RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 ANKRD50Q9ULJ7 1429 aa27.49■■□□□ 1.99
TRIM13-206ENST00000457662 CNTLNQ9NXG0 1405 aa27.48■■□□□ 1.99
TRIM13-206ENST00000457662 RIMS1Q86UR5 1692 aaKnown RBP27.48■■□□□ 1.99
TRIM13-206ENST00000457662 WASHC2CQ9Y4E1 1318 aa27.44■■□□□ 1.98
TRIM13-206ENST00000457662 RNF17Q9BXT8 1623 aaKnown RBP27.43■■□□□ 1.98
TRIM13-206ENST00000457662 FAM135AQ9P2D6 1515 aa27.4■■□□□ 1.98
TRIM13-206ENST00000457662 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.4■■□□□ 1.98
TRIM13-206ENST00000457662 ZMYM3Q14202 1370 aa27.4■■□□□ 1.98
TRIM13-206ENST00000457662 CEBPAP49715 358 aaPredicted RBP27.38■■□□□ 1.97
TRIM13-206ENST00000457662 PLPPR3Q6T4P5 718 aa27.38■■□□□ 1.97
TRIM13-206ENST00000457662 KANK1Q14678 1352 aa27.37■■□□□ 1.97
TRIM13-206ENST00000457662 NAIPQ13075 1403 aa27.36■■□□□ 1.97
TRIM13-206ENST00000457662 KDM5DQ9BY66 1539 aa27.36■■□□□ 1.97
TRIM13-206ENST00000457662 CLTCQ00610 1675 aaKnown RBP27.36■■□□□ 1.97
TRIM13-206ENST00000457662 HFM1A2PYH4 1435 aa27.36■■□□□ 1.97
TRIM13-206ENST00000457662 MROH1Q8NDA8 1641 aa27.35■■□□□ 1.97
TRIM13-206ENST00000457662 MROH2AA6NES4 1674 aa27.35■■□□□ 1.97
TRIM13-206ENST00000457662 DEPDC5O75140 1603 aa27.34■■□□□ 1.97
TRIM13-206ENST00000457662 PRDM15P57071 1507 aaPredicted RBP27.33■■□□□ 1.97
TRIM13-206ENST00000457662 C3P01024 1663 aa27.31■■□□□ 1.96
TRIM13-206ENST00000457662 ABCC3O15438 1527 aa27.3■■□□□ 1.96
TRIM13-206ENST00000457662 ZC3H13Q5T200 1668 aaKnown RBP27.29■■□□□ 1.96
TRIM13-206ENST00000457662 GCC2Q8IWJ2 1684 aa27.28■■□□□ 1.96
TRIM13-206ENST00000457662 VWDEQ8N2E2 1590 aa27.26■■□□□ 1.95
TRIM13-206ENST00000457662 SETD1BQ9UPS6 1966 aaKnown RBP27.25■■□□□ 1.95
TRIM13-206ENST00000457662 UNC13BO14795 1591 aa27.24■■□□□ 1.95
TRIM13-206ENST00000457662 NPATQ14207 1427 aa27.24■■□□□ 1.95
TRIM13-206ENST00000457662 NUP155O75694 1391 aa27.24■■□□□ 1.95
TRIM13-206ENST00000457662 PZPP20742 1482 aa27.23■■□□□ 1.95
TRIM13-206ENST00000457662 LMTK2Q8IWU2 1503 aa27.22■■□□□ 1.95
TRIM13-206ENST00000457662 CEP152O94986 1710 aa27.22■■□□□ 1.95
TRIM13-206ENST00000457662 ARHGAP31Q2M1Z3 1444 aa27.21■■□□□ 1.95
TRIM13-206ENST00000457662 FBXO31Q5XUX0 539 aaPredicted RBP27.2■■□□□ 1.95
TRIM13-206ENST00000457662 SETD5Q9C0A6 1442 aa27.2■■□□□ 1.94
TRIM13-206ENST00000457662 CAMSAP1Q5T5Y3 1602 aa27.18■■□□□ 1.94
TRIM13-206ENST00000457662 ACIN1Q9UKV3 1341 aaKnown RBP27.18■■□□□ 1.94
TRIM13-206ENST00000457662 TRIM52Q96A61 297 aa27.17■■□□□ 1.94
TRIM13-206ENST00000457662 IQGAP3Q86VI3 1631 aa27.14■■□□□ 1.94
TRIM13-206ENST00000457662 TRIM26Q12899 539 aaPredicted RBP27.14■■□□□ 1.94
TRIM13-206ENST00000457662 TNRQ92752 1358 aa27.12■■□□□ 1.93
TRIM13-206ENST00000457662 UHRF1BP1Q6BDS2 1440 aa27.12■■□□□ 1.93
TRIM13-206ENST00000457662 EFCAB6Q5THR3 1501 aa27.12■■□□□ 1.93
TRIM13-206ENST00000457662 TET3O43151 1660 aa27.11■■□□□ 1.93
TRIM13-206ENST00000457662 CFAP65Q6ZU64 1925 aaKnown RBP27.1■■□□□ 1.93
TRIM13-206ENST00000457662 PREX1Q8TCU6 1659 aa27.1■■□□□ 1.93
TRIM13-206ENST00000457662 ERVK-7P63135 1459 aa27.09■■□□□ 1.93
TRIM13-206ENST00000457662 RPRD2Q5VT52 1461 aaKnown RBP27.09■■□□□ 1.93
TRIM13-206ENST00000457662 RAB3GAP2Q9H2M9 1393 aa27.08■■□□□ 1.93
TRIM13-206ENST00000457662 HRCP23327 699 aa27.08■■□□□ 1.93
TRIM13-206ENST00000457662 SPATA31D1Q6ZQQ2 1576 aa27.08■■□□□ 1.93
TRIM13-206ENST00000457662 LMTK3Q96Q04 1460 aa27.08■■□□□ 1.93
TRIM13-206ENST00000457662 SLC4A1APQ9BWU0 796 aaKnown RBP27.05■■□□□ 1.92
TRIM13-206ENST00000457662 NLRP1Q9C000 1473 aa27.02■■□□□ 1.92
TRIM13-206ENST00000457662 NOS1P29475 1434 aa27.02■■□□□ 1.92
TRIM13-206ENST00000457662 HSPA2P54652 639 aa27■■□□□ 1.91
TRIM13-206ENST00000457662 MYO3AQ8NEV4 1616 aa27■■□□□ 1.91
TRIM13-206ENST00000457662 E9PCH4 1651 aa27■■□□□ 1.91
TRIM13-206ENST00000457662 PKD2Q13563 968 aa27■■□□□ 1.91
TRIM13-206ENST00000457662 A2ML1A8K2U0 1454 aa26.99■■□□□ 1.91
TRIM13-206ENST00000457662 SLC52A1Q9NWF4 448 aa26.99■■□□□ 1.91
TRIM13-206ENST00000457662 MPHOSPH9Q99550 1183 aa26.98■■□□□ 1.91
TRIM13-206ENST00000457662 CEP170BQ9Y4F5 1589 aaPredicted RBP26.96■■□□□ 1.91
TRIM13-206ENST00000457662 IDI1Q13907 227 aa26.95■■□□□ 1.91
TRIM13-206ENST00000457662 ZNF142P52746 1687 aaPredicted RBP26.94■■□□□ 1.9
TRIM13-206ENST00000457662 THEMISQ8N1K5 641 aaPredicted RBP26.94■■□□□ 1.9
TRIM13-206ENST00000457662 SYNMO15061 1565 aa26.92■■□□□ 1.9
TRIM13-206ENST00000457662 PTPRTO14522 1441 aa26.91■■□□□ 1.9
TRIM13-206ENST00000457662 UGGT1Q9NYU2 1555 aa26.9■■□□□ 1.9
TRIM13-206ENST00000457662 STAG3Q9UJ98 1225 aa26.89■■□□□ 1.9
TRIM13-206ENST00000457662 FOXD1Q16676 465 aa26.85■■□□□ 1.89
TRIM13-206ENST00000457662 SPHKAPQ2M3C7 1700 aa26.84■■□□□ 1.89
TRIM13-206ENST00000457662 PLA2R1Q13018 1463 aa26.83■■□□□ 1.89
TRIM13-206ENST00000457662 PIK3C2BO00750 1634 aa26.83■■□□□ 1.89
TRIM13-206ENST00000457662 UBR1Q8IWV7 1749 aa26.81■■□□□ 1.88
TRIM13-206ENST00000457662 ANKLE2Q86XL3 938 aa26.81■■□□□ 1.88
TRIM13-206ENST00000457662 KDM5AP29375 1690 aaKnown RBP26.8■■□□□ 1.88
TRIM13-206ENST00000457662 TRPM2O94759 1503 aa26.8■■□□□ 1.88
TRIM13-206ENST00000457662 DMRT2Q9Y5R5 561 aa26.8■■□□□ 1.88
TRIM13-206ENST00000457662 CHGAP10645 457 aaKnown RBP26.79■■□□□ 1.88
TRIM13-206ENST00000457662 NCKAP5LQ9HCH0 1330 aa26.77■■□□□ 1.88
TRIM13-206ENST00000457662 ADGRB3O60242 1522 aa26.76■■□□□ 1.87
TRIM13-206ENST00000457662 STRCQ7RTU9 1775 aa26.76■■□□□ 1.87
TRIM13-206ENST00000457662 PCGF6Q9BYE7 350 aa26.75■■□□□ 1.87
TRIM13-206ENST00000457662 TMEM2Q9UHN6 1383 aa26.75■■□□□ 1.87
TRIM13-206ENST00000457662 EID1Q9Y6B2 187 aa26.74■■□□□ 1.87
TRIM13-206ENST00000457662 TMEM131LA2VDJ0 1609 aa26.73■■□□□ 1.87
TRIM13-206ENST00000457662 HDGFP51858 240 aaKnown RBP26.73■■□□□ 1.87
TRIM13-206ENST00000457662 TXNDC2Q86VQ3 553 aa26.73■■□□□ 1.87
TRIM13-206ENST00000457662 SLIT1O75093 1534 aa26.73■■□□□ 1.87
TRIM13-206ENST00000457662 ARHGAP23Q9P227 1491 aa26.72■■□□□ 1.87
TRIM13-206ENST00000457662 CCDC144AA2RUR9 1427 aa26.71■■□□□ 1.87
TRIM13-206ENST00000457662 CLTCL1P53675 1640 aa26.71■■□□□ 1.87
TRIM13-206ENST00000457662 LTKP29376 864 aa26.68■■□□□ 1.86
TRIM13-206ENST00000457662 ANKRD30BQ9BXX2 1392 aa26.68■■□□□ 1.86
TRIM13-206ENST00000457662 SCAF11Q99590 1463 aaKnown RBP26.66■■□□□ 1.86
TRIM13-206ENST00000457662 ZNF326Q5BKZ1 582 aaKnown RBP26.66■■□□□ 1.86
TRIM13-206ENST00000457662 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.66■■□□□ 1.86
TRIM13-206ENST00000457662 MYO5BQ9ULV0 1848 aa26.66■■□□□ 1.86
TRIM13-206ENST00000457662 KIF1BO60333 1816 aa26.65■■□□□ 1.86
TRIM13-206ENST00000457662 MED14O60244 1454 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms