RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 CCDC141Q6ZP82 1450 aa34.58■■■■□ 3.13
PDE6B-203ENST00000460119 TSPY4P0CV99 314 aa34.56■■■■□ 3.12
PDE6B-203ENST00000460119 TSPY10P0CW01 314 aa34.56■■■■□ 3.12
PDE6B-203ENST00000460119 TNRQ92752 1358 aa34.56■■■■□ 3.12
PDE6B-203ENST00000460119 IQSEC2Q5JU85 1478 aa34.56■■■■□ 3.12
PDE6B-203ENST00000460119 A2ML1A8K2U0 1454 aa34.55■■■■□ 3.12
PDE6B-203ENST00000460119 KANK4Q5T7N3 995 aaPredicted RBP34.52■■■■□ 3.12
PDE6B-203ENST00000460119 ZNF142P52746 1687 aaPredicted RBP34.5■■■■□ 3.11
PDE6B-203ENST00000460119 DNMT1P26358 1616 aaKnown RBP34.46■■■■□ 3.11
PDE6B-203ENST00000460119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.45■■■■□ 3.11
PDE6B-203ENST00000460119 PZPP20742 1482 aa34.44■■■■□ 3.1
PDE6B-203ENST00000460119 MIA2Q96PC5 1412 aa34.42■■■■□ 3.1
PDE6B-203ENST00000460119 SOCS7O14512 581 aa34.42■■■■□ 3.1
PDE6B-203ENST00000460119 ANKLE2Q86XL3 938 aa34.42■■■■□ 3.1
PDE6B-203ENST00000460119 KDM5DQ9BY66 1539 aa34.41■■■■□ 3.1
PDE6B-203ENST00000460119 LRRC9Q6ZRR7 1453 aa34.41■■■■□ 3.1
PDE6B-203ENST00000460119 THEMISQ8N1K5 641 aaPredicted RBP34.41■■■■□ 3.1
PDE6B-203ENST00000460119 VPS8Q8N3P4 1428 aa34.4■■■■□ 3.1
PDE6B-203ENST00000460119 ARHGEF5Q12774 1597 aa34.36■■■■□ 3.09
PDE6B-203ENST00000460119 SCAF1Q9H7N4 1312 aaKnown RBP34.35■■■■□ 3.09
PDE6B-203ENST00000460119 PIP4K2BP78356 416 aa34.35■■■■□ 3.09
PDE6B-203ENST00000460119 SPATA31D1Q6ZQQ2 1576 aa34.33■■■■□ 3.09
PDE6B-203ENST00000460119 NEURL4Q96JN8 1562 aa34.3■■■■□ 3.08
PDE6B-203ENST00000460119 SHANK2Q9UPX8 1470 aa34.29■■■■□ 3.08
PDE6B-203ENST00000460119 HSPA1LP34931 641 aa34.28■■■■□ 3.08
PDE6B-203ENST00000460119 NLRP1Q9C000 1473 aa34.27■■■■□ 3.08
PDE6B-203ENST00000460119 FAM135AQ9P2D6 1515 aa34.26■■■■□ 3.08
PDE6B-203ENST00000460119 TOM1O60784 492 aa34.25■■■■□ 3.07
PDE6B-203ENST00000460119 UGGT1Q9NYU2 1555 aa34.24■■■■□ 3.07
PDE6B-203ENST00000460119 NPHP4O75161 1426 aaPredicted RBP34.24■■■■□ 3.07
PDE6B-203ENST00000460119 MYOM3Q5VTT5 1437 aa34.22■■■■□ 3.07
PDE6B-203ENST00000460119 ABCC3O15438 1527 aa34.22■■■■□ 3.07
PDE6B-203ENST00000460119 RRP7BPQ9NSQ0 103 aa34.21■■■■□ 3.07
PDE6B-203ENST00000460119 CPS1P31327 1500 aa34.18■■■■□ 3.06
PDE6B-203ENST00000460119 MAST1Q9Y2H9 1570 aa34.17■■■■□ 3.06
PDE6B-203ENST00000460119 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.16■■■■□ 3.06
PDE6B-203ENST00000460119 VWDEQ8N2E2 1590 aa34.15■■■■□ 3.06
PDE6B-203ENST00000460119 MAP3K1Q13233 1512 aa34.15■■■■□ 3.06
PDE6B-203ENST00000460119 MED14O60244 1454 aa34.15■■■■□ 3.06
PDE6B-203ENST00000460119 ERVK-7P63135 1459 aa34.15■■■■□ 3.06
PDE6B-203ENST00000460119 POLR1AO95602 1720 aaPredicted RBP34.13■■■■□ 3.05
PDE6B-203ENST00000460119 RNF17Q9BXT8 1623 aaKnown RBP34.13■■■■□ 3.05
PDE6B-203ENST00000460119 SENP3Q9H4L4 574 aaPredicted RBP34.12■■■■□ 3.05
PDE6B-203ENST00000460119 ABCC5O15440 1437 aa34.11■■■■□ 3.05
PDE6B-203ENST00000460119 KIF15Q9NS87 1388 aa34.1■■■■□ 3.05
PDE6B-203ENST00000460119 MROH1Q8NDA8 1641 aa34.09■■■■□ 3.05
PDE6B-203ENST00000460119 LTKP29376 864 aa34.09■■■■□ 3.05
PDE6B-203ENST00000460119 APLP2Q06481 763 aa34.09■■■■□ 3.05
PDE6B-203ENST00000460119 TXNDC2Q86VQ3 553 aa34.07■■■■□ 3.04
PDE6B-203ENST00000460119 CHIC2Q9UKJ5 165 aa34.07■■■■□ 3.04
PDE6B-203ENST00000460119 DUOX2Q9NRD8 1548 aa34.06■■■■□ 3.04
PDE6B-203ENST00000460119 DEPDC5O75140 1603 aa34.04■■■■□ 3.04
PDE6B-203ENST00000460119 EIF2AK4Q9P2K8 1649 aaKnown RBP34.01■■■■□ 3.04
PDE6B-203ENST00000460119 LRRC7Q96NW7 1537 aa33.99■■■■□ 3.03
PDE6B-203ENST00000460119 ALKQ9UM73 1620 aa33.98■■■■□ 3.03
PDE6B-203ENST00000460119 ZC3H13Q5T200 1668 aaKnown RBP33.98■■■■□ 3.03
PDE6B-203ENST00000460119 IQGAP1P46940 1657 aa33.96■■■■□ 3.03
PDE6B-203ENST00000460119 CEP152O94986 1710 aa33.96■■■■□ 3.03
PDE6B-203ENST00000460119 DAPK1P53355 1430 aa33.96■■■■□ 3.03
PDE6B-203ENST00000460119 ARHGAP31Q2M1Z3 1444 aa33.95■■■■□ 3.02
PDE6B-203ENST00000460119 SCAF11Q99590 1463 aaKnown RBP33.95■■■■□ 3.02
PDE6B-203ENST00000460119 CFAP65Q6ZU64 1925 aaKnown RBP33.94■■■■□ 3.02
PDE6B-203ENST00000460119 ERBINQ96RT1 1412 aa33.94■■■■□ 3.02
PDE6B-203ENST00000460119 STAG3Q9UJ98 1225 aa33.93■■■■□ 3.02
PDE6B-203ENST00000460119 EID1Q9Y6B2 187 aa33.93■■■■□ 3.02
PDE6B-203ENST00000460119 IDI1Q13907 227 aa33.92■■■■□ 3.02
PDE6B-203ENST00000460119 PTPN23Q9H3S7 1636 aa33.92■■■■□ 3.02
PDE6B-203ENST00000460119 STRCP1A6NGW2 1772 aa33.9■■■■□ 3.02
PDE6B-203ENST00000460119 FGD6Q6ZV73 1430 aa33.9■■■■□ 3.02
PDE6B-203ENST00000460119 ARHGAP23Q9P227 1491 aa33.89■■■■□ 3.02
PDE6B-203ENST00000460119 KANK1Q14678 1352 aa33.89■■■■□ 3.02
PDE6B-203ENST00000460119 MED1Q15648 1581 aaPredicted RBP33.89■■■■□ 3.02
PDE6B-203ENST00000460119 UBR1Q8IWV7 1749 aa33.87■■■■□ 3.01
PDE6B-203ENST00000460119 ANKRD30AQ9BXX3 1397 aa33.86■■■■□ 3.01
PDE6B-203ENST00000460119 PRDM15P57071 1507 aaPredicted RBP33.86■■■■□ 3.01
PDE6B-203ENST00000460119 TMEM2Q9UHN6 1383 aa33.85■■■■□ 3.01
PDE6B-203ENST00000460119 SLIT1O75093 1534 aa33.84■■■■□ 3.01
PDE6B-203ENST00000460119 PHF23Q9BUL5 403 aaPredicted RBP33.83■■■■□ 3.01
PDE6B-203ENST00000460119 FAM50AQ14320 339 aaKnown RBP33.81■■■■□ 3
PDE6B-203ENST00000460119 SLC26A8Q96RN1 970 aa33.81■■■■□ 3
PDE6B-203ENST00000460119 RBM33Q96EV2 1170 aaKnown RBP33.8■■■■□ 3
PDE6B-203ENST00000460119 CROCC2H7BZ55 1655 aa33.77■■■■□ 3
PDE6B-203ENST00000460119 PIK3C2BO00750 1634 aa33.75■■■□□ 2.99
PDE6B-203ENST00000460119 KCNA6P17658 529 aa33.73■■■□□ 2.99
PDE6B-203ENST00000460119 LMTK2Q8IWU2 1503 aa33.71■■■□□ 2.99
PDE6B-203ENST00000460119 PROSER2Q86WR7 435 aaPredicted RBP33.71■■■□□ 2.99
PDE6B-203ENST00000460119 SYNMO15061 1565 aa33.7■■■□□ 2.99
PDE6B-203ENST00000460119 BCANQ96GW7 911 aa33.7■■■□□ 2.99
PDE6B-203ENST00000460119 TMEM94Q12767 1356 aa33.7■■■□□ 2.98
PDE6B-203ENST00000460119 NOS1P29475 1434 aa33.69■■■□□ 2.98
PDE6B-203ENST00000460119 EFCAB6Q5THR3 1501 aa33.69■■■□□ 2.98
PDE6B-203ENST00000460119 SLC52A1Q9NWF4 448 aa33.66■■■□□ 2.98
PDE6B-203ENST00000460119 RGS17Q9UGC6 210 aaPredicted RBP33.63■■■□□ 2.97
PDE6B-203ENST00000460119 ANKRD50Q9ULJ7 1429 aa33.62■■■□□ 2.97
PDE6B-203ENST00000460119 ADGRL2O95490 1459 aa33.61■■■□□ 2.97
PDE6B-203ENST00000460119 TET3O43151 1660 aa33.58■■■□□ 2.97
PDE6B-203ENST00000460119 FAM135BQ49AJ0 1406 aa33.58■■■□□ 2.97
PDE6B-203ENST00000460119 XIRP1Q702N8 1843 aaKnown RBP33.56■■■□□ 2.96
PDE6B-203ENST00000460119 CHGAP10645 457 aaKnown RBP33.55■■■□□ 2.96
PDE6B-203ENST00000460119 NUTM2DQ5VT03 806 aaPredicted RBP33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms