■■■□ 3.17
HMG20B-207ENST00000461099 ANKLE2Q86XL3 938 aa34.83■■■■□ 3.17
HMG20B-207ENST00000461099 NLRP1Q9C000 1473 aa34.82■■■■□ 3.16
HMG20B-207ENST00000461099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.81■■■■□ 3.16
HMG20B-207ENST00000461099 LOC105371045A0A1W2PR82 267 aa34.79■■■■□ 3.16
HMG20B-207ENST00000461099 UGGT1Q9NYU2 1555 aa34.77■■■■□ 3.16
HMG20B-207ENST00000461099 SHANK2Q9UPX8 1470 aa34.77■■■■□ 3.16
HMG20B-207ENST00000461099 CPS1P31327 1500 aa34.76■■■■□ 3.16
HMG20B-207ENST00000461099 MAST1Q9Y2H9 1570 aa34.76■■■■□ 3.16
HMG20B-207ENST00000461099 RNF17Q9BXT8 1623 aaKnown RBP34.75■■■■□ 3.15
HMG20B-207ENST00000461099 KANK4Q5T7N3 995 aaPredicted RBP34.75■■■■□ 3.15
HMG20B-207ENST00000461099 MAP3K1Q13233 1512 aa34.72■■■■□ 3.15
HMG20B-207ENST00000461099 ABCC3O15438 1527 aa34.71■■■■□ 3.15
HMG20B-207ENST00000461099 TOM1O60784 492 aa34.7■■■■□ 3.15
HMG20B-207ENST00000461099 MED14O60244 1454 aa34.7■■■■□ 3.15
HMG20B-207ENST00000461099 DEPDC5O75140 1603 aa34.7■■■■□ 3.14
HMG20B-207ENST00000461099 NPHP4O75161 1426 aaPredicted RBP34.69■■■■□ 3.14
HMG20B-207ENST00000461099 ZC3H13Q5T200 1668 aaKnown RBP34.69■■■■□ 3.14
HMG20B-207ENST00000461099 MYOM3Q5VTT5 1437 aa34.68■■■■□ 3.14
HMG20B-207ENST00000461099 EIF2AK4Q9P2K8 1649 aaKnown RBP34.68■■■■□ 3.14
HMG20B-207ENST00000461099 SCAF1Q9H7N4 1312 aaKnown RBP34.67■■■■□ 3.14
HMG20B-207ENST00000461099 VWDEQ8N2E2 1590 aa34.66■■■■□ 3.14
HMG20B-207ENST00000461099 PIP4K2BP78356 416 aa34.66■■■■□ 3.14
HMG20B-207ENST00000461099 HSPA1LP34931 641 aa34.62■■■■□ 3.13
HMG20B-207ENST00000461099 ERVK-7P63135 1459 aa34.62■■■■□ 3.13
HMG20B-207ENST00000461099 MROH1Q8NDA8 1641 aa34.62■■■■□ 3.13
HMG20B-207ENST00000461099 IQGAP1P46940 1657 aa34.59■■■■□ 3.13
HMG20B-207ENST00000461099 DUOX2Q9NRD8 1548 aa34.59■■■■□ 3.13
HMG20B-207ENST00000461099 CEP152O94986 1710 aa34.55■■■■□ 3.12
HMG20B-207ENST00000461099 CFAP65Q6ZU64 1925 aaKnown RBP34.54■■■■□ 3.12
HMG20B-207ENST00000461099 KIF15Q9NS87 1388 aa34.51■■■■□ 3.12
HMG20B-207ENST00000461099 ABCC5O15440 1437 aa34.49■■■■□ 3.11
HMG20B-207ENST00000461099 RRP7BPQ9NSQ0 103 aa34.49■■■■□ 3.11
HMG20B-207ENST00000461099 UBR1Q8IWV7 1749 aa34.49■■■■□ 3.11
HMG20B-207ENST00000461099 ALKQ9UM73 1620 aa34.47■■■■□ 3.11
HMG20B-207ENST00000461099 ARHGAP31Q2M1Z3 1444 aa34.47■■■■□ 3.11
HMG20B-207ENST00000461099 STRCP1A6NGW2 1772 aa34.46■■■■□ 3.11
HMG20B-207ENST00000461099 ERBINQ96RT1 1412 aa34.46■■■■□ 3.11
HMG20B-207ENST00000461099 PRDM15P57071 1507 aaPredicted RBP34.45■■■■□ 3.11
HMG20B-207ENST00000461099 APLP2Q06481 763 aa34.45■■■■□ 3.11
HMG20B-207ENST00000461099 LRRC7Q96NW7 1537 aa34.45■■■■□ 3.1
HMG20B-207ENST00000461099 SCAF11Q99590 1463 aaKnown RBP34.44■■■■□ 3.1
HMG20B-207ENST00000461099 PTPN23Q9H3S7 1636 aa34.44■■■■□ 3.1
HMG20B-207ENST00000461099 CROCC2H7BZ55 1655 aa34.44■■■■□ 3.1
HMG20B-207ENST00000461099 MED1Q15648 1581 aaPredicted RBP34.43■■■■□ 3.1
HMG20B-207ENST00000461099 LTKP29376 864 aa34.42■■■■□ 3.1
HMG20B-207ENST00000461099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.42■■■■□ 3.12e-7■□□□□ 9.7
HMG20B-207ENST00000461099 TXNDC2Q86VQ3 553 aa34.41■■■■□ 3.1
HMG20B-207ENST00000461099 ARHGAP23Q9P227 1491 aa34.39■■■■□ 3.1
HMG20B-207ENST00000461099 SLIT1O75093 1534 aa34.39■■■■□ 3.1
HMG20B-207ENST00000461099 DAPK1P53355 1430 aa34.38■■■■□ 3.09
HMG20B-207ENST00000461099 SYNMO15061 1565 aa34.38■■■■□ 3.09
HMG20B-207ENST00000461099 EID1Q9Y6B2 187 aa34.36■■■■□ 3.09
HMG20B-207ENST00000461099 KANK1Q14678 1352 aa34.36■■■■□ 3.09
HMG20B-207ENST00000461099 FGD6Q6ZV73 1430 aa34.34■■■■□ 3.09
HMG20B-207ENST00000461099 CHIC2Q9UKJ5 165 aa34.3■■■■□ 3.08
HMG20B-207ENST00000461099 ANKRD30AQ9BXX3 1397 aa34.3■■■■□ 3.08
HMG20B-207ENST00000461099 PIK3C2BO00750 1634 aa34.3■■■■□ 3.08
HMG20B-207ENST00000461099 STAG3Q9UJ98 1225 aa34.29■■■■□ 3.08
HMG20B-207ENST00000461099 TMEM2Q9UHN6 1383 aa34.28■■■■□ 3.08
HMG20B-207ENST00000461099 SENP3Q9H4L4 574 aaPredicted RBP34.27■■■■□ 3.08
HMG20B-207ENST00000461099 LMTK2Q8IWU2 1503 aa34.25■■■■□ 3.07
HMG20B-207ENST00000461099 IDI1Q13907 227 aa34.24■■■■□ 3.07
HMG20B-207ENST00000461099 PHF23Q9BUL5 403 aaPredicted RBP34.23■■■■□ 3.07
HMG20B-207ENST00000461099 KDM5AP29375 1690 aaKnown RBP34.21■■■■□ 3.07
HMG20B-207ENST00000461099 EFCAB6Q5THR3 1501 aa34.2■■■■□ 3.06
HMG20B-207ENST00000461099 XIRP1Q702N8 1843 aaKnown RBP34.18■■■■□ 3.06
HMG20B-207ENST00000461099 NOS1P29475 1434 aa34.14■■■■□ 3.06
HMG20B-207ENST00000461099 ADGRL2O95490 1459 aa34.12■■■■□ 3.05
HMG20B-207ENST00000461099 KCNA6P17658 529 aa34.11■■■■□ 3.05
HMG20B-207ENST00000461099 SLC26A8Q96RN1 970 aa34.1■■■■□ 3.05
HMG20B-207ENST00000461099 SLC52A1Q9NWF4 448 aa34.1■■■■□ 3.05
HMG20B-207ENST00000461099 TET3O43151 1660 aa34.09■■■■□ 3.05
HMG20B-207ENST00000461099 FAM50AQ14320 339 aaKnown RBP34.08■■■■□ 3.05
HMG20B-207ENST00000461099 TMEM94Q12767 1356 aa34.08■■■■□ 3.05
HMG20B-207ENST00000461099 FAM135BQ49AJ0 1406 aa34.06■■■■□ 3.04
HMG20B-207ENST00000461099 ADGRB3O60242 1522 aa34.06■■■■□ 3.04
HMG20B-207ENST00000461099 PROSER2Q86WR7 435 aaPredicted RBP34.05■■■■□ 3.04
HMG20B-207ENST00000461099 ANKRD50Q9ULJ7 1429 aa34.04■■■■□ 3.04
HMG20B-207ENST00000461099 RPRD2Q5VT52 1461 aaKnown RBP34.01■■■■□ 3.04
HMG20B-207ENST00000461099 RBM33Q96EV2 1170 aaKnown RBP33.99■■■■□ 3.03
HMG20B-207ENST00000461099 BCANQ96GW7 911 aa33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms