RNA–Protein interactions for RNA: ENST00000457188.6

CMTM1-206, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-206ENST00000457188 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
CMTM1-206ENST00000457188 FAM135AQ9P2D6 1515 aa18.49■□□□□ 0.55
CMTM1-206ENST00000457188 TNRQ92752 1358 aa18.49■□□□□ 0.55
CMTM1-206ENST00000457188 CCDC141Q6ZP82 1450 aa18.49■□□□□ 0.55
CMTM1-206ENST00000457188 DNMT1P26358 1616 aaKnown RBP18.49■□□□□ 0.55
CMTM1-206ENST00000457188 KDM5DQ9BY66 1539 aa18.48■□□□□ 0.55
CMTM1-206ENST00000457188 WASHC2CQ9Y4E1 1318 aa18.48■□□□□ 0.55
CMTM1-206ENST00000457188 POLR1AO95602 1720 aaPredicted RBP18.47■□□□□ 0.55
CMTM1-206ENST00000457188 TOM1O60784 492 aa18.46■□□□□ 0.55
CMTM1-206ENST00000457188 PZPP20742 1482 aa18.46■□□□□ 0.54
CMTM1-206ENST00000457188 CPS1P31327 1500 aa18.45■□□□□ 0.54
CMTM1-206ENST00000457188 TSPY4P0CV99 314 aa18.45■□□□□ 0.54
CMTM1-206ENST00000457188 TSPY10P0CW01 314 aa18.45■□□□□ 0.54
CMTM1-206ENST00000457188 ANKLE2Q86XL3 938 aa18.44■□□□□ 0.54
CMTM1-206ENST00000457188 THEMISQ8N1K5 641 aaPredicted RBP18.44■□□□□ 0.54
CMTM1-206ENST00000457188 CAMSAP2Q08AD1 1489 aa18.44■□□□□ 0.54
CMTM1-206ENST00000457188 PIP4K2BP78356 416 aa18.43■□□□□ 0.54
CMTM1-206ENST00000457188 NCOA2Q15596 1464 aa18.42■□□□□ 0.54
CMTM1-206ENST00000457188 FBXO31Q5XUX0 539 aaPredicted RBP18.42■□□□□ 0.54
CMTM1-206ENST00000457188 NLRP1Q9C000 1473 aa18.41■□□□□ 0.54
CMTM1-206ENST00000457188 SHANK2Q9UPX8 1470 aa18.4■□□□□ 0.54
CMTM1-206ENST00000457188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.39■□□□□ 0.53
CMTM1-206ENST00000457188 MIA2Q96PC5 1412 aa18.39■□□□□ 0.53
CMTM1-206ENST00000457188 UGGT1Q9NYU2 1555 aa18.38■□□□□ 0.53
CMTM1-206ENST00000457188 NEURL4Q96JN8 1562 aa18.38■□□□□ 0.53
CMTM1-206ENST00000457188 ARHGEF5Q12774 1597 aa18.37■□□□□ 0.53
CMTM1-206ENST00000457188 HSPA1LP34931 641 aa18.36■□□□□ 0.53
CMTM1-206ENST00000457188 NPHP4O75161 1426 aaPredicted RBP18.35■□□□□ 0.53
CMTM1-206ENST00000457188 DEPDC5O75140 1603 aa18.34■□□□□ 0.53
CMTM1-206ENST00000457188 ZC3H13Q5T200 1668 aaKnown RBP18.33■□□□□ 0.52
CMTM1-206ENST00000457188 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
CMTM1-206ENST00000457188 MED14O60244 1454 aa18.32■□□□□ 0.52
CMTM1-206ENST00000457188 IQGAP1P46940 1657 aa18.31■□□□□ 0.52
CMTM1-206ENST00000457188 MED1Q15648 1581 aaPredicted RBP18.3■□□□□ 0.52
CMTM1-206ENST00000457188 VWDEQ8N2E2 1590 aa18.3■□□□□ 0.52
CMTM1-206ENST00000457188 RNF17Q9BXT8 1623 aaKnown RBP18.3■□□□□ 0.52
CMTM1-206ENST00000457188 ABCC3O15438 1527 aa18.28■□□□□ 0.52
CMTM1-206ENST00000457188 EIF2AK4Q9P2K8 1649 aaKnown RBP18.28■□□□□ 0.52
CMTM1-206ENST00000457188 LRRC9Q6ZRR7 1453 aa18.27■□□□□ 0.52
CMTM1-206ENST00000457188 MAST1Q9Y2H9 1570 aa18.27■□□□□ 0.52
CMTM1-206ENST00000457188 ERVK-7P63135 1459 aa18.26■□□□□ 0.51
CMTM1-206ENST00000457188 SYNMO15061 1565 aa18.25■□□□□ 0.51
CMTM1-206ENST00000457188 VPS8Q8N3P4 1428 aa18.24■□□□□ 0.51
CMTM1-206ENST00000457188 MYOM3Q5VTT5 1437 aa18.23■□□□□ 0.51
CMTM1-206ENST00000457188 DUOX2Q9NRD8 1548 aa18.22■□□□□ 0.51
CMTM1-206ENST00000457188 EID1Q9Y6B2 187 aa18.21■□□□□ 0.51
CMTM1-206ENST00000457188 LRRC7Q96NW7 1537 aa18.21■□□□□ 0.51
CMTM1-206ENST00000457188 CEP152O94986 1710 aa18.2■□□□□ 0.5
CMTM1-206ENST00000457188 SCAF11Q99590 1463 aaKnown RBP18.2■□□□□ 0.5
CMTM1-206ENST00000457188 CFAP65Q6ZU64 1925 aaKnown RBP18.2■□□□□ 0.5
CMTM1-206ENST00000457188 SENP3Q9H4L4 574 aaPredicted RBP18.2■□□□□ 0.5
CMTM1-206ENST00000457188 UBR1Q8IWV7 1749 aa18.18■□□□□ 0.5
CMTM1-206ENST00000457188 TXNDC2Q86VQ3 553 aa18.18■□□□□ 0.5
CMTM1-206ENST00000457188 STAG3Q9UJ98 1225 aa18.18■□□□□ 0.5
CMTM1-206ENST00000457188 MAP3K1Q13233 1512 aa18.18■□□□□ 0.5
CMTM1-206ENST00000457188 KANK1Q14678 1352 aa18.17■□□□□ 0.5
CMTM1-206ENST00000457188 KIF15Q9NS87 1388 aa18.17■□□□□ 0.5
CMTM1-206ENST00000457188 MROH1Q8NDA8 1641 aa18.16■□□□□ 0.5
CMTM1-206ENST00000457188 APLP2Q06481 763 aa18.16■□□□□ 0.5
CMTM1-206ENST00000457188 STRCP1A6NGW2 1772 aa18.16■□□□□ 0.5
CMTM1-206ENST00000457188 ERBINQ96RT1 1412 aa18.15■□□□□ 0.5
CMTM1-206ENST00000457188 ALKQ9UM73 1620 aa18.15■□□□□ 0.5
CMTM1-206ENST00000457188 ARHGAP31Q2M1Z3 1444 aa18.15■□□□□ 0.5
CMTM1-206ENST00000457188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.14■□□□□ 0.49
CMTM1-206ENST00000457188 SLIT1O75093 1534 aa18.13■□□□□ 0.49
CMTM1-206ENST00000457188 PRDM15P57071 1507 aaPredicted RBP18.13■□□□□ 0.49
CMTM1-206ENST00000457188 KANK4Q5T7N3 995 aaPredicted RBP18.13■□□□□ 0.49
CMTM1-206ENST00000457188 RRP7BPQ9NSQ0 103 aa18.12■□□□□ 0.49
CMTM1-206ENST00000457188 ARHGAP23Q9P227 1491 aa18.12■□□□□ 0.49
CMTM1-206ENST00000457188 LTKP29376 864 aa18.11■□□□□ 0.49
CMTM1-206ENST00000457188 CROCC2H7BZ55 1655 aa18.09■□□□□ 0.49
CMTM1-206ENST00000457188 TMEM2Q9UHN6 1383 aa18.08■□□□□ 0.49
CMTM1-206ENST00000457188 PTPN23Q9H3S7 1636 aa18.08■□□□□ 0.48
CMTM1-206ENST00000457188 ABCC5O15440 1437 aa18.07■□□□□ 0.48
CMTM1-206ENST00000457188 PIK3C2BO00750 1634 aa18.07■□□□□ 0.48
CMTM1-206ENST00000457188 LOC105371045A0A1W2PR82 267 aa18.06■□□□□ 0.48
CMTM1-206ENST00000457188 EFCAB6Q5THR3 1501 aa18.06■□□□□ 0.48
CMTM1-206ENST00000457188 ANKRD30AQ9BXX3 1397 aa18.05■□□□□ 0.48
CMTM1-206ENST00000457188 KDM5AP29375 1690 aaKnown RBP18.05■□□□□ 0.48
CMTM1-206ENST00000457188 DAPK1P53355 1430 aa18.05■□□□□ 0.48
CMTM1-206ENST00000457188 BCANQ96GW7 911 aa18.04■□□□□ 0.48
CMTM1-206ENST00000457188 FAM135BQ49AJ0 1406 aa18.03■□□□□ 0.48
CMTM1-206ENST00000457188 KCNA6P17658 529 aa18.02■□□□□ 0.48
CMTM1-206ENST00000457188 TMEM94Q12767 1356 aa18.02■□□□□ 0.47
CMTM1-206ENST00000457188 XIRP1Q702N8 1843 aaKnown RBP18.01■□□□□ 0.47
CMTM1-206ENST00000457188 IDI1Q13907 227 aa18.01■□□□□ 0.47
CMTM1-206ENST00000457188 PROSER2Q86WR7 435 aaPredicted RBP18.01■□□□□ 0.47
CMTM1-206ENST00000457188 LMTK2Q8IWU2 1503 aa18.01■□□□□ 0.47
CMTM1-206ENST00000457188 FGD6Q6ZV73 1430 aa18■□□□□ 0.47
CMTM1-206ENST00000457188 CHIC2Q9UKJ5 165 aa18■□□□□ 0.47
CMTM1-206ENST00000457188 SLC26A8Q96RN1 970 aa17.99■□□□□ 0.47
CMTM1-206ENST00000457188 SLC52A1Q9NWF4 448 aa17.99■□□□□ 0.47
CMTM1-206ENST00000457188 ADGRB3O60242 1522 aa17.98■□□□□ 0.47
CMTM1-206ENST00000457188 NKTRP30414 1462 aaKnown RBP17.97■□□□□ 0.47
CMTM1-206ENST00000457188 MSH6P52701 1360 aa17.97■□□□□ 0.47
CMTM1-206ENST00000457188 HDGFP51858 240 aaKnown RBP17.97■□□□□ 0.47
CMTM1-206ENST00000457188 PPP1R15AO75807 674 aaPredicted RBP17.96■□□□□ 0.47
CMTM1-206ENST00000457188 ROBO1Q9Y6N7 1651 aa17.96■□□□□ 0.47
CMTM1-206ENST00000457188 NOS1P29475 1434 aa17.94■□□□□ 0.46
CMTM1-206ENST00000457188 TET3O43151 1660 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms