RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 COL17A1Q9UMD9 1497 aaPredicted RBP13.01□□□□□ -0.33
RIF1-208ENST00000457745 ABCA6Q8N139 1617 aa13.01□□□□□ -0.33
RIF1-208ENST00000457745 ANKRD50Q9ULJ7 1429 aa13□□□□□ -0.33
RIF1-208ENST00000457745 RAPGEF3O95398 923 aa12.98□□□□□ -0.33
RIF1-208ENST00000457745 UNC13BO14795 1591 aa12.98□□□□□ -0.33
RIF1-208ENST00000457745 SIGLEC1Q9BZZ2 1709 aa12.97□□□□□ -0.33
RIF1-208ENST00000457745 TSPY4P0CV99 314 aa12.97□□□□□ -0.33
RIF1-208ENST00000457745 TSPY10P0CW01 314 aa12.97□□□□□ -0.33
RIF1-208ENST00000457745 HECW2Q9P2P5 1572 aa12.97□□□□□ -0.33
RIF1-208ENST00000457745 MROH1Q8NDA8 1641 aa12.96□□□□□ -0.33
RIF1-208ENST00000457745 SPAG9O60271 1321 aaKnown RBP12.96□□□□□ -0.33
RIF1-208ENST00000457745 DIP2CQ9Y2E4 1556 aa12.96□□□□□ -0.33
RIF1-208ENST00000457745 KDM5DQ9BY66 1539 aa12.96□□□□□ -0.33
RIF1-208ENST00000457745 DUOX2Q9NRD8 1548 aa12.96□□□□□ -0.33
RIF1-208ENST00000457745 ZNF518AQ6AHZ1 1483 aa12.96□□□□□ -0.34
RIF1-208ENST00000457745 RTEL1-TNFRSF6BF6WH68 1400 aa12.96□□□□□ -0.34
RIF1-208ENST00000457745 YEATS2Q9ULM3 1422 aa12.96□□□□□ -0.34
RIF1-208ENST00000457745 ZBTB22O15209 634 aa12.95□□□□□ -0.34
RIF1-208ENST00000457745 RSPH4AQ5TD94 716 aa12.95□□□□□ -0.34
RIF1-208ENST00000457745 SIN3AQ96ST3 1273 aa12.95□□□□□ -0.34
RIF1-208ENST00000457745 MAGI2Q86UL8 1455 aa12.94□□□□□ -0.34
RIF1-208ENST00000457745 MYCNP04198 464 aaPredicted RBP12.94□□□□□ -0.34
RIF1-208ENST00000457745 MLH3Q9UHC1 1453 aa12.93□□□□□ -0.34
RIF1-208ENST00000457745 TRIM52Q96A61 297 aa12.93□□□□□ -0.34
RIF1-208ENST00000457745 DEPDC5O75140 1603 aa12.92□□□□□ -0.34
RIF1-208ENST00000457745 MPHOSPH9Q99550 1183 aa12.92□□□□□ -0.34
RIF1-208ENST00000457745 ZMYM4Q5VZL5 1548 aa12.92□□□□□ -0.34
RIF1-208ENST00000457745 ERBINQ96RT1 1412 aa12.91□□□□□ -0.34
RIF1-208ENST00000457745 CAPN15O75808 1086 aa12.91□□□□□ -0.34
RIF1-208ENST00000457745 IQGAP3Q86VI3 1631 aa12.91□□□□□ -0.34
RIF1-208ENST00000457745 FAM135AQ9P2D6 1515 aa12.9□□□□□ -0.34
RIF1-208ENST00000457745 TEX14Q8IWB6 1497 aa12.9□□□□□ -0.34
RIF1-208ENST00000457745 A2MP01023 1474 aa12.89□□□□□ -0.35
RIF1-208ENST00000457745 VWDEQ8N2E2 1590 aa12.89□□□□□ -0.35
RIF1-208ENST00000457745 EIF2AK4Q9P2K8 1649 aaKnown RBP12.88□□□□□ -0.35
RIF1-208ENST00000457745 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
RIF1-208ENST00000457745 NUP155O75694 1391 aa12.88□□□□□ -0.35
RIF1-208ENST00000457745 DHX29Q7Z478 1369 aaKnown RBP12.87□□□□□ -0.35
RIF1-208ENST00000457745 DSG3P32926 999 aa12.87□□□□□ -0.35
RIF1-208ENST00000457745 RNF17Q9BXT8 1623 aaKnown RBP12.87□□□□□ -0.35
RIF1-208ENST00000457745 ANKRD30BQ9BXX2 1392 aa12.86□□□□□ -0.35
RIF1-208ENST00000457745 CEP152O94986 1710 aa12.86□□□□□ -0.35
RIF1-208ENST00000457745 BCORL1Q5H9F3 1711 aa12.86□□□□□ -0.35
RIF1-208ENST00000457745 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
RIF1-208ENST00000457745 PRDM15P57071 1507 aaPredicted RBP12.86□□□□□ -0.35
RIF1-208ENST00000457745 CLSPNQ9HAW4 1339 aa12.86□□□□□ -0.35
RIF1-208ENST00000457745 ZEB1P37275 1124 aaPredicted RBP12.85□□□□□ -0.35
RIF1-208ENST00000457745 E9PCH4 1651 aa12.85□□□□□ -0.35
RIF1-208ENST00000457745 PLA2R1Q13018 1463 aa12.85□□□□□ -0.35
RIF1-208ENST00000457745 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
RIF1-208ENST00000457745 PKD2Q13563 968 aa12.84□□□□□ -0.35
RIF1-208ENST00000457745 ARHGEF40Q8TER5 1519 aa12.83□□□□□ -0.35
RIF1-208ENST00000457745 MYT1LQ9UL68 1186 aa12.83□□□□□ -0.36
RIF1-208ENST00000457745 KIF3BO15066 747 aa12.81□□□□□ -0.36
RIF1-208ENST00000457745 TET3O43151 1660 aa12.8□□□□□ -0.36
RIF1-208ENST00000457745 TRHP20396 242 aaPredicted RBP12.8□□□□□ -0.36
RIF1-208ENST00000457745 ABCC3O15438 1527 aa12.78□□□□□ -0.36
RIF1-208ENST00000457745 REREQ9P2R6 1566 aa12.78□□□□□ -0.36
RIF1-208ENST00000457745 ATP10AO60312 1499 aa12.78□□□□□ -0.36
RIF1-208ENST00000457745 RPRD2Q5VT52 1461 aaKnown RBP12.78□□□□□ -0.36
RIF1-208ENST00000457745 EFCAB6Q5THR3 1501 aa12.77□□□□□ -0.37
RIF1-208ENST00000457745 LMTK2Q8IWU2 1503 aa12.77□□□□□ -0.37
RIF1-208ENST00000457745 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.37
RIF1-208ENST00000457745 CLTCL1P53675 1640 aa12.76□□□□□ -0.37
RIF1-208ENST00000457745 CAMSAP1Q5T5Y3 1602 aa12.76□□□□□ -0.37
RIF1-208ENST00000457745 SPHKAPQ2M3C7 1700 aa12.75□□□□□ -0.37
RIF1-208ENST00000457745 AGLP35573 1532 aa12.74□□□□□ -0.37
RIF1-208ENST00000457745 CFAP65Q6ZU64 1925 aaKnown RBP12.73□□□□□ -0.37
RIF1-208ENST00000457745 NPATQ14207 1427 aa12.72□□□□□ -0.37
RIF1-208ENST00000457745 GGT6Q6P531 493 aa12.72□□□□□ -0.37
RIF1-208ENST00000457745 TRPM2O94759 1503 aa12.72□□□□□ -0.37
RIF1-208ENST00000457745 PTPRTO14522 1441 aa12.71□□□□□ -0.37
RIF1-208ENST00000457745 MROH2AA6NES4 1674 aa12.71□□□□□ -0.37
RIF1-208ENST00000457745 L3MBTL2Q969R5 705 aa12.71□□□□□ -0.37
RIF1-208ENST00000457745 CLTCQ00610 1675 aaKnown RBP12.7□□□□□ -0.38
RIF1-208ENST00000457745 SYNMO15061 1565 aa12.7□□□□□ -0.38
RIF1-208ENST00000457745 PPP1R15AO75807 674 aaPredicted RBP12.7□□□□□ -0.38
RIF1-208ENST00000457745 TONSLQ96HA7 1378 aa12.69□□□□□ -0.38
RIF1-208ENST00000457745 NBPF8Q3BBV2 869 aa12.69□□□□□ -0.38
RIF1-208ENST00000457745 ZC3H13Q5T200 1668 aaKnown RBP12.69□□□□□ -0.38
RIF1-208ENST00000457745 ACIN1Q9UKV3 1341 aaKnown RBP12.68□□□□□ -0.38
RIF1-208ENST00000457745 KANK1Q14678 1352 aa12.68□□□□□ -0.38
RIF1-208ENST00000457745 SPATA31E1Q6ZUB1 1445 aa12.67□□□□□ -0.38
RIF1-208ENST00000457745 MLECQ14165 292 aa12.66□□□□□ -0.38
RIF1-208ENST00000457745 PREX1Q8TCU6 1659 aa12.66□□□□□ -0.38
RIF1-208ENST00000457745 ZNF219Q9P2Y4 722 aaPredicted RBP12.65□□□□□ -0.38
RIF1-208ENST00000457745 PIK3C2BO00750 1634 aa12.65□□□□□ -0.38
RIF1-208ENST00000457745 CCDC144AA2RUR9 1427 aa12.64□□□□□ -0.39
RIF1-208ENST00000457745 NOS1P29475 1434 aa12.64□□□□□ -0.39
RIF1-208ENST00000457745 WASHC2CQ9Y4E1 1318 aa12.62□□□□□ -0.39
RIF1-208ENST00000457745 ARHGAP31Q2M1Z3 1444 aa12.62□□□□□ -0.39
RIF1-208ENST00000457745 FBXO31Q5XUX0 539 aaPredicted RBP12.62□□□□□ -0.39
RIF1-208ENST00000457745 MYO5BQ9ULV0 1848 aa12.62□□□□□ -0.39
RIF1-208ENST00000457745 IFT172Q9UG01 1749 aa12.62□□□□□ -0.39
RIF1-208ENST00000457745 ADGRB3O60242 1522 aa12.62□□□□□ -0.39
RIF1-208ENST00000457745 TIMELESSQ9UNS1 1208 aa12.61□□□□□ -0.39
RIF1-208ENST00000457745 ERVK-7P63135 1459 aa12.6□□□□□ -0.39
RIF1-208ENST00000457745 ATXN8OSP0DMR3 200 aa12.59□□□□□ -0.39
RIF1-208ENST00000457745 RGL3Q3MIN7 710 aa12.59□□□□□ -0.39
RIF1-208ENST00000457745 HIRIP3Q9BW71 556 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms