RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 ARAP3Q8WWN8 1544 aa11.41□□□□□ -0.58
RTN4-212ENST00000461004 MYO5CQ9NQX4 1742 aa11.41□□□□□ -0.58
RTN4-212ENST00000461004 CDC42BPBQ9Y5S2 1711 aa11.41□□□□□ -0.58
RTN4-212ENST00000461004 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
RTN4-212ENST00000461004 CFDP1Q9UEE9 299 aaPredicted RBP11.41□□□□□ -0.58
RTN4-212ENST00000461004 SCAPERQ9BY12 1400 aa11.41□□□□□ -0.58
RTN4-212ENST00000461004 EVX2Q03828 476 aa11.4□□□□□ -0.58
RTN4-212ENST00000461004 CDC42BPAQ5VT25 1732 aa11.4□□□□□ -0.58
RTN4-212ENST00000461004 PHLDB1Q86UU1 1377 aa11.4□□□□□ -0.59
RTN4-212ENST00000461004 ARHGEF12Q9NZN5 1544 aa11.4□□□□□ -0.59
RTN4-212ENST00000461004 MAP3K13O43283 966 aa11.39□□□□□ -0.59
RTN4-212ENST00000461004 CHGAP10645 457 aaKnown RBP11.39□□□□□ -0.59
RTN4-212ENST00000461004 HNRNPMP52272 730 aaKnown RBP eCLIP11.39□□□□□ -0.59
RTN4-212ENST00000461004 AFAP1Q8N556 730 aa11.39□□□□□ -0.59
RTN4-212ENST00000461004 PCDHB8Q9UN66 801 aa11.39□□□□□ -0.59
RTN4-212ENST00000461004 PCDHB13Q9Y5F0 798 aa11.39□□□□□ -0.59
RTN4-212ENST00000461004 PREX2Q70Z35 1606 aa11.38□□□□□ -0.59
RTN4-212ENST00000461004 ADGRL1O94910 1474 aa11.38□□□□□ -0.59
RTN4-212ENST00000461004 FRMPD1Q5SYB0 1578 aa11.38□□□□□ -0.59
RTN4-212ENST00000461004 DENND4BO75064 1496 aaPredicted RBP11.38□□□□□ -0.59
RTN4-212ENST00000461004 TRAPPC8Q9Y2L5 1435 aa11.37□□□□□ -0.59
RTN4-212ENST00000461004 SUPT6HQ7KZ85 1726 aaKnown RBP11.37□□□□□ -0.59
RTN4-212ENST00000461004 HS6ST3Q8IZP7 471 aa11.36□□□□□ -0.59
RTN4-212ENST00000461004 SAMD9LQ8IVG5 1584 aa11.36□□□□□ -0.59
RTN4-212ENST00000461004 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
RTN4-212ENST00000461004 IFNL1Q8IU54 200 aa11.35□□□□□ -0.59
RTN4-212ENST00000461004 ZNF579Q8NAF0 562 aaKnown RBP11.35□□□□□ -0.59
RTN4-212ENST00000461004 CFAP74Q9C0B2 1584 aa11.35□□□□□ -0.59
RTN4-212ENST00000461004 POGZQ7Z3K3 1410 aa11.35□□□□□ -0.59
RTN4-212ENST00000461004 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.34□□□□□ -0.59
RTN4-212ENST00000461004 ZFP91Q96JP5 570 aaPredicted RBP11.34□□□□□ -0.59
RTN4-212ENST00000461004 RICTORQ6R327 1708 aa11.34□□□□□ -0.59
RTN4-212ENST00000461004 ABCC1P33527 1531 aa11.34□□□□□ -0.59
RTN4-212ENST00000461004 HAX1O00165 279 aa11.33□□□□□ -0.6
RTN4-212ENST00000461004 YEATS2Q9ULM3 1422 aa11.33□□□□□ -0.6
RTN4-212ENST00000461004 SYCP2Q9BX26 1530 aa11.32□□□□□ -0.6
RTN4-212ENST00000461004 POTEHQ6S545 545 aa11.32□□□□□ -0.6
RTN4-212ENST00000461004 BBXQ8WY36 941 aaPredicted RBP11.32□□□□□ -0.6
RTN4-212ENST00000461004 SGIP1Q9BQI5 828 aa11.32□□□□□ -0.6
RTN4-212ENST00000461004 MYOM3Q5VTT5 1437 aa11.32□□□□□ -0.6
RTN4-212ENST00000461004 ZNF467Q7Z7K2 595 aaPredicted RBP11.31□□□□□ -0.6
RTN4-212ENST00000461004 MBD5Q9P267 1494 aa11.31□□□□□ -0.6
RTN4-212ENST00000461004 MYT1LQ9UL68 1186 aa11.3□□□□□ -0.6
RTN4-212ENST00000461004 CAMSAP2Q08AD1 1489 aa11.3□□□□□ -0.6
RTN4-212ENST00000461004 ITSN2Q9NZM3 1697 aa11.3□□□□□ -0.6
RTN4-212ENST00000461004 KIAA1107Q9UPP5 1409 aa11.29□□□□□ -0.6
RTN4-212ENST00000461004 STK25O00506 426 aa11.29□□□□□ -0.6
RTN4-212ENST00000461004 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
RTN4-212ENST00000461004 ZNF518AQ6AHZ1 1483 aa11.28□□□□□ -0.6
RTN4-212ENST00000461004 KDM4FA0A1W2PPD8 638 aa11.28□□□□□ -0.6
RTN4-212ENST00000461004 NKX1-1Q15270 411 aaPredicted RBP11.28□□□□□ -0.6
RTN4-212ENST00000461004 BCL11BQ9C0K0 894 aaPredicted RBP11.28□□□□□ -0.6
RTN4-212ENST00000461004 ZMYM4Q5VZL5 1548 aa11.28□□□□□ -0.6
RTN4-212ENST00000461004 KDM5CP41229 1560 aa11.28□□□□□ -0.6
RTN4-212ENST00000461004 FGD6Q6ZV73 1430 aa11.27□□□□□ -0.6
RTN4-212ENST00000461004 MIA2Q96PC5 1412 aa11.27□□□□□ -0.6
RTN4-212ENST00000461004 PLEKHH2Q8IVE3 1493 aa11.27□□□□□ -0.6
RTN4-212ENST00000461004 MS4A3Q96HJ5 214 aa11.27□□□□□ -0.61
RTN4-212ENST00000461004 TRPC6Q9Y210 931 aa11.27□□□□□ -0.61
RTN4-212ENST00000461004 SPAG9O60271 1321 aaKnown RBP11.27□□□□□ -0.61
RTN4-212ENST00000461004 ZFYVE16Q7Z3T8 1539 aa11.26□□□□□ -0.61
RTN4-212ENST00000461004 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
RTN4-212ENST00000461004 PDAP1Q13442 181 aaKnown RBP11.26□□□□□ -0.61
RTN4-212ENST00000461004 TAOK2Q9UL54 1235 aa11.26□□□□□ -0.61
RTN4-212ENST00000461004 MLH3Q9UHC1 1453 aa11.25□□□□□ -0.61
RTN4-212ENST00000461004 PSEN1P49768 467 aa11.25□□□□□ -0.61
RTN4-212ENST00000461004 FAM50AQ14320 339 aaKnown RBP11.25□□□□□ -0.61
RTN4-212ENST00000461004 STK24Q9Y6E0 443 aa11.25□□□□□ -0.61
RTN4-212ENST00000461004 SIGLEC1Q9BZZ2 1709 aa11.25□□□□□ -0.61
RTN4-212ENST00000461004 ARID4BQ4LE39 1312 aaPredicted RBP11.25□□□□□ -0.61
RTN4-212ENST00000461004 MAGI2Q86UL8 1455 aa11.25□□□□□ -0.61
RTN4-212ENST00000461004 MLECQ14165 292 aa11.24□□□□□ -0.61
RTN4-212ENST00000461004 ATP10AO60312 1499 aa11.24□□□□□ -0.61
RTN4-212ENST00000461004 ARHGEF40Q8TER5 1519 aa11.24□□□□□ -0.61
RTN4-212ENST00000461004 PTPN23Q9H3S7 1636 aa11.24□□□□□ -0.61
RTN4-212ENST00000461004 KIDINS220Q9ULH0 1771 aa11.23□□□□□ -0.61
RTN4-212ENST00000461004 ABCC5O15440 1437 aa11.23□□□□□ -0.61
RTN4-212ENST00000461004 TCOF1Q13428 1488 aaKnown RBP11.23□□□□□ -0.61
RTN4-212ENST00000461004 CCDC141Q6ZP82 1450 aa11.23□□□□□ -0.61
RTN4-212ENST00000461004 HECW2Q9P2P5 1572 aa11.23□□□□□ -0.61
RTN4-212ENST00000461004 ABCA6Q8N139 1617 aa11.22□□□□□ -0.61
RTN4-212ENST00000461004 DIP2CQ9Y2E4 1556 aa11.22□□□□□ -0.61
RTN4-212ENST00000461004 TSPY4P0CV99 314 aa11.21□□□□□ -0.61
RTN4-212ENST00000461004 TSPY10P0CW01 314 aa11.21□□□□□ -0.61
RTN4-212ENST00000461004 RSPH4AQ5TD94 716 aa11.21□□□□□ -0.61
RTN4-212ENST00000461004 PAXIP1Q6ZW49 1069 aaPredicted RBP11.21□□□□□ -0.61
RTN4-212ENST00000461004 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.21□□□□□ -0.61
RTN4-212ENST00000461004 CHIC2Q9UKJ5 165 aa11.21□□□□□ -0.61
RTN4-212ENST00000461004 ARHGEF5Q12774 1597 aa11.2□□□□□ -0.62
RTN4-212ENST00000461004 ATP7AQ04656 1500 aa11.2□□□□□ -0.62
RTN4-212ENST00000461004 C9orf84Q5VXU9 1444 aa11.2□□□□□ -0.62
RTN4-212ENST00000461004 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
RTN4-212ENST00000461004 INO80Q9ULG1 1556 aaPredicted RBP11.2□□□□□ -0.62
RTN4-212ENST00000461004 PTPRKQ15262 1439 aa11.19□□□□□ -0.62
RTN4-212ENST00000461004 ITGAEP38570 1179 aa11.19□□□□□ -0.62
RTN4-212ENST00000461004 RTEL1-TNFRSF6BF6WH68 1400 aa11.18□□□□□ -0.62
RTN4-212ENST00000461004 DAPK1P53355 1430 aa11.18□□□□□ -0.62
RTN4-212ENST00000461004 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
RTN4-212ENST00000461004 RRP7BPQ9NSQ0 103 aa11.17□□□□□ -0.62
RTN4-212ENST00000461004 A2MP01023 1474 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms