RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 WASHC2CQ9Y4E1 1318 aa18.31■□□□□ 0.52
SYT1-204ENST00000457153 PPM1GO15355 546 aaPredicted RBP18.31■□□□□ 0.52
SYT1-204ENST00000457153 KIF14Q15058 1648 aa18.31■□□□□ 0.52
SYT1-204ENST00000457153 NUP153P49790 1475 aaKnown RBP18.28■□□□□ 0.52
SYT1-204ENST00000457153 MORC1Q86VD1 984 aa18.27■□□□□ 0.52
SYT1-204ENST00000457153 CCDC141Q6ZP82 1450 aa18.27■□□□□ 0.52
SYT1-204ENST00000457153 GPATCH8Q9UKJ3 1502 aaKnown RBP18.27■□□□□ 0.51
SYT1-204ENST00000457153 KIAA0556O60303 1618 aa18.27■□□□□ 0.51
SYT1-204ENST00000457153 ITSN2Q9NZM3 1697 aa18.26■□□□□ 0.51
SYT1-204ENST00000457153 RRP1P56182 461 aaKnown RBP18.26■□□□□ 0.51
SYT1-204ENST00000457153 GOLGA2Q08379 1002 aa18.26■□□□□ 0.51
SYT1-204ENST00000457153 MS4A1P11836 297 aa18.25■□□□□ 0.51
SYT1-204ENST00000457153 ARHGEF11O15085 1522 aa18.24■□□□□ 0.51
SYT1-204ENST00000457153 GGT6Q6P531 493 aa18.24■□□□□ 0.51
SYT1-204ENST00000457153 BECN1Q14457 450 aa18.23■□□□□ 0.51
SYT1-204ENST00000457153 C11orf95C9JLR9 678 aaPredicted RBP18.23■□□□□ 0.51
SYT1-204ENST00000457153 PNNQ9H307 717 aaKnown RBP18.23■□□□□ 0.51
SYT1-204ENST00000457153 PBRM1Q86U86 1689 aa18.22■□□□□ 0.51
SYT1-204ENST00000457153 SMG6Q86US8 1419 aaKnown RBP18.22■□□□□ 0.51
SYT1-204ENST00000457153 MAPK8IP3Q9UPT6 1336 aa18.22■□□□□ 0.51
SYT1-204ENST00000457153 NGEFQ8N5V2 710 aa18.22■□□□□ 0.51
SYT1-204ENST00000457153 PNISRQ8TF01 805 aaKnown RBP18.22■□□□□ 0.51
SYT1-204ENST00000457153 POGKQ9P215 609 aa18.21■□□□□ 0.51
SYT1-204ENST00000457153 NEUROD2Q15784 382 aa18.21■□□□□ 0.51
SYT1-204ENST00000457153 CCDC184Q52MB2 194 aa18.21■□□□□ 0.51
SYT1-204ENST00000457153 IPO9Q96P70 1041 aaKnown RBP18.19■□□□□ 0.5
SYT1-204ENST00000457153 TNNT2P45379 298 aaPredicted RBP18.18■□□□□ 0.5
SYT1-204ENST00000457153 TARBP1Q13395 1621 aaKnown RBP18.18■□□□□ 0.5
SYT1-204ENST00000457153 FTSJ3Q8IY81 847 aaKnown RBP18.18■□□□□ 0.5
SYT1-204ENST00000457153 DNMT1P26358 1616 aaKnown RBP18.18■□□□□ 0.5
SYT1-204ENST00000457153 RGS3P49796 1198 aa18.16■□□□□ 0.5
SYT1-204ENST00000457153 FRAT1Q92837 279 aaPredicted RBP18.16■□□□□ 0.5
SYT1-204ENST00000457153 GCC2Q8IWJ2 1684 aa18.15■□□□□ 0.5
SYT1-204ENST00000457153 DISP1Q96F81 1524 aa18.15■□□□□ 0.5
SYT1-204ENST00000457153 NBPF1Q3BBV0 1214 aa18.13■□□□□ 0.49
SYT1-204ENST00000457153 EXOC6Q8TAG9 804 aa18.13■□□□□ 0.49
SYT1-204ENST00000457153 CHMP4BQ9H444 224 aaKnown RBP18.13■□□□□ 0.49
SYT1-204ENST00000457153 SRPK2P78362 688 aaKnown RBP18.13■□□□□ 0.49
SYT1-204ENST00000457153 MYH16Q9H6N6 1097 aa18.12■□□□□ 0.49
SYT1-204ENST00000457153 ATP10BO94823 1461 aa18.12■□□□□ 0.49
SYT1-204ENST00000457153 SHANK2Q9UPX8 1470 aa18.12■□□□□ 0.49
SYT1-204ENST00000457153 MAGI3Q5TCQ9 1506 aa18.11■□□□□ 0.49
SYT1-204ENST00000457153 U2SURPO15042 1029 aaKnown RBP18.1■□□□□ 0.49
SYT1-204ENST00000457153 RALGAPBQ86X10 1494 aa18.1■□□□□ 0.49
SYT1-204ENST00000457153 HSP90AA1P07900 732 aaKnown RBP18.1■□□□□ 0.49
SYT1-204ENST00000457153 ERBINQ96RT1 1412 aa18.1■□□□□ 0.49
SYT1-204ENST00000457153 E9PSI1 815 aa18.1■□□□□ 0.49
SYT1-204ENST00000457153 CENPQQ7L2Z9 268 aaPredicted RBP18.1■□□□□ 0.49
SYT1-204ENST00000457153 EIF4G3O43432 1585 aaKnown RBP18.09■□□□□ 0.49
SYT1-204ENST00000457153 AFAP1Q8N556 730 aa18.09■□□□□ 0.49
SYT1-204ENST00000457153 ADGRL2O95490 1459 aa18.09■□□□□ 0.49
SYT1-204ENST00000457153 EIF5BO60841 1220 aaKnown RBP18.08■□□□□ 0.49
SYT1-204ENST00000457153 VGFO15240 615 aaPredicted RBP18.08■□□□□ 0.48
SYT1-204ENST00000457153 HDGFL2Q7Z4V5 671 aaPredicted RBP18.08■□□□□ 0.48
SYT1-204ENST00000457153 CCDC146Q8IYE0 955 aa18.06■□□□□ 0.48
SYT1-204ENST00000457153 TRAK1Q9UPV9 953 aa18.06■□□□□ 0.48
SYT1-204ENST00000457153 LAS1LQ9Y4W2 734 aaKnown RBP18.06■□□□□ 0.48
SYT1-204ENST00000457153 CENPJQ9HC77 1338 aaPredicted RBP18.06■□□□□ 0.48
SYT1-204ENST00000457153 HDGFP51858 240 aaKnown RBP18.06■□□□□ 0.48
SYT1-204ENST00000457153 U2AF1L5P0DN76 240 aaPredicted RBP18.06■□□□□ 0.48
SYT1-204ENST00000457153 U2AF1Q01081 240 aaKnown RBP eCLIP18.06■□□□□ 0.48
SYT1-204ENST00000457153 NUP160Q12769 1436 aa18.06■□□□□ 0.48
SYT1-204ENST00000457153 PDE4AP27815 886 aa18.05■□□□□ 0.48
SYT1-204ENST00000457153 TERF2IPQ9NYB0 399 aa18.05■□□□□ 0.48
SYT1-204ENST00000457153 ARHGEF12Q9NZN5 1544 aa18.05■□□□□ 0.48
SYT1-204ENST00000457153 PZPP20742 1482 aa18.05■□□□□ 0.48
SYT1-204ENST00000457153 CRBNQ96SW2 442 aa18.04■□□□□ 0.48
SYT1-204ENST00000457153 CGNL1Q0VF96 1302 aa18.04■□□□□ 0.48
SYT1-204ENST00000457153 PMFBP1Q8TBY8 1022 aa18.04■□□□□ 0.48
SYT1-204ENST00000457153 SENP3Q9H4L4 574 aaPredicted RBP18.04■□□□□ 0.48
SYT1-204ENST00000457153 EVC2Q86UK5 1308 aa18.03■□□□□ 0.48
SYT1-204ENST00000457153 SCAPERQ9BY12 1400 aa18.03■□□□□ 0.48
SYT1-204ENST00000457153 TEX14Q8IWB6 1497 aa18.03■□□□□ 0.48
SYT1-204ENST00000457153 BCL11AQ9H165 835 aa18.03■□□□□ 0.48
SYT1-204ENST00000457153 DEKP35659 375 aaKnown RBP18.03■□□□□ 0.48
SYT1-204ENST00000457153 PPP2R1AP30153 589 aa18.02■□□□□ 0.48
SYT1-204ENST00000457153 PLIN1O60240 522 aa18.02■□□□□ 0.47
SYT1-204ENST00000457153 RWDD1Q9H446 243 aaPredicted RBP18.01■□□□□ 0.47
SYT1-204ENST00000457153 STK26Q9P289 416 aa18.01■□□□□ 0.47
SYT1-204ENST00000457153 SAFB2Q14151 953 aaKnown RBP eCLIP18.01■□□□□ 0.47
SYT1-204ENST00000457153 ADAMTS8Q9UP79 889 aa18.01■□□□□ 0.47
SYT1-204ENST00000457153 IPO8O15397 1037 aaKnown RBP18.01■□□□□ 0.47
SYT1-204ENST00000457153 APAF1O14727 1248 aa18.01■□□□□ 0.47
SYT1-204ENST00000457153 CALD1Q05682 793 aaKnown RBP17.99■□□□□ 0.47
SYT1-204ENST00000457153 UHRF1BP1Q6BDS2 1440 aa17.99■□□□□ 0.47
SYT1-204ENST00000457153 OSCARQ8IYS5 282 aa17.98■□□□□ 0.47
SYT1-204ENST00000457153 HAP1P54257 671 aaPredicted RBP17.97■□□□□ 0.47
SYT1-204ENST00000457153 USP35Q9P2H5 1018 aa17.96■□□□□ 0.47
SYT1-204ENST00000457153 FAM161AQ3B820 660 aa17.96■□□□□ 0.47
SYT1-204ENST00000457153 CFAP70Q5T0N1 1121 aa17.96■□□□□ 0.47
SYT1-204ENST00000457153 CDCA7LQ96GN5 454 aa17.95■□□□□ 0.46
SYT1-204ENST00000457153 FAM135AQ9P2D6 1515 aa17.95■□□□□ 0.46
SYT1-204ENST00000457153 DUOX2Q9NRD8 1548 aa17.95■□□□□ 0.46
SYT1-204ENST00000457153 AAMPQ13685 434 aa17.94■□□□□ 0.46
SYT1-204ENST00000457153 ADGBQ8N7X0 1667 aa17.94■□□□□ 0.46
SYT1-204ENST00000457153 ANP32BQ92688 251 aaKnown RBP17.94■□□□□ 0.46
SYT1-204ENST00000457153 RUNDC1Q96C34 613 aa17.93■□□□□ 0.46
SYT1-204ENST00000457153 PRAG1Q86YV5 1406 aa17.93■□□□□ 0.46
SYT1-204ENST00000457153 PLCH2O75038 1416 aa17.92■□□□□ 0.46
SYT1-204ENST00000457153 DHX29Q7Z478 1369 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms