RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 ANKRD50Q9ULJ7 1429 aa13.14□□□□□ -0.31
CDC42EP3-204ENST00000457889 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
CDC42EP3-204ENST00000457889 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
CDC42EP3-204ENST00000457889 ZFYVE16Q7Z3T8 1539 aa13.13□□□□□ -0.31
CDC42EP3-204ENST00000457889 DUOX2Q9NRD8 1548 aa13.13□□□□□ -0.31
CDC42EP3-204ENST00000457889 POGZQ7Z3K3 1410 aa13.13□□□□□ -0.31
CDC42EP3-204ENST00000457889 TRAPPC8Q9Y2L5 1435 aa13.13□□□□□ -0.31
CDC42EP3-204ENST00000457889 INO80Q9ULG1 1556 aaPredicted RBP13.12□□□□□ -0.31
CDC42EP3-204ENST00000457889 ERBINQ96RT1 1412 aa13.12□□□□□ -0.31
CDC42EP3-204ENST00000457889 SPAG9O60271 1321 aaKnown RBP13.12□□□□□ -0.31
CDC42EP3-204ENST00000457889 KDM5CP41229 1560 aa13.11□□□□□ -0.31
CDC42EP3-204ENST00000457889 FAM69CQ0P6D2 419 aa13.11□□□□□ -0.31
CDC42EP3-204ENST00000457889 ATP7AQ04656 1500 aa13.1□□□□□ -0.31
CDC42EP3-204ENST00000457889 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
CDC42EP3-204ENST00000457889 DENND4BO75064 1496 aaPredicted RBP13.1□□□□□ -0.31
CDC42EP3-204ENST00000457889 CHRDL2Q6WN34 429 aa13.09□□□□□ -0.31
CDC42EP3-204ENST00000457889 MLH3Q9UHC1 1453 aa13.09□□□□□ -0.31
CDC42EP3-204ENST00000457889 KDM5DQ9BY66 1539 aa13.08□□□□□ -0.31
CDC42EP3-204ENST00000457889 KDM6BO15054 1643 aa13.07□□□□□ -0.32
CDC42EP3-204ENST00000457889 HECW2Q9P2P5 1572 aa13.07□□□□□ -0.32
CDC42EP3-204ENST00000457889 KIF13AQ9H1H9 1805 aa13.06□□□□□ -0.32
CDC42EP3-204ENST00000457889 AFAP1Q8N556 730 aa13.05□□□□□ -0.32
CDC42EP3-204ENST00000457889 UNC13BO14795 1591 aa13.05□□□□□ -0.32
CDC42EP3-204ENST00000457889 EIF2AK4Q9P2K8 1649 aaKnown RBP13.05□□□□□ -0.32
CDC42EP3-204ENST00000457889 PPRC1Q5VV67 1664 aaKnown RBP13.05□□□□□ -0.32
CDC42EP3-204ENST00000457889 MAGI2Q86UL8 1455 aa13.04□□□□□ -0.32
CDC42EP3-204ENST00000457889 ZMYM4Q5VZL5 1548 aa13.04□□□□□ -0.32
CDC42EP3-204ENST00000457889 RICTORQ6R327 1708 aa13.03□□□□□ -0.32
CDC42EP3-204ENST00000457889 KIDINS220Q9ULH0 1771 aa13.03□□□□□ -0.32
CDC42EP3-204ENST00000457889 ZBTB22O15209 634 aa13.03□□□□□ -0.32
CDC42EP3-204ENST00000457889 TRIM52Q96A61 297 aa13.03□□□□□ -0.32
CDC42EP3-204ENST00000457889 TIMELESSQ9UNS1 1208 aa13.03□□□□□ -0.32
CDC42EP3-204ENST00000457889 MPHOSPH9Q99550 1183 aa13.01□□□□□ -0.33
CDC42EP3-204ENST00000457889 DHX29Q7Z478 1369 aaKnown RBP13.01□□□□□ -0.33
CDC42EP3-204ENST00000457889 PZPP20742 1482 aa13.01□□□□□ -0.33
CDC42EP3-204ENST00000457889 BCORL1Q5H9F3 1711 aa12.99□□□□□ -0.33
CDC42EP3-204ENST00000457889 DEPDC5O75140 1603 aa12.99□□□□□ -0.33
CDC42EP3-204ENST00000457889 A2MP01023 1474 aa12.99□□□□□ -0.33
CDC42EP3-204ENST00000457889 NUP155O75694 1391 aa12.99□□□□□ -0.33
CDC42EP3-204ENST00000457889 IQGAP3Q86VI3 1631 aa12.99□□□□□ -0.33
CDC42EP3-204ENST00000457889 FRMPD1Q5SYB0 1578 aa12.98□□□□□ -0.33
CDC42EP3-204ENST00000457889 FAM135AQ9P2D6 1515 aa12.98□□□□□ -0.33
CDC42EP3-204ENST00000457889 TSPOAP1O95153 1857 aa12.97□□□□□ -0.33
CDC42EP3-204ENST00000457889 PRDM15P57071 1507 aaPredicted RBP12.97□□□□□ -0.33
CDC42EP3-204ENST00000457889 ABCA6Q8N139 1617 aa12.96□□□□□ -0.33
CDC42EP3-204ENST00000457889 REREQ9P2R6 1566 aa12.96□□□□□ -0.33
CDC42EP3-204ENST00000457889 DIP2CQ9Y2E4 1556 aa12.96□□□□□ -0.33
CDC42EP3-204ENST00000457889 MYT1LQ9UL68 1186 aa12.96□□□□□ -0.33
CDC42EP3-204ENST00000457889 KANK1Q14678 1352 aa12.95□□□□□ -0.34
CDC42EP3-204ENST00000457889 RNF17Q9BXT8 1623 aaKnown RBP12.95□□□□□ -0.34
CDC42EP3-204ENST00000457889 ANKRD30BQ9BXX2 1392 aa12.94□□□□□ -0.34
CDC42EP3-204ENST00000457889 VWDEQ8N2E2 1590 aa12.94□□□□□ -0.34
CDC42EP3-204ENST00000457889 RAPGEF3O95398 923 aa12.94□□□□□ -0.34
CDC42EP3-204ENST00000457889 LMTK2Q8IWU2 1503 aa12.92□□□□□ -0.34
CDC42EP3-204ENST00000457889 ATP10AO60312 1499 aa12.91□□□□□ -0.34
CDC42EP3-204ENST00000457889 PKD2Q13563 968 aa12.91□□□□□ -0.34
CDC42EP3-204ENST00000457889 AGLP35573 1532 aa12.91□□□□□ -0.34
CDC42EP3-204ENST00000457889 ARHGEF40Q8TER5 1519 aa12.91□□□□□ -0.34
CDC42EP3-204ENST00000457889 RPRD2Q5VT52 1461 aaKnown RBP12.91□□□□□ -0.34
CDC42EP3-204ENST00000457889 TET3O43151 1660 aa12.9□□□□□ -0.34
CDC42EP3-204ENST00000457889 AKT1S1Q96B36 256 aa12.9□□□□□ -0.34
CDC42EP3-204ENST00000457889 MROH1Q8NDA8 1641 aa12.9□□□□□ -0.34
CDC42EP3-204ENST00000457889 KIF3BO15066 747 aa12.89□□□□□ -0.35
CDC42EP3-204ENST00000457889 TONSLQ96HA7 1378 aa12.89□□□□□ -0.35
CDC42EP3-204ENST00000457889 YEATS2Q9ULM3 1422 aa12.88□□□□□ -0.35
CDC42EP3-204ENST00000457889 ZC3H13Q5T200 1668 aaKnown RBP12.87□□□□□ -0.35
CDC42EP3-204ENST00000457889 COL17A1Q9UMD9 1497 aaPredicted RBP12.86□□□□□ -0.35
CDC42EP3-204ENST00000457889 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
CDC42EP3-204ENST00000457889 ZBTB12Q9Y330 459 aaPredicted RBP12.86□□□□□ -0.35
CDC42EP3-204ENST00000457889 EFCAB6Q5THR3 1501 aa12.86□□□□□ -0.35
CDC42EP3-204ENST00000457889 SIN3AQ96ST3 1273 aa12.85□□□□□ -0.35
CDC42EP3-204ENST00000457889 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
CDC42EP3-204ENST00000457889 CCDC144AA2RUR9 1427 aa12.84□□□□□ -0.35
CDC42EP3-204ENST00000457889 PTPRTO14522 1441 aa12.83□□□□□ -0.36
CDC42EP3-204ENST00000457889 ABCC3O15438 1527 aa12.83□□□□□ -0.36
CDC42EP3-204ENST00000457889 TRPM2O94759 1503 aa12.83□□□□□ -0.36
CDC42EP3-204ENST00000457889 ARHGAP31Q2M1Z3 1444 aa12.82□□□□□ -0.36
CDC42EP3-204ENST00000457889 E9PCH4 1651 aa12.82□□□□□ -0.36
CDC42EP3-204ENST00000457889 NEURL4Q96JN8 1562 aa12.81□□□□□ -0.36
CDC42EP3-204ENST00000457889 PLA2R1Q13018 1463 aa12.8□□□□□ -0.36
CDC42EP3-204ENST00000457889 PPP1R15AO75807 674 aaPredicted RBP12.8□□□□□ -0.36
CDC42EP3-204ENST00000457889 SPHKAPQ2M3C7 1700 aa12.79□□□□□ -0.36
CDC42EP3-204ENST00000457889 WASHC2CQ9Y4E1 1318 aa12.79□□□□□ -0.36
CDC42EP3-204ENST00000457889 CNTLNQ9NXG0 1405 aa12.79□□□□□ -0.36
CDC42EP3-204ENST00000457889 CAMSAP1Q5T5Y3 1602 aa12.78□□□□□ -0.36
CDC42EP3-204ENST00000457889 GGT6Q6P531 493 aa12.78□□□□□ -0.36
CDC42EP3-204ENST00000457889 PIP4P2Q8N4L2 257 aa12.78□□□□□ -0.36
CDC42EP3-204ENST00000457889 CEP152O94986 1710 aa12.78□□□□□ -0.36
CDC42EP3-204ENST00000457889 STAC3Q96MF2 364 aa12.77□□□□□ -0.37
CDC42EP3-204ENST00000457889 NPATQ14207 1427 aa12.77□□□□□ -0.37
CDC42EP3-204ENST00000457889 L3MBTL2Q969R5 705 aa12.75□□□□□ -0.37
CDC42EP3-204ENST00000457889 PITPNM1O00562 1244 aa12.74□□□□□ -0.37
CDC42EP3-204ENST00000457889 NOS1P29475 1434 aa12.73□□□□□ -0.37
CDC42EP3-204ENST00000457889 UHRF1BP1Q6BDS2 1440 aa12.73□□□□□ -0.37
CDC42EP3-204ENST00000457889 SPATA31E1Q6ZUB1 1445 aa12.72□□□□□ -0.37
CDC42EP3-204ENST00000457889 CLTCL1P53675 1640 aa12.71□□□□□ -0.37
CDC42EP3-204ENST00000457889 SIGLEC1Q9BZZ2 1709 aa12.7□□□□□ -0.38
CDC42EP3-204ENST00000457889 ZNF316A6NFI3 1004 aaPredicted RBP12.69□□□□□ -0.38
CDC42EP3-204ENST00000457889 SLC52A1Q9NWF4 448 aa12.69□□□□□ -0.38
CDC42EP3-204ENST00000457889 MROH2AA6NES4 1674 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms