RNA–Protein interactions for RNA: ENST00000461055.2

NEDD9-206, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-206ENST00000461055 PPP1R15AO75807 674 aaPredicted RBP15.84■□□□□ 0.13
NEDD9-206ENST00000461055 AFAP1Q8N556 730 aa15.84■□□□□ 0.13
NEDD9-206ENST00000461055 KDM5DQ9BY66 1539 aa15.84■□□□□ 0.13
NEDD9-206ENST00000461055 ANKRD30BQ9BXX2 1392 aa15.82■□□□□ 0.12
NEDD9-206ENST00000461055 ZFYVE16Q7Z3T8 1539 aa15.82■□□□□ 0.12
NEDD9-206ENST00000461055 DUOX2Q9NRD8 1548 aa15.82■□□□□ 0.12
NEDD9-206ENST00000461055 CFAP74Q9C0B2 1584 aa15.8■□□□□ 0.12
NEDD9-206ENST00000461055 PZPP20742 1482 aa15.8■□□□□ 0.12
NEDD9-206ENST00000461055 POGZQ7Z3K3 1410 aa15.8■□□□□ 0.12
NEDD9-206ENST00000461055 ERBINQ96RT1 1412 aa15.8■□□□□ 0.12
NEDD9-206ENST00000461055 DIEXFQ68CQ4 756 aaKnown RBP15.8■□□□□ 0.12
NEDD9-206ENST00000461055 CERKQ8TCT0 537 aa15.8■□□□□ 0.12
NEDD9-206ENST00000461055 ARHGEF12Q9NZN5 1544 aa15.79■□□□□ 0.12
NEDD9-206ENST00000461055 NUP155O75694 1391 aa15.79■□□□□ 0.12
NEDD9-206ENST00000461055 SPAG9O60271 1321 aaKnown RBP15.79■□□□□ 0.12
NEDD9-206ENST00000461055 ZMYM4Q5VZL5 1548 aa15.78■□□□□ 0.12
NEDD9-206ENST00000461055 MYT1LQ9UL68 1186 aa15.78■□□□□ 0.12
NEDD9-206ENST00000461055 ATP10AO60312 1499 aa15.78■□□□□ 0.12
NEDD9-206ENST00000461055 RPRD2Q5VT52 1461 aaKnown RBP15.77■□□□□ 0.11
NEDD9-206ENST00000461055 MAGI2Q86UL8 1455 aa15.76■□□□□ 0.11
NEDD9-206ENST00000461055 TRAPPC8Q9Y2L5 1435 aa15.76■□□□□ 0.11
NEDD9-206ENST00000461055 PKD2Q13563 968 aa15.74■□□□□ 0.11
NEDD9-206ENST00000461055 UNC13BO14795 1591 aa15.72■□□□□ 0.11
NEDD9-206ENST00000461055 FER1L4A9Z1Z3 1794 aa15.72■□□□□ 0.11
NEDD9-206ENST00000461055 ZNF518AQ6AHZ1 1483 aa15.71■□□□□ 0.11
NEDD9-206ENST00000461055 ATP7AQ04656 1500 aa15.68■□□□□ 0.1
NEDD9-206ENST00000461055 FAM135AQ9P2D6 1515 aa15.68■□□□□ 0.1
NEDD9-206ENST00000461055 INO80Q9ULG1 1556 aaPredicted RBP15.68■□□□□ 0.1
NEDD9-206ENST00000461055 IQGAP3Q86VI3 1631 aa15.67■□□□□ 0.1
NEDD9-206ENST00000461055 DHX29Q7Z478 1369 aaKnown RBP15.66■□□□□ 0.1
NEDD9-206ENST00000461055 FOXD1Q16676 465 aa15.66■□□□□ 0.1
NEDD9-206ENST00000461055 MLH3Q9UHC1 1453 aa15.65■□□□□ 0.1
NEDD9-206ENST00000461055 ILDR2Q71H61 639 aa15.65■□□□□ 0.1
NEDD9-206ENST00000461055 L3MBTL2Q969R5 705 aa15.65■□□□□ 0.1
NEDD9-206ENST00000461055 KANK1Q14678 1352 aa15.64■□□□□ 0.09
NEDD9-206ENST00000461055 STRCQ7RTU9 1775 aa15.64■□□□□ 0.09
NEDD9-206ENST00000461055 EIF2AK4Q9P2K8 1649 aaKnown RBP15.64■□□□□ 0.09
NEDD9-206ENST00000461055 KDM5CP41229 1560 aa15.62■□□□□ 0.09
NEDD9-206ENST00000461055 DIP2CQ9Y2E4 1556 aa15.62■□□□□ 0.09
NEDD9-206ENST00000461055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.6■□□□□ 0.09
NEDD9-206ENST00000461055 DEPDC5O75140 1603 aa15.6■□□□□ 0.09
NEDD9-206ENST00000461055 ABCA6Q8N139 1617 aa15.6■□□□□ 0.09
NEDD9-206ENST00000461055 PREX1Q8TCU6 1659 aa15.6■□□□□ 0.09
NEDD9-206ENST00000461055 UHRF1BP1Q6BDS2 1440 aa15.6■□□□□ 0.09
NEDD9-206ENST00000461055 SETD1BQ9UPS6 1966 aaKnown RBP15.59■□□□□ 0.09
NEDD9-206ENST00000461055 ESF1Q9H501 851 aaKnown RBP15.59■□□□□ 0.09
NEDD9-206ENST00000461055 DMRT2Q9Y5R5 561 aa15.59■□□□□ 0.09
NEDD9-206ENST00000461055 STAC3Q96MF2 364 aa15.58■□□□□ 0.08
NEDD9-206ENST00000461055 CCDC144AA2RUR9 1427 aa15.58■□□□□ 0.08
NEDD9-206ENST00000461055 A2MP01023 1474 aa15.58■□□□□ 0.08
NEDD9-206ENST00000461055 DISP3Q9P2K9 1392 aa15.57■□□□□ 0.08
NEDD9-206ENST00000461055 KIDINS220Q9ULH0 1771 aa15.57■□□□□ 0.08
NEDD9-206ENST00000461055 EIF4G2P78344 907 aaKnown RBP eCLIP15.56■□□□□ 0.08
NEDD9-206ENST00000461055 NCKAP5LQ9HCH0 1330 aa15.56■□□□□ 0.08
NEDD9-206ENST00000461055 VWDEQ8N2E2 1590 aa15.56■□□□□ 0.08
NEDD9-206ENST00000461055 C3P01024 1663 aa15.56■□□□□ 0.08
NEDD9-206ENST00000461055 KIF3BO15066 747 aa15.55■□□□□ 0.08
NEDD9-206ENST00000461055 PRDM15P57071 1507 aaPredicted RBP15.53■□□□□ 0.08
NEDD9-206ENST00000461055 ZMYM3Q14202 1370 aa15.52■□□□□ 0.08
NEDD9-206ENST00000461055 TET3O43151 1660 aa15.52■□□□□ 0.08
NEDD9-206ENST00000461055 LMTK2Q8IWU2 1503 aa15.52■□□□□ 0.07
NEDD9-206ENST00000461055 PTPRTO14522 1441 aa15.51■□□□□ 0.07
NEDD9-206ENST00000461055 AGLP35573 1532 aa15.51■□□□□ 0.07
NEDD9-206ENST00000461055 PLA2R1Q13018 1463 aa15.51■□□□□ 0.07
NEDD9-206ENST00000461055 RNF17Q9BXT8 1623 aaKnown RBP15.5■□□□□ 0.07
NEDD9-206ENST00000461055 REREQ9P2R6 1566 aa15.5■□□□□ 0.07
NEDD9-206ENST00000461055 GGT6Q6P531 493 aa15.5■□□□□ 0.07
NEDD9-206ENST00000461055 NBPF8Q3BBV2 869 aa15.49■□□□□ 0.07
NEDD9-206ENST00000461055 LTBP4Q8N2S1 1624 aa15.49■□□□□ 0.07
NEDD9-206ENST00000461055 ZNF335Q9H4Z2 1342 aaPredicted RBP15.48■□□□□ 0.07
NEDD9-206ENST00000461055 TRPM2O94759 1503 aa15.48■□□□□ 0.07
NEDD9-206ENST00000461055 HSPA5P11021 654 aaKnown RBP15.47■□□□□ 0.07
NEDD9-206ENST00000461055 NEURL4Q96JN8 1562 aa15.47■□□□□ 0.07
NEDD9-206ENST00000461055 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
NEDD9-206ENST00000461055 RALGAPBQ86X10 1494 aa15.46■□□□□ 0.06
NEDD9-206ENST00000461055 MIER1Q8N108 512 aa15.45■□□□□ 0.06
NEDD9-206ENST00000461055 DCAF11Q8TEB1 546 aa15.45■□□□□ 0.06
NEDD9-206ENST00000461055 CAMSAP1Q5T5Y3 1602 aa15.45■□□□□ 0.06
NEDD9-206ENST00000461055 MROH1Q8NDA8 1641 aa15.45■□□□□ 0.06
NEDD9-206ENST00000461055 E9PCH4 1651 aa15.44■□□□□ 0.06
NEDD9-206ENST00000461055 SOCS7O14512 581 aa15.44■□□□□ 0.06
NEDD9-206ENST00000461055 SPATA31E1Q6ZUB1 1445 aa15.43■□□□□ 0.06
NEDD9-206ENST00000461055 CNTLNQ9NXG0 1405 aa15.43■□□□□ 0.06
NEDD9-206ENST00000461055 EFCAB6Q5THR3 1501 aa15.43■□□□□ 0.06
NEDD9-206ENST00000461055 UBAP1LF5GYI3 381 aa15.42■□□□□ 0.06
NEDD9-206ENST00000461055 FBXO31Q5XUX0 539 aaPredicted RBP15.42■□□□□ 0.06
NEDD9-206ENST00000461055 SPHKAPQ2M3C7 1700 aa15.42■□□□□ 0.06
NEDD9-206ENST00000461055 DDX10Q13206 875 aaKnown RBP15.4■□□□□ 0.06
NEDD9-206ENST00000461055 NPATQ14207 1427 aa15.4■□□□□ 0.06
NEDD9-206ENST00000461055 PRAG1Q86YV5 1406 aa15.4■□□□□ 0.06
NEDD9-206ENST00000461055 WASHC2CQ9Y4E1 1318 aa15.4■□□□□ 0.06
NEDD9-206ENST00000461055 CLTCQ00610 1675 aaKnown RBP15.39■□□□□ 0.05
NEDD9-206ENST00000461055 ARHGAP31Q2M1Z3 1444 aa15.39■□□□□ 0.05
NEDD9-206ENST00000461055 CARD11Q9BXL7 1154 aa15.38■□□□□ 0.05
NEDD9-206ENST00000461055 KDM2AQ9Y2K7 1162 aa15.38■□□□□ 0.05
NEDD9-206ENST00000461055 ZC3H13Q5T200 1668 aaKnown RBP15.38■□□□□ 0.05
NEDD9-206ENST00000461055 GPRASP1Q5JY77 1395 aa15.37■□□□□ 0.05
NEDD9-206ENST00000461055 USP47Q96K76 1375 aa15.37■□□□□ 0.05
NEDD9-206ENST00000461055 CENPBP07199 599 aaPredicted RBP15.37■□□□□ 0.05
NEDD9-206ENST00000461055 RGL3Q3MIN7 710 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms