RNA–Protein interactions for RNA: ENST00000460480.1

SLC6A1-203, Transcript of solute carrier family 6 member 1, humanhuman

TSL 4

Gene SLC6A1, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-203ENST00000460480 TSPY4P0CV99 314 aa23.36■■□□□ 1.33
SLC6A1-203ENST00000460480 TSPY10P0CW01 314 aa23.36■■□□□ 1.33
SLC6A1-203ENST00000460480 CEP170BQ9Y4F5 1589 aaPredicted RBP23.35■■□□□ 1.33
SLC6A1-203ENST00000460480 MAP3K1Q13233 1512 aa23.35■■□□□ 1.33
SLC6A1-203ENST00000460480 IQSEC2Q5JU85 1478 aa23.33■■□□□ 1.33
SLC6A1-203ENST00000460480 A2ML1A8K2U0 1454 aa23.32■■□□□ 1.32
SLC6A1-203ENST00000460480 ZNF335Q9H4Z2 1342 aaPredicted RBP23.32■■□□□ 1.32
SLC6A1-203ENST00000460480 WASHC2CQ9Y4E1 1318 aa23.32■■□□□ 1.32
SLC6A1-203ENST00000460480 FAM135AQ9P2D6 1515 aa23.3■■□□□ 1.32
SLC6A1-203ENST00000460480 PZPP20742 1482 aa23.3■■□□□ 1.32
SLC6A1-203ENST00000460480 DNMT1P26358 1616 aaKnown RBP23.3■■□□□ 1.32
SLC6A1-203ENST00000460480 KDM5DQ9BY66 1539 aa23.28■■□□□ 1.32
SLC6A1-203ENST00000460480 TNRQ92752 1358 aa23.28■■□□□ 1.32
SLC6A1-203ENST00000460480 MIA2Q96PC5 1412 aa23.27■■□□□ 1.32
SLC6A1-203ENST00000460480 MAST1Q9Y2H9 1570 aa23.26■■□□□ 1.31
SLC6A1-203ENST00000460480 MYOM3Q5VTT5 1437 aa23.25■■□□□ 1.31
SLC6A1-203ENST00000460480 THEMISQ8N1K5 641 aaPredicted RBP23.2■■□□□ 1.3
SLC6A1-203ENST00000460480 RNF17Q9BXT8 1623 aaKnown RBP23.19■■□□□ 1.3
SLC6A1-203ENST00000460480 NLRP1Q9C000 1473 aa23.18■■□□□ 1.3
SLC6A1-203ENST00000460480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.17■■□□□ 1.3
SLC6A1-203ENST00000460480 ANKLE2Q86XL3 938 aa23.17■■□□□ 1.3
SLC6A1-203ENST00000460480 NEURL4Q96JN8 1562 aa23.17■■□□□ 1.3
SLC6A1-203ENST00000460480 ABCC3O15438 1527 aa23.16■■□□□ 1.3
SLC6A1-203ENST00000460480 MROH1Q8NDA8 1641 aa23.15■■□□□ 1.3
SLC6A1-203ENST00000460480 UBAP1LF5GYI3 381 aa23.14■■□□□ 1.29
SLC6A1-203ENST00000460480 ABCC5O15440 1437 aa23.14■■□□□ 1.29
SLC6A1-203ENST00000460480 EIF2AK4Q9P2K8 1649 aaKnown RBP23.13■■□□□ 1.29
SLC6A1-203ENST00000460480 MED14O60244 1454 aa23.12■■□□□ 1.29
SLC6A1-203ENST00000460480 ILDR2Q71H61 639 aa23.12■■□□□ 1.29
SLC6A1-203ENST00000460480 UGGT1Q9NYU2 1555 aa23.12■■□□□ 1.29
SLC6A1-203ENST00000460480 SPATA31D1Q6ZQQ2 1576 aa23.11■■□□□ 1.29
SLC6A1-203ENST00000460480 DUOX2Q9NRD8 1548 aa23.11■■□□□ 1.29
SLC6A1-203ENST00000460480 DISP3Q9P2K9 1392 aa23.11■■□□□ 1.29
SLC6A1-203ENST00000460480 POLR1AO95602 1720 aaPredicted RBP23.1■■□□□ 1.29
SLC6A1-203ENST00000460480 SHANK2Q9UPX8 1470 aa23.1■■□□□ 1.29
SLC6A1-203ENST00000460480 RRP7BPQ9NSQ0 103 aa23.08■■□□□ 1.29
SLC6A1-203ENST00000460480 ERVK-7P63135 1459 aa23.08■■□□□ 1.29
SLC6A1-203ENST00000460480 ZC3H13Q5T200 1668 aaKnown RBP23.08■■□□□ 1.29
SLC6A1-203ENST00000460480 DEPDC5O75140 1603 aa23.08■■□□□ 1.28
SLC6A1-203ENST00000460480 KIF15Q9NS87 1388 aa23.07■■□□□ 1.28
SLC6A1-203ENST00000460480 NPHP4O75161 1426 aaPredicted RBP23.06■■□□□ 1.28
SLC6A1-203ENST00000460480 ARHGAP31Q2M1Z3 1444 aa23.06■■□□□ 1.28
SLC6A1-203ENST00000460480 VWDEQ8N2E2 1590 aa23.06■■□□□ 1.28
SLC6A1-203ENST00000460480 PTPN23Q9H3S7 1636 aa23.05■■□□□ 1.28
SLC6A1-203ENST00000460480 APLP2Q06481 763 aa23.05■■□□□ 1.28
SLC6A1-203ENST00000460480 CPS1P31327 1500 aa23.04■■□□□ 1.28
SLC6A1-203ENST00000460480 FGD6Q6ZV73 1430 aa23.04■■□□□ 1.28
SLC6A1-203ENST00000460480 DAPK1P53355 1430 aa23.03■■□□□ 1.28
SLC6A1-203ENST00000460480 ERBINQ96RT1 1412 aa23.03■■□□□ 1.28
SLC6A1-203ENST00000460480 CFAP65Q6ZU64 1925 aaKnown RBP23■■□□□ 1.27
SLC6A1-203ENST00000460480 CEP152O94986 1710 aa23■■□□□ 1.27
SLC6A1-203ENST00000460480 PRDM15P57071 1507 aaPredicted RBP23■■□□□ 1.27
SLC6A1-203ENST00000460480 CROCC2H7BZ55 1655 aa23■■□□□ 1.27
SLC6A1-203ENST00000460480 TOM1O60784 492 aa22.98■■□□□ 1.27
SLC6A1-203ENST00000460480 LTKP29376 864 aa22.98■■□□□ 1.27
SLC6A1-203ENST00000460480 CHIC2Q9UKJ5 165 aa22.97■■□□□ 1.27
SLC6A1-203ENST00000460480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.96■■□□□ 1.27
SLC6A1-203ENST00000460480 ARHGAP23Q9P227 1491 aa22.96■■□□□ 1.27
SLC6A1-203ENST00000460480 UBR1Q8IWV7 1749 aa22.96■■□□□ 1.27
SLC6A1-203ENST00000460480 IQGAP1P46940 1657 aa22.95■■□□□ 1.26
SLC6A1-203ENST00000460480 ANKRD30AQ9BXX3 1397 aa22.94■■□□□ 1.26
SLC6A1-203ENST00000460480 SOCS7O14512 581 aa22.94■■□□□ 1.26
SLC6A1-203ENST00000460480 ALKQ9UM73 1620 aa22.93■■□□□ 1.26
SLC6A1-203ENST00000460480 SLIT1O75093 1534 aa22.93■■□□□ 1.26
SLC6A1-203ENST00000460480 HSPA1LP34931 641 aa22.93■■□□□ 1.26
SLC6A1-203ENST00000460480 STRCP1A6NGW2 1772 aa22.92■■□□□ 1.26
SLC6A1-203ENST00000460480 PIP4K2BP78356 416 aa22.92■■□□□ 1.26
SLC6A1-203ENST00000460480 TXNDC2Q86VQ3 553 aa22.92■■□□□ 1.26
SLC6A1-203ENST00000460480 LMTK2Q8IWU2 1503 aa22.92■■□□□ 1.26
SLC6A1-203ENST00000460480 SCAF11Q99590 1463 aaKnown RBP22.91■■□□□ 1.26
SLC6A1-203ENST00000460480 IDI1Q13907 227 aa22.9■■□□□ 1.26
SLC6A1-203ENST00000460480 LRRC7Q96NW7 1537 aa22.9■■□□□ 1.26
SLC6A1-203ENST00000460480 KANK1Q14678 1352 aa22.89■■□□□ 1.26
SLC6A1-203ENST00000460480 ADGRL2O95490 1459 aa22.88■■□□□ 1.25
SLC6A1-203ENST00000460480 TMEM2Q9UHN6 1383 aa22.87■■□□□ 1.25
SLC6A1-203ENST00000460480 SCAF1Q9H7N4 1312 aaKnown RBP22.85■■□□□ 1.25
SLC6A1-203ENST00000460480 NOS1P29475 1434 aa22.85■■□□□ 1.25
SLC6A1-203ENST00000460480 EID1Q9Y6B2 187 aa22.85■■□□□ 1.25
SLC6A1-203ENST00000460480 PIK3C2BO00750 1634 aa22.84■■□□□ 1.25
SLC6A1-203ENST00000460480 FAM50AQ14320 339 aaKnown RBP22.81■■□□□ 1.24
SLC6A1-203ENST00000460480 SYNMO15061 1565 aa22.8■■□□□ 1.24
SLC6A1-203ENST00000460480 KDM5AP29375 1690 aaKnown RBP22.8■■□□□ 1.24
SLC6A1-203ENST00000460480 SLC52A1Q9NWF4 448 aa22.79■■□□□ 1.24
SLC6A1-203ENST00000460480 ANKRD50Q9ULJ7 1429 aa22.79■■□□□ 1.24
SLC6A1-203ENST00000460480 EFCAB6Q5THR3 1501 aa22.78■■□□□ 1.24
SLC6A1-203ENST00000460480 STAG3Q9UJ98 1225 aa22.78■■□□□ 1.24
SLC6A1-203ENST00000460480 TET3O43151 1660 aa22.77■■□□□ 1.24
SLC6A1-203ENST00000460480 KCNA6P17658 529 aa22.73■■□□□ 1.23
SLC6A1-203ENST00000460480 SLC26A8Q96RN1 970 aa22.73■■□□□ 1.23
SLC6A1-203ENST00000460480 XIRP1Q702N8 1843 aaKnown RBP22.73■■□□□ 1.23
SLC6A1-203ENST00000460480 RPRD2Q5VT52 1461 aaKnown RBP22.73■■□□□ 1.23
SLC6A1-203ENST00000460480 MED1Q15648 1581 aaPredicted RBP22.72■■□□□ 1.23
SLC6A1-203ENST00000460480 ADGRB3O60242 1522 aa22.69■■□□□ 1.22
SLC6A1-203ENST00000460480 ROCK1Q13464 1354 aa22.68■■□□□ 1.22
SLC6A1-203ENST00000460480 TMEM94Q12767 1356 aa22.67■■□□□ 1.22
SLC6A1-203ENST00000460480 ZFYVE9O95405 1425 aa22.66■■□□□ 1.22
SLC6A1-203ENST00000460480 FAM135BQ49AJ0 1406 aa22.65■■□□□ 1.22
SLC6A1-203ENST00000460480 PROSER2Q86WR7 435 aaPredicted RBP22.64■■□□□ 1.21
SLC6A1-203ENST00000460480 UNC13BO14795 1591 aa22.63■■□□□ 1.21
SLC6A1-203ENST00000460480 RBM33Q96EV2 1170 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms