RNA–Protein interactions for RNA: ENST00000460610.1

RAF1-206, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 3

Gene RAF1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-206ENST00000460610 EEA1Q15075 1411 aa11.97□□□□□ -0.49
RAF1-206ENST00000460610 HNRNPMP52272 730 aaKnown RBP eCLIP11.97□□□□□ -0.49
RAF1-206ENST00000460610 GGT6Q6P531 493 aa11.97□□□□□ -0.49
RAF1-206ENST00000460610 INO80Q9ULG1 1556 aaPredicted RBP11.96□□□□□ -0.49
RAF1-206ENST00000460610 ATP7AQ04656 1500 aa11.96□□□□□ -0.49
RAF1-206ENST00000460610 SPAG9O60271 1321 aaKnown RBP11.96□□□□□ -0.49
RAF1-206ENST00000460610 A2MP01023 1474 aa11.95□□□□□ -0.5
RAF1-206ENST00000460610 MAPK8IP2Q13387 824 aaPredicted RBP11.95□□□□□ -0.5
RAF1-206ENST00000460610 FBXO31Q5XUX0 539 aaPredicted RBP11.95□□□□□ -0.5
RAF1-206ENST00000460610 ZNF777Q9ULD5 760 aaPredicted RBP11.95□□□□□ -0.5
RAF1-206ENST00000460610 POTEAQ6S8J7 498 aa11.93□□□□□ -0.5
RAF1-206ENST00000460610 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.92□□□□□ -0.5
RAF1-206ENST00000460610 LRRC7Q96NW7 1537 aa11.92□□□□□ -0.5
RAF1-206ENST00000460610 GPATCH8Q9UKJ3 1502 aaKnown RBP11.92□□□□□ -0.5
RAF1-206ENST00000460610 XIRP1Q702N8 1843 aaKnown RBP11.92□□□□□ -0.5
RAF1-206ENST00000460610 SETD1AO15047 1707 aaKnown RBP11.91□□□□□ -0.5
RAF1-206ENST00000460610 ADGBQ8N7X0 1667 aa11.91□□□□□ -0.5
RAF1-206ENST00000460610 MED14O60244 1454 aa11.9□□□□□ -0.5
RAF1-206ENST00000460610 DEPDC5O75140 1603 aa11.9□□□□□ -0.5
RAF1-206ENST00000460610 UBTFP17480 764 aaKnown RBP11.9□□□□□ -0.5
RAF1-206ENST00000460610 TNRQ92752 1358 aa11.9□□□□□ -0.5
RAF1-206ENST00000460610 NPHP4O75161 1426 aaPredicted RBP11.89□□□□□ -0.51
RAF1-206ENST00000460610 IQGAP1P46940 1657 aa11.89□□□□□ -0.51
RAF1-206ENST00000460610 RNF17Q9BXT8 1623 aaKnown RBP11.89□□□□□ -0.51
RAF1-206ENST00000460610 ANKLE2Q86XL3 938 aa11.88□□□□□ -0.51
RAF1-206ENST00000460610 KIAA1107Q9UPP5 1409 aa11.87□□□□□ -0.51
RAF1-206ENST00000460610 CASKIN1Q8WXD9 1431 aa11.86□□□□□ -0.51
RAF1-206ENST00000460610 PZPP20742 1482 aa11.86□□□□□ -0.51
RAF1-206ENST00000460610 CCDC18Q5T9S5 1454 aa11.86□□□□□ -0.51
RAF1-206ENST00000460610 ZC3H13Q5T200 1668 aaKnown RBP11.86□□□□□ -0.51
RAF1-206ENST00000460610 ZNF644Q9H582 1327 aaPredicted RBP11.86□□□□□ -0.51
RAF1-206ENST00000460610 UGGT1Q9NYU2 1555 aa11.85□□□□□ -0.51
RAF1-206ENST00000460610 SYNMO15061 1565 aa11.84□□□□□ -0.51
RAF1-206ENST00000460610 MIA2Q96PC5 1412 aa11.84□□□□□ -0.51
RAF1-206ENST00000460610 CFAP65Q6ZU64 1925 aaKnown RBP11.84□□□□□ -0.51
RAF1-206ENST00000460610 THEMISQ8N1K5 641 aaPredicted RBP11.83□□□□□ -0.52
RAF1-206ENST00000460610 MBD5Q9P267 1494 aa11.83□□□□□ -0.52
RAF1-206ENST00000460610 DHX29Q7Z478 1369 aaKnown RBP11.82□□□□□ -0.52
RAF1-206ENST00000460610 CFDP1Q9UEE9 299 aaPredicted RBP11.82□□□□□ -0.52
RAF1-206ENST00000460610 PLEKHH2Q8IVE3 1493 aa11.82□□□□□ -0.52
RAF1-206ENST00000460610 KDM5DQ9BY66 1539 aa11.81□□□□□ -0.52
RAF1-206ENST00000460610 KIF3BO15066 747 aa11.81□□□□□ -0.52
RAF1-206ENST00000460610 NLRP1Q9C000 1473 aa11.81□□□□□ -0.52
RAF1-206ENST00000460610 FAM135AQ9P2D6 1515 aa11.81□□□□□ -0.52
RAF1-206ENST00000460610 CCNB3Q8WWL7 1395 aa11.78□□□□□ -0.52
RAF1-206ENST00000460610 RTEL1-TNFRSF6BF6WH68 1400 aa11.77□□□□□ -0.52
RAF1-206ENST00000460610 UBR1Q8IWV7 1749 aa11.77□□□□□ -0.52
RAF1-206ENST00000460610 FYCO1Q9BQS8 1478 aa11.77□□□□□ -0.52
RAF1-206ENST00000460610 TIAM1Q13009 1591 aa11.77□□□□□ -0.53
RAF1-206ENST00000460610 WASHC2CQ9Y4E1 1318 aa11.77□□□□□ -0.53
RAF1-206ENST00000460610 ROBO1Q9Y6N7 1651 aa11.77□□□□□ -0.53
RAF1-206ENST00000460610 FAM135BQ49AJ0 1406 aa11.77□□□□□ -0.53
RAF1-206ENST00000460610 LTKP29376 864 aa11.76□□□□□ -0.53
RAF1-206ENST00000460610 UPF1Q92900 1129 aaKnown RBP eCLIP11.75□□□□□ -0.53
RAF1-206ENST00000460610 SRCAPQ6ZRS2 3230 aa11.75□□□□□ -0.53
RAF1-206ENST00000460610 NCOA2Q15596 1464 aa11.74□□□□□ -0.53
RAF1-206ENST00000460610 PPP4R3CPQ6ZMV5 832 aa11.73□□□□□ -0.53
RAF1-206ENST00000460610 ERVK-7P63135 1459 aa11.72□□□□□ -0.53
RAF1-206ENST00000460610 SCAF11Q99590 1463 aaKnown RBP11.72□□□□□ -0.53
RAF1-206ENST00000460610 RBM33Q96EV2 1170 aaKnown RBP11.72□□□□□ -0.53
RAF1-206ENST00000460610 CEP152O94986 1710 aa11.72□□□□□ -0.53
RAF1-206ENST00000460610 ABCC3O15438 1527 aa11.71□□□□□ -0.53
RAF1-206ENST00000460610 MAP3K1Q13233 1512 aa11.71□□□□□ -0.53
RAF1-206ENST00000460610 ARHGAP23Q9P227 1491 aa11.71□□□□□ -0.53
RAF1-206ENST00000460610 PHLPP1O60346 1717 aa11.71□□□□□ -0.54
RAF1-206ENST00000460610 MROH1Q8NDA8 1641 aa11.7□□□□□ -0.54
RAF1-206ENST00000460610 SLIT1O75093 1534 aa11.7□□□□□ -0.54
RAF1-206ENST00000460610 TMEM94Q12767 1356 aa11.69□□□□□ -0.54
RAF1-206ENST00000460610 TXNDC2Q86VQ3 553 aa11.69□□□□□ -0.54
RAF1-206ENST00000460610 CCDC141Q6ZP82 1450 aa11.69□□□□□ -0.54
RAF1-206ENST00000460610 MTUS2Q5JR59 1369 aa11.68□□□□□ -0.54
RAF1-206ENST00000460610 LRP6O75581 1613 aa11.68□□□□□ -0.54
RAF1-206ENST00000460610 PRKCSHP14314 528 aaPredicted RBP11.67□□□□□ -0.54
RAF1-206ENST00000460610 CAMSAP2Q08AD1 1489 aa11.66□□□□□ -0.54
RAF1-206ENST00000460610 TRIM52Q96A61 297 aa11.66□□□□□ -0.54
RAF1-206ENST00000460610 PIK3C2BO00750 1634 aa11.65□□□□□ -0.54
RAF1-206ENST00000460610 COL16A1Q07092 1604 aaPredicted RBP11.65□□□□□ -0.54
RAF1-206ENST00000460610 TET3O43151 1660 aa11.65□□□□□ -0.55
RAF1-206ENST00000460610 JCADQ9P266 1359 aa11.64□□□□□ -0.55
RAF1-206ENST00000460610 CEP162Q5TB80 1403 aa11.63□□□□□ -0.55
RAF1-206ENST00000460610 KCNA6P17658 529 aa11.63□□□□□ -0.55
RAF1-206ENST00000460610 PROSER2Q86WR7 435 aaPredicted RBP11.63□□□□□ -0.55
RAF1-206ENST00000460610 EHBP1L1Q8N3D4 1523 aa11.63□□□□□ -0.55
RAF1-206ENST00000460610 ARHGEF5Q12774 1597 aa11.62□□□□□ -0.55
RAF1-206ENST00000460610 SLC26A8Q96RN1 970 aa11.62□□□□□ -0.55
RAF1-206ENST00000460610 PRDM15P57071 1507 aaPredicted RBP11.61□□□□□ -0.55
RAF1-206ENST00000460610 EIF2AK4Q9P2K8 1649 aaKnown RBP11.61□□□□□ -0.55
RAF1-206ENST00000460610 ZBTB22O15209 634 aa11.61□□□□□ -0.55
RAF1-206ENST00000460610 BCANQ96GW7 911 aa11.61□□□□□ -0.55
RAF1-206ENST00000460610 ARXQ96QS3 562 aa11.61□□□□□ -0.55
RAF1-206ENST00000460610 SLAIN2Q9P270 581 aa11.61□□□□□ -0.55
RAF1-206ENST00000460610 TMEM2Q9UHN6 1383 aa11.61□□□□□ -0.55
RAF1-206ENST00000460610 LRRC9Q6ZRR7 1453 aa11.61□□□□□ -0.55
RAF1-206ENST00000460610 NWD1Q149M9 1564 aa11.6□□□□□ -0.55
RAF1-206ENST00000460610 CHD2O14647 1828 aaKnown RBP11.59□□□□□ -0.55
RAF1-206ENST00000460610 RSPH4AQ5TD94 716 aa11.59□□□□□ -0.55
RAF1-206ENST00000460610 EID1Q9Y6B2 187 aa11.59□□□□□ -0.55
RAF1-206ENST00000460610 SHPRHQ149N8 1683 aa11.59□□□□□ -0.55
RAF1-206ENST00000460610 MAST1Q9Y2H9 1570 aa11.58□□□□□ -0.55
RAF1-206ENST00000460610 KDM5AP29375 1690 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms