RNA–Protein interactions for RNA: ENST00000460721.1

LDOC1-202, Transcript of LDOC1, regulator of NFKB signaling, humanhuman

TSL 1 (best)

Gene LDOC1, Length 784 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDOC1-202ENST00000460721 RNF17Q9BXT8 1623 aaKnown RBP23.81■■□□□ 1.4
LDOC1-202ENST00000460721 NPATQ14207 1427 aa23.78■■□□□ 1.4
LDOC1-202ENST00000460721 ADGRL2O95490 1459 aa23.77■■□□□ 1.4
LDOC1-202ENST00000460721 KIF15Q9NS87 1388 aa23.77■■□□□ 1.4
LDOC1-202ENST00000460721 PTPRKQ15262 1439 aa23.76■■□□□ 1.39
LDOC1-202ENST00000460721 NCOA1Q15788 1441 aa23.76■■□□□ 1.39
LDOC1-202ENST00000460721 KDM5DQ9BY66 1539 aa23.75■■□□□ 1.39
LDOC1-202ENST00000460721 MROH1Q8NDA8 1641 aa23.75■■□□□ 1.39
LDOC1-202ENST00000460721 ERBINQ96RT1 1412 aa23.75■■□□□ 1.39
LDOC1-202ENST00000460721 FAM50AQ14320 339 aaKnown RBP23.74■■□□□ 1.39
LDOC1-202ENST00000460721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.74■■□□□ 1.39
LDOC1-202ENST00000460721 UHRF1BP1Q6BDS2 1440 aa23.74■■□□□ 1.39
LDOC1-202ENST00000460721 PPARGC1BQ86YN6 1023 aaKnown RBP23.73■■□□□ 1.39
LDOC1-202ENST00000460721 RRP7BPQ9NSQ0 103 aa23.73■■□□□ 1.39
LDOC1-202ENST00000460721 ANKRD30AQ9BXX3 1397 aa23.73■■□□□ 1.39
LDOC1-202ENST00000460721 HSPA2P54652 639 aa23.72■■□□□ 1.39
LDOC1-202ENST00000460721 CHIC2Q9UKJ5 165 aa23.71■■□□□ 1.39
LDOC1-202ENST00000460721 WASHC2CQ9Y4E1 1318 aa23.7■■□□□ 1.38
LDOC1-202ENST00000460721 ZC3H13Q5T200 1668 aaKnown RBP23.7■■□□□ 1.38
LDOC1-202ENST00000460721 DEPDC5O75140 1603 aa23.68■■□□□ 1.38
LDOC1-202ENST00000460721 ABCC3O15438 1527 aa23.68■■□□□ 1.38
LDOC1-202ENST00000460721 PZPP20742 1482 aa23.68■■□□□ 1.38
LDOC1-202ENST00000460721 PRDM15P57071 1507 aaPredicted RBP23.66■■□□□ 1.38
LDOC1-202ENST00000460721 RRBP1Q9P2E9 1410 aaKnown RBP23.65■■□□□ 1.38
LDOC1-202ENST00000460721 MYO3AQ8NEV4 1616 aa23.63■■□□□ 1.37
LDOC1-202ENST00000460721 ZNF142P52746 1687 aaPredicted RBP23.63■■□□□ 1.37
LDOC1-202ENST00000460721 STRCQ7RTU9 1775 aa23.63■■□□□ 1.37
LDOC1-202ENST00000460721 ROCK1Q13464 1354 aa23.62■■□□□ 1.37
LDOC1-202ENST00000460721 CEP152O94986 1710 aa23.62■■□□□ 1.37
LDOC1-202ENST00000460721 FBXO31Q5XUX0 539 aaPredicted RBP23.61■■□□□ 1.37
LDOC1-202ENST00000460721 VWDEQ8N2E2 1590 aa23.61■■□□□ 1.37
LDOC1-202ENST00000460721 CAMSAP1Q5T5Y3 1602 aa23.59■■□□□ 1.37
LDOC1-202ENST00000460721 ANKRD50Q9ULJ7 1429 aa23.59■■□□□ 1.37
LDOC1-202ENST00000460721 ARHGAP31Q2M1Z3 1444 aa23.58■■□□□ 1.36
LDOC1-202ENST00000460721 CEP170BQ9Y4F5 1589 aaPredicted RBP23.57■■□□□ 1.36
LDOC1-202ENST00000460721 LMTK2Q8IWU2 1503 aa23.57■■□□□ 1.36
LDOC1-202ENST00000460721 SPATA31D1Q6ZQQ2 1576 aa23.57■■□□□ 1.36
LDOC1-202ENST00000460721 TNRQ92752 1358 aa23.56■■□□□ 1.36
LDOC1-202ENST00000460721 A2ML1A8K2U0 1454 aa23.56■■□□□ 1.36
LDOC1-202ENST00000460721 ERVK-7P63135 1459 aa23.52■■□□□ 1.36
LDOC1-202ENST00000460721 KANK1Q14678 1352 aa23.52■■□□□ 1.36
LDOC1-202ENST00000460721 CFAP65Q6ZU64 1925 aaKnown RBP23.51■■□□□ 1.35
LDOC1-202ENST00000460721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.51■■□□□ 1.35
LDOC1-202ENST00000460721 PLA2R1Q13018 1463 aa23.5■■□□□ 1.35
LDOC1-202ENST00000460721 NLRP1Q9C000 1473 aa23.5■■□□□ 1.35
LDOC1-202ENST00000460721 PTPRTO14522 1441 aa23.49■■□□□ 1.35
LDOC1-202ENST00000460721 UNC13BO14795 1591 aa23.48■■□□□ 1.35
LDOC1-202ENST00000460721 DMRT2Q9Y5R5 561 aa23.48■■□□□ 1.35
LDOC1-202ENST00000460721 ITGAEP38570 1179 aa23.47■■□□□ 1.35
LDOC1-202ENST00000460721 EFCAB6Q5THR3 1501 aa23.44■■□□□ 1.34
LDOC1-202ENST00000460721 CERKQ8TCT0 537 aa23.44■■□□□ 1.34
LDOC1-202ENST00000460721 UGGT1Q9NYU2 1555 aa23.42■■□□□ 1.34
LDOC1-202ENST00000460721 PKD2Q13563 968 aa23.41■■□□□ 1.34
LDOC1-202ENST00000460721 TET3O43151 1660 aa23.41■■□□□ 1.34
LDOC1-202ENST00000460721 NOS1P29475 1434 aa23.4■■□□□ 1.34
LDOC1-202ENST00000460721 NCKAP5LQ9HCH0 1330 aa23.39■■□□□ 1.34
LDOC1-202ENST00000460721 THEMISQ8N1K5 641 aaPredicted RBP23.39■■□□□ 1.33
LDOC1-202ENST00000460721 IQGAP3Q86VI3 1631 aa23.39■■□□□ 1.33
LDOC1-202ENST00000460721 GCC2Q8IWJ2 1684 aa23.38■■□□□ 1.33
LDOC1-202ENST00000460721 RPRD2Q5VT52 1461 aaKnown RBP23.38■■□□□ 1.33
LDOC1-202ENST00000460721 NAIPQ13075 1403 aa23.38■■□□□ 1.33
LDOC1-202ENST00000460721 UBR1Q8IWV7 1749 aa23.36■■□□□ 1.33
LDOC1-202ENST00000460721 SYNMO15061 1565 aa23.35■■□□□ 1.33
LDOC1-202ENST00000460721 POLR1AO95602 1720 aaPredicted RBP23.35■■□□□ 1.33
LDOC1-202ENST00000460721 NEURL4Q96JN8 1562 aa23.34■■□□□ 1.33
LDOC1-202ENST00000460721 KDM5AP29375 1690 aaKnown RBP23.33■■□□□ 1.33
LDOC1-202ENST00000460721 HFM1A2PYH4 1435 aa23.33■■□□□ 1.32
LDOC1-202ENST00000460721 E9PCH4 1651 aa23.32■■□□□ 1.32
LDOC1-202ENST00000460721 NUP155O75694 1391 aa23.31■■□□□ 1.32
LDOC1-202ENST00000460721 PIK3C2BO00750 1634 aa23.31■■□□□ 1.32
LDOC1-202ENST00000460721 MED14O60244 1454 aa23.3■■□□□ 1.32
LDOC1-202ENST00000460721 IDI1Q13907 227 aa23.3■■□□□ 1.32
LDOC1-202ENST00000460721 ANKLE2Q86XL3 938 aa23.3■■□□□ 1.32
LDOC1-202ENST00000460721 ARHGAP23Q9P227 1491 aa23.3■■□□□ 1.32
LDOC1-202ENST00000460721 LTBP4Q8N2S1 1624 aa23.29■■□□□ 1.32
LDOC1-202ENST00000460721 SLIT1O75093 1534 aa23.28■■□□□ 1.32
LDOC1-202ENST00000460721 ILDR2Q71H61 639 aa23.28■■□□□ 1.32
LDOC1-202ENST00000460721 SLC52A1Q9NWF4 448 aa23.28■■□□□ 1.32
LDOC1-202ENST00000460721 DISP3Q9P2K9 1392 aa23.24■■□□□ 1.31
LDOC1-202ENST00000460721 NPHP4O75161 1426 aaPredicted RBP23.22■■□□□ 1.31
LDOC1-202ENST00000460721 TMEM2Q9UHN6 1383 aa23.21■■□□□ 1.31
LDOC1-202ENST00000460721 ADGRB3O60242 1522 aa23.21■■□□□ 1.31
LDOC1-202ENST00000460721 LTKP29376 864 aa23.2■■□□□ 1.3
LDOC1-202ENST00000460721 IQGAP1P46940 1657 aa23.19■■□□□ 1.3
LDOC1-202ENST00000460721 SCAF11Q99590 1463 aaKnown RBP23.19■■□□□ 1.3
LDOC1-202ENST00000460721 ZNF335Q9H4Z2 1342 aaPredicted RBP23.18■■□□□ 1.3
LDOC1-202ENST00000460721 SOCS7O14512 581 aa23.18■■□□□ 1.3
LDOC1-202ENST00000460721 TMEM131LA2VDJ0 1609 aa23.17■■□□□ 1.3
LDOC1-202ENST00000460721 TXNDC2Q86VQ3 553 aa23.16■■□□□ 1.3
LDOC1-202ENST00000460721 STAG3Q9UJ98 1225 aa23.16■■□□□ 1.3
LDOC1-202ENST00000460721 MYO5BQ9ULV0 1848 aa23.16■■□□□ 1.3
LDOC1-202ENST00000460721 IQSEC2Q5JU85 1478 aa23.16■■□□□ 1.3
LDOC1-202ENST00000460721 SPHKAPQ2M3C7 1700 aa23.15■■□□□ 1.3
LDOC1-202ENST00000460721 EID1Q9Y6B2 187 aa23.12■■□□□ 1.29
LDOC1-202ENST00000460721 ZFYVE9O95405 1425 aa23.11■■□□□ 1.29
LDOC1-202ENST00000460721 TRIM52Q96A61 297 aa23.09■■□□□ 1.29
LDOC1-202ENST00000460721 CPS1P31327 1500 aa23.08■■□□□ 1.28
LDOC1-202ENST00000460721 TRPM2O94759 1503 aa23.07■■□□□ 1.28
LDOC1-202ENST00000460721 STRCP1A6NGW2 1772 aa23.06■■□□□ 1.28
LDOC1-202ENST00000460721 SETD5Q9C0A6 1442 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms