RNA–Protein interactions for RNA: ENST00000459799.1

SCNM1-203, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-203ENST00000459799 IQGAP1P46940 1657 aa15.15■□□□□ 0.02
SCNM1-203ENST00000459799 SPAG9O60271 1321 aaKnown RBP15.14■□□□□ 0.01
SCNM1-203ENST00000459799 MED14O60244 1454 aa15.14■□□□□ 0.01
SCNM1-203ENST00000459799 CCDC18Q5T9S5 1454 aa15.14■□□□□ 0.01
SCNM1-203ENST00000459799 SETD1AO15047 1707 aaKnown RBP15.13■□□□□ 0.01
SCNM1-203ENST00000459799 LRRC7Q96NW7 1537 aa15.12■□□□□ 0.01
SCNM1-203ENST00000459799 NPHP4O75161 1426 aaPredicted RBP15.1■□□□□ 0.01
SCNM1-203ENST00000459799 PZPP20742 1482 aa15.1■□□□□ 0.01
SCNM1-203ENST00000459799 GGT6Q6P531 493 aa15.1■□□□□ 0.01
SCNM1-203ENST00000459799 GPATCH8Q9UKJ3 1502 aaKnown RBP15.1■□□□□ 0.01
SCNM1-203ENST00000459799 TNRQ92752 1358 aa15.1■□□□□ 0.01
SCNM1-203ENST00000459799 XIRP1Q702N8 1843 aaKnown RBP15.09■□□□□ 0.01
SCNM1-203ENST00000459799 ZC3H13Q5T200 1668 aaKnown RBP15.09■□□□□ 0.01
SCNM1-203ENST00000459799 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCNM1-203ENST00000459799 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
SCNM1-203ENST00000459799 KDM5DQ9BY66 1539 aa15.08■□□□□ 0.01
SCNM1-203ENST00000459799 FAM135AQ9P2D6 1515 aa15.07■□□□□ 0
SCNM1-203ENST00000459799 UGGT1Q9NYU2 1555 aa15.07■□□□□ 0
SCNM1-203ENST00000459799 CASKIN1Q8WXD9 1431 aa15.07■□□□□ 0
SCNM1-203ENST00000459799 PLEKHH2Q8IVE3 1493 aa15.07■□□□□ 0
SCNM1-203ENST00000459799 HNRNPMP52272 730 aaKnown RBP eCLIP15.06■□□□□ 0
SCNM1-203ENST00000459799 ZNF777Q9ULD5 760 aaPredicted RBP15.06■□□□□ 0
SCNM1-203ENST00000459799 NLRP1Q9C000 1473 aa15.06■□□□□ 0
SCNM1-203ENST00000459799 FBXO31Q5XUX0 539 aaPredicted RBP15.04■□□□□ -0
SCNM1-203ENST00000459799 ANKLE2Q86XL3 938 aa15.04■□□□□ -0
SCNM1-203ENST00000459799 POTEAQ6S8J7 498 aa15.03■□□□□ -0
SCNM1-203ENST00000459799 FYCO1Q9BQS8 1478 aa15.01□□□□□ -0.01
SCNM1-203ENST00000459799 MIA2Q96PC5 1412 aa15□□□□□ -0.01
SCNM1-203ENST00000459799 UBTFP17480 764 aaKnown RBP14.99□□□□□ -0.01
SCNM1-203ENST00000459799 MBD5Q9P267 1494 aa14.98□□□□□ -0.01
SCNM1-203ENST00000459799 THEMISQ8N1K5 641 aaPredicted RBP14.98□□□□□ -0.01
SCNM1-203ENST00000459799 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
SCNM1-203ENST00000459799 SRCAPQ6ZRS2 3230 aa14.98□□□□□ -0.01
SCNM1-203ENST00000459799 RTEL1-TNFRSF6BF6WH68 1400 aa14.97□□□□□ -0.01
SCNM1-203ENST00000459799 TIAM1Q13009 1591 aa14.97□□□□□ -0.01
SCNM1-203ENST00000459799 UBR1Q8IWV7 1749 aa14.97□□□□□ -0.01
SCNM1-203ENST00000459799 DHX29Q7Z478 1369 aaKnown RBP14.97□□□□□ -0.01
SCNM1-203ENST00000459799 ROBO1Q9Y6N7 1651 aa14.96□□□□□ -0.01
SCNM1-203ENST00000459799 CFDP1Q9UEE9 299 aaPredicted RBP14.95□□□□□ -0.02
SCNM1-203ENST00000459799 FAM135BQ49AJ0 1406 aa14.94□□□□□ -0.02
SCNM1-203ENST00000459799 CCNB3Q8WWL7 1395 aa14.94□□□□□ -0.02
SCNM1-203ENST00000459799 SCAF11Q99590 1463 aaKnown RBP14.91□□□□□ -0.02
SCNM1-203ENST00000459799 ZNF644Q9H582 1327 aaPredicted RBP14.91□□□□□ -0.02
SCNM1-203ENST00000459799 KIF3BO15066 747 aa14.9□□□□□ -0.02
SCNM1-203ENST00000459799 ABCC3O15438 1527 aa14.9□□□□□ -0.02
SCNM1-203ENST00000459799 MAP3K1Q13233 1512 aa14.9□□□□□ -0.02
SCNM1-203ENST00000459799 WASHC2CQ9Y4E1 1318 aa14.9□□□□□ -0.02
SCNM1-203ENST00000459799 ERVK-7P63135 1459 aa14.89□□□□□ -0.03
SCNM1-203ENST00000459799 NCOA2Q15596 1464 aa14.89□□□□□ -0.03
SCNM1-203ENST00000459799 CCDC141Q6ZP82 1450 aa14.89□□□□□ -0.03
SCNM1-203ENST00000459799 ARHGAP23Q9P227 1491 aa14.89□□□□□ -0.03
SCNM1-203ENST00000459799 SLIT1O75093 1534 aa14.88□□□□□ -0.03
SCNM1-203ENST00000459799 PHLPP1O60346 1717 aa14.87□□□□□ -0.03
SCNM1-203ENST00000459799 MROH1Q8NDA8 1641 aa14.87□□□□□ -0.03
SCNM1-203ENST00000459799 CEP152O94986 1710 aa14.86□□□□□ -0.03
SCNM1-203ENST00000459799 LRRC9Q6ZRR7 1453 aa14.85□□□□□ -0.03
SCNM1-203ENST00000459799 EHBP1L1Q8N3D4 1523 aa14.84□□□□□ -0.03
SCNM1-203ENST00000459799 UPF1Q92900 1129 aaKnown RBP eCLIP14.84□□□□□ -0.03
SCNM1-203ENST00000459799 CAMSAP2Q08AD1 1489 aa14.83□□□□□ -0.03
SCNM1-203ENST00000459799 CFAP65Q6ZU64 1925 aaKnown RBP14.83□□□□□ -0.04
SCNM1-203ENST00000459799 COL16A1Q07092 1604 aaPredicted RBP14.83□□□□□ -0.04
SCNM1-203ENST00000459799 EIF2AK4Q9P2K8 1649 aaKnown RBP14.83□□□□□ -0.04
SCNM1-203ENST00000459799 TMEM94Q12767 1356 aa14.83□□□□□ -0.04
SCNM1-203ENST00000459799 MTUS2Q5JR59 1369 aa14.83□□□□□ -0.04
SCNM1-203ENST00000459799 LRP6O75581 1613 aa14.82□□□□□ -0.04
SCNM1-203ENST00000459799 LTKP29376 864 aa14.82□□□□□ -0.04
SCNM1-203ENST00000459799 ARHGEF5Q12774 1597 aa14.81□□□□□ -0.04
SCNM1-203ENST00000459799 NWD1Q149M9 1564 aa14.81□□□□□ -0.04
SCNM1-203ENST00000459799 PIK3C2BO00750 1634 aa14.8□□□□□ -0.04
SCNM1-203ENST00000459799 CEP162Q5TB80 1403 aa14.79□□□□□ -0.04
SCNM1-203ENST00000459799 PRDM15P57071 1507 aaPredicted RBP14.78□□□□□ -0.04
SCNM1-203ENST00000459799 JCADQ9P266 1359 aa14.78□□□□□ -0.04
SCNM1-203ENST00000459799 KDM5AP29375 1690 aaKnown RBP14.77□□□□□ -0.04
SCNM1-203ENST00000459799 NKTRP30414 1462 aaKnown RBP14.77□□□□□ -0.04
SCNM1-203ENST00000459799 MAPK8IP2Q13387 824 aaPredicted RBP14.77□□□□□ -0.05
SCNM1-203ENST00000459799 MAST1Q9Y2H9 1570 aa14.77□□□□□ -0.05
SCNM1-203ENST00000459799 TET3O43151 1660 aa14.76□□□□□ -0.05
SCNM1-203ENST00000459799 SHPRHQ149N8 1683 aa14.76□□□□□ -0.05
SCNM1-203ENST00000459799 TXNDC2Q86VQ3 553 aa14.75□□□□□ -0.05
SCNM1-203ENST00000459799 TRIM52Q96A61 297 aa14.73□□□□□ -0.05
SCNM1-203ENST00000459799 CDK12Q9NYV4 1490 aaPredicted RBP14.73□□□□□ -0.05
SCNM1-203ENST00000459799 TMEM2Q9UHN6 1383 aa14.73□□□□□ -0.05
SCNM1-203ENST00000459799 RBM33Q96EV2 1170 aaKnown RBP14.72□□□□□ -0.05
SCNM1-203ENST00000459799 FGD6Q6ZV73 1430 aa14.72□□□□□ -0.05
SCNM1-203ENST00000459799 ARHGAP31Q2M1Z3 1444 aa14.71□□□□□ -0.05
SCNM1-203ENST00000459799 EFCAB6Q5THR3 1501 aa14.71□□□□□ -0.06
SCNM1-203ENST00000459799 AHDC1Q5TGY3 1603 aaPredicted RBP14.7□□□□□ -0.06
SCNM1-203ENST00000459799 KCNA6P17658 529 aa14.7□□□□□ -0.06
SCNM1-203ENST00000459799 MSH6P52701 1360 aa14.7□□□□□ -0.06
SCNM1-203ENST00000459799 SPATA31A6Q5VVP1 1343 aa14.69□□□□□ -0.06
SCNM1-203ENST00000459799 RSPH4AQ5TD94 716 aa14.69□□□□□ -0.06
SCNM1-203ENST00000459799 ZNF772Q68DY9 489 aaPredicted RBP14.69□□□□□ -0.06
SCNM1-203ENST00000459799 EID1Q9Y6B2 187 aa14.69□□□□□ -0.06
SCNM1-203ENST00000459799 CHD2O14647 1828 aaKnown RBP14.68□□□□□ -0.06
SCNM1-203ENST00000459799 DIP2AQ14689 1571 aa14.68□□□□□ -0.06
SCNM1-203ENST00000459799 PROSER2Q86WR7 435 aaPredicted RBP14.67□□□□□ -0.06
SCNM1-203ENST00000459799 SLAIN2Q9P270 581 aa14.67□□□□□ -0.06
SCNM1-203ENST00000459799 MEX3CQ5U5Q3 659 aaKnown RBP14.65□□□□□ -0.06
SCNM1-203ENST00000459799 SLC26A8Q96RN1 970 aa14.65□□□□□ -0.06
SCNM1-203ENST00000459799 ADGRB3O60242 1522 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms