RNA–Protein interactions for RNA: ENST00000460215.5

SCMH1-212, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-212ENST00000460215 CDC42BPAQ5VT25 1732 aa14.22□□□□□ -0.13
SCMH1-212ENST00000460215 HNRNPMP52272 730 aaKnown RBP eCLIP14.22□□□□□ -0.13
SCMH1-212ENST00000460215 FBXO31Q5XUX0 539 aaPredicted RBP14.22□□□□□ -0.13
SCMH1-212ENST00000460215 THEMISQ8N1K5 641 aaPredicted RBP14.22□□□□□ -0.13
SCMH1-212ENST00000460215 IQGAP1P46940 1657 aa14.22□□□□□ -0.13
SCMH1-212ENST00000460215 STRCP1A6NGW2 1772 aa14.22□□□□□ -0.13
SCMH1-212ENST00000460215 LRRIQ1Q96JM4 1722 aa14.21□□□□□ -0.13
SCMH1-212ENST00000460215 ARHGAP35Q9NRY4 1499 aa14.21□□□□□ -0.13
SCMH1-212ENST00000460215 FAM135AQ9P2D6 1515 aa14.2□□□□□ -0.14
SCMH1-212ENST00000460215 PZPP20742 1482 aa14.19□□□□□ -0.14
SCMH1-212ENST00000460215 UGGT1Q9NYU2 1555 aa14.19□□□□□ -0.14
SCMH1-212ENST00000460215 NLRP1Q9C000 1473 aa14.18□□□□□ -0.14
SCMH1-212ENST00000460215 CCDC18Q5T9S5 1454 aa14.17□□□□□ -0.14
SCMH1-212ENST00000460215 ADGBQ8N7X0 1667 aa14.17□□□□□ -0.14
SCMH1-212ENST00000460215 KIAA1107Q9UPP5 1409 aa14.16□□□□□ -0.14
SCMH1-212ENST00000460215 UPF1Q92900 1129 aaKnown RBP eCLIP14.16□□□□□ -0.14
SCMH1-212ENST00000460215 PLEKHH2Q8IVE3 1493 aa14.16□□□□□ -0.14
SCMH1-212ENST00000460215 FAM135BQ49AJ0 1406 aa14.15□□□□□ -0.14
SCMH1-212ENST00000460215 MIA2Q96PC5 1412 aa14.15□□□□□ -0.14
SCMH1-212ENST00000460215 KDM5DQ9BY66 1539 aa14.15□□□□□ -0.14
SCMH1-212ENST00000460215 CHIC1Q5VXU3 224 aa14.15□□□□□ -0.14
SCMH1-212ENST00000460215 GPATCH8Q9UKJ3 1502 aaKnown RBP14.15□□□□□ -0.14
SCMH1-212ENST00000460215 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
SCMH1-212ENST00000460215 SRCAPQ6ZRS2 3230 aa14.12□□□□□ -0.15
SCMH1-212ENST00000460215 UBTFP17480 764 aaKnown RBP14.12□□□□□ -0.15
SCMH1-212ENST00000460215 CFDP1Q9UEE9 299 aaPredicted RBP14.11□□□□□ -0.15
SCMH1-212ENST00000460215 WASHC2CQ9Y4E1 1318 aa14.11□□□□□ -0.15
SCMH1-212ENST00000460215 CASKIN1Q8WXD9 1431 aa14.1□□□□□ -0.15
SCMH1-212ENST00000460215 KIF3BO15066 747 aa14.1□□□□□ -0.15
SCMH1-212ENST00000460215 ZC3H13Q5T200 1668 aaKnown RBP14.1□□□□□ -0.15
SCMH1-212ENST00000460215 DHX29Q7Z478 1369 aaKnown RBP14.09□□□□□ -0.15
SCMH1-212ENST00000460215 TRIM52Q96A61 297 aa14.08□□□□□ -0.16
SCMH1-212ENST00000460215 XIRP1Q702N8 1843 aaKnown RBP14.08□□□□□ -0.16
SCMH1-212ENST00000460215 ROBO1Q9Y6N7 1651 aa14.07□□□□□ -0.16
SCMH1-212ENST00000460215 CCNB3Q8WWL7 1395 aa14.07□□□□□ -0.16
SCMH1-212ENST00000460215 SCAF11Q99590 1463 aaKnown RBP14.06□□□□□ -0.16
SCMH1-212ENST00000460215 RTEL1-TNFRSF6BF6WH68 1400 aa14.05□□□□□ -0.16
SCMH1-212ENST00000460215 TMEM94Q12767 1356 aa14.04□□□□□ -0.16
SCMH1-212ENST00000460215 JCADQ9P266 1359 aa14.04□□□□□ -0.16
SCMH1-212ENST00000460215 LRRC9Q6ZRR7 1453 aa14.04□□□□□ -0.16
SCMH1-212ENST00000460215 MBD5Q9P267 1494 aa14.02□□□□□ -0.16
SCMH1-212ENST00000460215 ZNF644Q9H582 1327 aaPredicted RBP14.02□□□□□ -0.17
SCMH1-212ENST00000460215 ZNF772Q68DY9 489 aaPredicted RBP14.02□□□□□ -0.17
SCMH1-212ENST00000460215 FYCO1Q9BQS8 1478 aa14.01□□□□□ -0.17
SCMH1-212ENST00000460215 MEX3CQ5U5Q3 659 aaKnown RBP14.01□□□□□ -0.17
SCMH1-212ENST00000460215 ERVK-7P63135 1459 aa14□□□□□ -0.17
SCMH1-212ENST00000460215 LTKP29376 864 aa14□□□□□ -0.17
SCMH1-212ENST00000460215 LRP6O75581 1613 aa14□□□□□ -0.17
SCMH1-212ENST00000460215 MAP3K1Q13233 1512 aa14□□□□□ -0.17
SCMH1-212ENST00000460215 PHLPP1O60346 1717 aa13.99□□□□□ -0.17
SCMH1-212ENST00000460215 TXNDC2Q86VQ3 553 aa13.99□□□□□ -0.17
SCMH1-212ENST00000460215 UBR1Q8IWV7 1749 aa13.98□□□□□ -0.17
SCMH1-212ENST00000460215 NCOA2Q15596 1464 aa13.98□□□□□ -0.17
SCMH1-212ENST00000460215 ARHGAP23Q9P227 1491 aa13.98□□□□□ -0.17
SCMH1-212ENST00000460215 ABCC3O15438 1527 aa13.97□□□□□ -0.17
SCMH1-212ENST00000460215 SLIT1O75093 1534 aa13.97□□□□□ -0.17
SCMH1-212ENST00000460215 RXRBP28702 533 aa13.97□□□□□ -0.17
SCMH1-212ENST00000460215 PROSER2Q86WR7 435 aaPredicted RBP13.96□□□□□ -0.17
SCMH1-212ENST00000460215 RBM33Q96EV2 1170 aaKnown RBP13.96□□□□□ -0.17
SCMH1-212ENST00000460215 EID1Q9Y6B2 187 aa13.96□□□□□ -0.17
SCMH1-212ENST00000460215 SPATA31A6Q5VVP1 1343 aa13.95□□□□□ -0.18
SCMH1-212ENST00000460215 CCDC141Q6ZP82 1450 aa13.95□□□□□ -0.18
SCMH1-212ENST00000460215 CDK12Q9NYV4 1490 aaPredicted RBP13.95□□□□□ -0.18
SCMH1-212ENST00000460215 MSH6P52701 1360 aa13.95□□□□□ -0.18
SCMH1-212ENST00000460215 COL16A1Q07092 1604 aaPredicted RBP13.94□□□□□ -0.18
SCMH1-212ENST00000460215 TIAM1Q13009 1591 aa13.94□□□□□ -0.18
SCMH1-212ENST00000460215 MTUS2Q5JR59 1369 aa13.94□□□□□ -0.18
SCMH1-212ENST00000460215 FGD6Q6ZV73 1430 aa13.93□□□□□ -0.18
SCMH1-212ENST00000460215 KCNA6P17658 529 aa13.93□□□□□ -0.18
SCMH1-212ENST00000460215 SLAIN2Q9P270 581 aa13.93□□□□□ -0.18
SCMH1-212ENST00000460215 PRDM15P57071 1507 aaPredicted RBP13.92□□□□□ -0.18
SCMH1-212ENST00000460215 NKTRP30414 1462 aaKnown RBP13.91□□□□□ -0.18
SCMH1-212ENST00000460215 TMEM2Q9UHN6 1383 aa13.89□□□□□ -0.19
SCMH1-212ENST00000460215 SLC26A8Q96RN1 970 aa13.88□□□□□ -0.19
SCMH1-212ENST00000460215 RGS12O14924 1447 aa13.88□□□□□ -0.19
SCMH1-212ENST00000460215 CAMSAP2Q08AD1 1489 aa13.87□□□□□ -0.19
SCMH1-212ENST00000460215 NWD1Q149M9 1564 aa13.87□□□□□ -0.19
SCMH1-212ENST00000460215 SHPRHQ149N8 1683 aa13.86□□□□□ -0.19
SCMH1-212ENST00000460215 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
SCMH1-212ENST00000460215 AFF2P51816 1311 aa13.86□□□□□ -0.19
SCMH1-212ENST00000460215 NUTM2BA6NNL0 878 aaPredicted RBP13.85□□□□□ -0.19
SCMH1-212ENST00000460215 NUTM2EB1AL46 878 aaPredicted RBP13.85□□□□□ -0.19
SCMH1-212ENST00000460215 RSPH4AQ5TD94 716 aa13.85□□□□□ -0.19
SCMH1-212ENST00000460215 NUTM2DQ5VT03 806 aaPredicted RBP13.85□□□□□ -0.19
SCMH1-212ENST00000460215 NUTM2AQ8IVF1 878 aaPredicted RBP13.85□□□□□ -0.19
SCMH1-212ENST00000460215 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
SCMH1-212ENST00000460215 MROH1Q8NDA8 1641 aa13.85□□□□□ -0.19
SCMH1-212ENST00000460215 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
SCMH1-212ENST00000460215 CEP152O94986 1710 aa13.84□□□□□ -0.19
SCMH1-212ENST00000460215 CFAP65Q6ZU64 1925 aaKnown RBP13.84□□□□□ -0.19
SCMH1-212ENST00000460215 PIK3C2BO00750 1634 aa13.84□□□□□ -0.19
SCMH1-212ENST00000460215 FOXD1Q16676 465 aa13.84□□□□□ -0.19
SCMH1-212ENST00000460215 SETBP1Q9Y6X0 1596 aa13.83□□□□□ -0.19
SCMH1-212ENST00000460215 AHDC1Q5TGY3 1603 aaPredicted RBP13.83□□□□□ -0.2
SCMH1-212ENST00000460215 TET3O43151 1660 aa13.83□□□□□ -0.2
SCMH1-212ENST00000460215 KDM5AP29375 1690 aaKnown RBP13.83□□□□□ -0.2
SCMH1-212ENST00000460215 TSPY4P0CV99 314 aa13.83□□□□□ -0.2
SCMH1-212ENST00000460215 TSPY10P0CW01 314 aa13.83□□□□□ -0.2
SCMH1-212ENST00000460215 EFCAB6Q5THR3 1501 aa13.83□□□□□ -0.2
SCMH1-212ENST00000460215 EIF2AK4Q9P2K8 1649 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms