RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 NCOA1Q15788 1441 aa18.65■□□□□ 0.58
C9orf139-201ENST00000457302 ILDR1Q86SU0 546 aaPredicted RBP18.64■□□□□ 0.57
C9orf139-201ENST00000457302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.57
C9orf139-201ENST00000457302 CLTCQ00610 1675 aaKnown RBP18.63■□□□□ 0.57
C9orf139-201ENST00000457302 ERBINQ96RT1 1412 aa18.62■□□□□ 0.57
C9orf139-201ENST00000457302 MROH2AA6NES4 1674 aa18.61■□□□□ 0.57
C9orf139-201ENST00000457302 EIF2AK4Q9P2K8 1649 aaKnown RBP18.61■□□□□ 0.57
C9orf139-201ENST00000457302 KANK1Q14678 1352 aa18.61■□□□□ 0.57
C9orf139-201ENST00000457302 C3P01024 1663 aa18.6■□□□□ 0.57
C9orf139-201ENST00000457302 RRBP1Q9P2E9 1410 aaKnown RBP18.6■□□□□ 0.57
C9orf139-201ENST00000457302 ADGRL2O95490 1459 aa18.59■□□□□ 0.57
C9orf139-201ENST00000457302 ROCK1Q13464 1354 aa18.57■□□□□ 0.56
C9orf139-201ENST00000457302 FAM135AQ9P2D6 1515 aa18.57■□□□□ 0.56
C9orf139-201ENST00000457302 ANKRD50Q9ULJ7 1429 aa18.57■□□□□ 0.56
C9orf139-201ENST00000457302 KDM5DQ9BY66 1539 aa18.56■□□□□ 0.56
C9orf139-201ENST00000457302 PTPRKQ15262 1439 aa18.56■□□□□ 0.56
C9orf139-201ENST00000457302 UHRF1BP1Q6BDS2 1440 aa18.55■□□□□ 0.56
C9orf139-201ENST00000457302 RNF17Q9BXT8 1623 aaKnown RBP18.54■□□□□ 0.56
C9orf139-201ENST00000457302 NPATQ14207 1427 aa18.54■□□□□ 0.56
C9orf139-201ENST00000457302 PREX1Q8TCU6 1659 aa18.54■□□□□ 0.56
C9orf139-201ENST00000457302 CFAP65Q6ZU64 1925 aaKnown RBP18.53■□□□□ 0.56
C9orf139-201ENST00000457302 HSPA2P54652 639 aa18.51■□□□□ 0.55
C9orf139-201ENST00000457302 ZC3H13Q5T200 1668 aaKnown RBP18.5■□□□□ 0.55
C9orf139-201ENST00000457302 FBXO31Q5XUX0 539 aaPredicted RBP18.5■□□□□ 0.55
C9orf139-201ENST00000457302 LMTK3Q96Q04 1460 aa18.48■□□□□ 0.55
C9orf139-201ENST00000457302 ABCC3O15438 1527 aa18.48■□□□□ 0.55
C9orf139-201ENST00000457302 PZPP20742 1482 aa18.47■□□□□ 0.55
C9orf139-201ENST00000457302 CEP152O94986 1710 aa18.46■□□□□ 0.55
C9orf139-201ENST00000457302 TNRQ92752 1358 aa18.46■□□□□ 0.55
C9orf139-201ENST00000457302 DEPDC5O75140 1603 aa18.45■□□□□ 0.54
C9orf139-201ENST00000457302 DMRT2Q9Y5R5 561 aa18.45■□□□□ 0.54
C9orf139-201ENST00000457302 MROH1Q8NDA8 1641 aa18.45■□□□□ 0.54
C9orf139-201ENST00000457302 PRDM15P57071 1507 aaPredicted RBP18.44■□□□□ 0.54
C9orf139-201ENST00000457302 NUP155O75694 1391 aa18.42■□□□□ 0.54
C9orf139-201ENST00000457302 CAMSAP1Q5T5Y3 1602 aa18.42■□□□□ 0.54
C9orf139-201ENST00000457302 THEMISQ8N1K5 641 aaPredicted RBP18.42■□□□□ 0.54
C9orf139-201ENST00000457302 TRIM52Q96A61 297 aa18.42■□□□□ 0.54
C9orf139-201ENST00000457302 ARHGAP31Q2M1Z3 1444 aa18.41■□□□□ 0.54
C9orf139-201ENST00000457302 STAG3Q9UJ98 1225 aa18.4■□□□□ 0.54
C9orf139-201ENST00000457302 LMTK2Q8IWU2 1503 aa18.39■□□□□ 0.53
C9orf139-201ENST00000457302 ACIN1Q9UKV3 1341 aaKnown RBP18.38■□□□□ 0.53
C9orf139-201ENST00000457302 NAIPQ13075 1403 aa18.38■□□□□ 0.53
C9orf139-201ENST00000457302 A2ML1A8K2U0 1454 aa18.37■□□□□ 0.53
C9orf139-201ENST00000457302 NLRP1Q9C000 1473 aa18.37■□□□□ 0.53
C9orf139-201ENST00000457302 MYO3AQ8NEV4 1616 aa18.37■□□□□ 0.53
C9orf139-201ENST00000457302 HFM1A2PYH4 1435 aa18.36■□□□□ 0.53
C9orf139-201ENST00000457302 ERVK-7P63135 1459 aa18.36■□□□□ 0.53
C9orf139-201ENST00000457302 VWDEQ8N2E2 1590 aa18.36■□□□□ 0.53
C9orf139-201ENST00000457302 UNC13BO14795 1591 aa18.35■□□□□ 0.53
C9orf139-201ENST00000457302 CEP170BQ9Y4F5 1589 aaPredicted RBP18.35■□□□□ 0.53
C9orf139-201ENST00000457302 SPATA31D1Q6ZQQ2 1576 aa18.34■□□□□ 0.53
C9orf139-201ENST00000457302 PKD2Q13563 968 aa18.34■□□□□ 0.53
C9orf139-201ENST00000457302 SLC52A1Q9NWF4 448 aa18.34■□□□□ 0.53
C9orf139-201ENST00000457302 GCC2Q8IWJ2 1684 aa18.34■□□□□ 0.53
C9orf139-201ENST00000457302 ANKLE2Q86XL3 938 aa18.33■□□□□ 0.52
C9orf139-201ENST00000457302 TET3O43151 1660 aa18.33■□□□□ 0.52
C9orf139-201ENST00000457302 ZNF142P52746 1687 aaPredicted RBP18.32■□□□□ 0.52
C9orf139-201ENST00000457302 RPRD2Q5VT52 1461 aaKnown RBP18.32■□□□□ 0.52
C9orf139-201ENST00000457302 NCKAP5LQ9HCH0 1330 aa18.31■□□□□ 0.52
C9orf139-201ENST00000457302 UGGT1Q9NYU2 1555 aa18.31■□□□□ 0.52
C9orf139-201ENST00000457302 EFCAB6Q5THR3 1501 aa18.31■□□□□ 0.52
C9orf139-201ENST00000457302 IQGAP3Q86VI3 1631 aa18.31■□□□□ 0.52
C9orf139-201ENST00000457302 IDI1Q13907 227 aa18.3■□□□□ 0.52
C9orf139-201ENST00000457302 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
C9orf139-201ENST00000457302 STRCQ7RTU9 1775 aa18.28■□□□□ 0.52
C9orf139-201ENST00000457302 CHGAP10645 457 aaKnown RBP18.28■□□□□ 0.52
C9orf139-201ENST00000457302 HDGFP51858 240 aaKnown RBP18.28■□□□□ 0.52
C9orf139-201ENST00000457302 EID1Q9Y6B2 187 aa18.28■□□□□ 0.52
C9orf139-201ENST00000457302 PLA2R1Q13018 1463 aa18.27■□□□□ 0.52
C9orf139-201ENST00000457302 SETD5Q9C0A6 1442 aa18.27■□□□□ 0.52
C9orf139-201ENST00000457302 PTPRTO14522 1441 aa18.25■□□□□ 0.51
C9orf139-201ENST00000457302 NOS1P29475 1434 aa18.25■□□□□ 0.51
C9orf139-201ENST00000457302 E9PCH4 1651 aa18.25■□□□□ 0.51
C9orf139-201ENST00000457302 TXNDC2Q86VQ3 553 aa18.24■□□□□ 0.51
C9orf139-201ENST00000457302 UBR1Q8IWV7 1749 aa18.2■□□□□ 0.5
C9orf139-201ENST00000457302 PIK3C2BO00750 1634 aa18.2■□□□□ 0.5
C9orf139-201ENST00000457302 BCANQ96GW7 911 aa18.2■□□□□ 0.5
C9orf139-201ENST00000457302 MPHOSPH9Q99550 1183 aa18.2■□□□□ 0.5
C9orf139-201ENST00000457302 SYNMO15061 1565 aa18.19■□□□□ 0.5
C9orf139-201ENST00000457302 POLR1AO95602 1720 aaPredicted RBP18.18■□□□□ 0.5
C9orf139-201ENST00000457302 HRCP23327 699 aa18.18■□□□□ 0.5
C9orf139-201ENST00000457302 RAB3GAP2Q9H2M9 1393 aa18.17■□□□□ 0.5
C9orf139-201ENST00000457302 PPP1R15AO75807 674 aaPredicted RBP18.17■□□□□ 0.5
C9orf139-201ENST00000457302 ZNF326Q5BKZ1 582 aaKnown RBP18.17■□□□□ 0.5
C9orf139-201ENST00000457302 KDM5AP29375 1690 aaKnown RBP18.17■□□□□ 0.5
C9orf139-201ENST00000457302 TMEM2Q9UHN6 1383 aa18.17■□□□□ 0.5
C9orf139-201ENST00000457302 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.16■□□□□ 0.5
C9orf139-201ENST00000457302 SPHKAPQ2M3C7 1700 aa18.15■□□□□ 0.5
C9orf139-201ENST00000457302 NPHP4O75161 1426 aaPredicted RBP18.15■□□□□ 0.5
C9orf139-201ENST00000457302 LTKP29376 864 aa18.14■□□□□ 0.49
C9orf139-201ENST00000457302 SCAF11Q99590 1463 aaKnown RBP18.13■□□□□ 0.49
C9orf139-201ENST00000457302 ADGRB3O60242 1522 aa18.13■□□□□ 0.49
C9orf139-201ENST00000457302 SLIT1O75093 1534 aa18.13■□□□□ 0.49
C9orf139-201ENST00000457302 FOXD1Q16676 465 aa18.12■□□□□ 0.49
C9orf139-201ENST00000457302 CERKQ8TCT0 537 aa18.12■□□□□ 0.49
C9orf139-201ENST00000457302 MED14O60244 1454 aa18.12■□□□□ 0.49
C9orf139-201ENST00000457302 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
C9orf139-201ENST00000457302 ARHGAP23Q9P227 1491 aa18.11■□□□□ 0.49
C9orf139-201ENST00000457302 MYO5BQ9ULV0 1848 aa18.1■□□□□ 0.49
C9orf139-201ENST00000457302 KIF1BO60333 1816 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms