RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 FGD6Q6ZV73 1430 aa14.33□□□□□ -0.11
PTCHD1-202ENST00000456522 FAM50AQ14320 339 aaKnown RBP14.32□□□□□ -0.12
PTCHD1-202ENST00000456522 PTPN23Q9H3S7 1636 aa14.31□□□□□ -0.12
PTCHD1-202ENST00000456522 EFCAB2Q5VUJ9 269 aa14.31□□□□□ -0.12
PTCHD1-202ENST00000456522 ZNF644Q9H582 1327 aaPredicted RBP14.31□□□□□ -0.12
PTCHD1-202ENST00000456522 MIA2Q96PC5 1412 aa14.31□□□□□ -0.12
PTCHD1-202ENST00000456522 NKX1-1Q15270 411 aaPredicted RBP14.29□□□□□ -0.12
PTCHD1-202ENST00000456522 BCANQ96GW7 911 aa14.29□□□□□ -0.12
PTCHD1-202ENST00000456522 RRBP1Q9P2E9 1410 aaKnown RBP14.29□□□□□ -0.12
PTCHD1-202ENST00000456522 FANCAO15360 1455 aa14.28□□□□□ -0.12
PTCHD1-202ENST00000456522 ARAP3Q8WWN8 1544 aa14.28□□□□□ -0.12
PTCHD1-202ENST00000456522 PPRC1Q5VV67 1664 aaKnown RBP14.27□□□□□ -0.12
PTCHD1-202ENST00000456522 SAMD9LQ8IVG5 1584 aa14.27□□□□□ -0.12
PTCHD1-202ENST00000456522 CAMSAP2Q08AD1 1489 aa14.27□□□□□ -0.12
PTCHD1-202ENST00000456522 TSHZ2Q9NRE2 1034 aa14.27□□□□□ -0.13
PTCHD1-202ENST00000456522 ITGAEP38570 1179 aa14.26□□□□□ -0.13
PTCHD1-202ENST00000456522 TRIM26Q12899 539 aaPredicted RBP14.26□□□□□ -0.13
PTCHD1-202ENST00000456522 FARP1Q9Y4F1 1045 aaPredicted RBP14.26□□□□□ -0.13
PTCHD1-202ENST00000456522 CFAP74Q9C0B2 1584 aa14.26□□□□□ -0.13
PTCHD1-202ENST00000456522 TCOF1Q13428 1488 aaKnown RBP14.25□□□□□ -0.13
PTCHD1-202ENST00000456522 HNRNPMP52272 730 aaKnown RBP eCLIP14.25□□□□□ -0.13
PTCHD1-202ENST00000456522 TEX14Q8IWB6 1497 aa14.25□□□□□ -0.13
PTCHD1-202ENST00000456522 AKNAQ7Z591 1439 aa14.24□□□□□ -0.13
PTCHD1-202ENST00000456522 CHADLQ6NUI6 762 aa14.24□□□□□ -0.13
PTCHD1-202ENST00000456522 PYGBP11216 843 aa14.23□□□□□ -0.13
PTCHD1-202ENST00000456522 FXR2P51116 673 aaKnown RBP eCLIP14.23□□□□□ -0.13
PTCHD1-202ENST00000456522 NEO1Q92859 1461 aa14.23□□□□□ -0.13
PTCHD1-202ENST00000456522 SYCP2Q9BX26 1530 aa14.22□□□□□ -0.13
PTCHD1-202ENST00000456522 STK25O00506 426 aa14.22□□□□□ -0.13
PTCHD1-202ENST00000456522 ADGRL1O94910 1474 aa14.22□□□□□ -0.13
PTCHD1-202ENST00000456522 PLEKHH2Q8IVE3 1493 aa14.22□□□□□ -0.13
PTCHD1-202ENST00000456522 ABCC1P33527 1531 aa14.21□□□□□ -0.13
PTCHD1-202ENST00000456522 GTPBP6O43824 516 aaPredicted RBP14.21□□□□□ -0.13
PTCHD1-202ENST00000456522 SCAPERQ9BY12 1400 aa14.21□□□□□ -0.13
PTCHD1-202ENST00000456522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.21□□□□□ -0.14
PTCHD1-202ENST00000456522 ARHGEF12Q9NZN5 1544 aa14.2□□□□□ -0.14
PTCHD1-202ENST00000456522 KIAA1107Q9UPP5 1409 aa14.2□□□□□ -0.14
PTCHD1-202ENST00000456522 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
PTCHD1-202ENST00000456522 ZFP91Q96JP5 570 aaPredicted RBP14.19□□□□□ -0.14
PTCHD1-202ENST00000456522 DNMT1P26358 1616 aaKnown RBP14.19□□□□□ -0.14
PTCHD1-202ENST00000456522 PCGF6Q9BYE7 350 aa14.18□□□□□ -0.14
PTCHD1-202ENST00000456522 MBD5Q9P267 1494 aa14.18□□□□□ -0.14
PTCHD1-202ENST00000456522 ARHGEF5Q12774 1597 aa14.17□□□□□ -0.14
PTCHD1-202ENST00000456522 ABCC5O15440 1437 aa14.17□□□□□ -0.14
PTCHD1-202ENST00000456522 DAPK1P53355 1430 aa14.17□□□□□ -0.14
PTCHD1-202ENST00000456522 TRAPPC8Q9Y2L5 1435 aa14.17□□□□□ -0.14
PTCHD1-202ENST00000456522 CHIC2Q9UKJ5 165 aa14.17□□□□□ -0.14
PTCHD1-202ENST00000456522 RAPGEF3O95398 923 aa14.16□□□□□ -0.14
PTCHD1-202ENST00000456522 PRKAR2AP13861 404 aaKnown RBP14.16□□□□□ -0.14
PTCHD1-202ENST00000456522 AFAP1Q8N556 730 aa14.16□□□□□ -0.14
PTCHD1-202ENST00000456522 DENND4BO75064 1496 aaPredicted RBP14.16□□□□□ -0.14
PTCHD1-202ENST00000456522 CCDC141Q6ZP82 1450 aa14.16□□□□□ -0.14
PTCHD1-202ENST00000456522 CROCC2H7BZ55 1655 aa14.15□□□□□ -0.14
PTCHD1-202ENST00000456522 TSPY4P0CV99 314 aa14.15□□□□□ -0.14
PTCHD1-202ENST00000456522 TSPY10P0CW01 314 aa14.15□□□□□ -0.14
PTCHD1-202ENST00000456522 RSPH4AQ5TD94 716 aa14.15□□□□□ -0.14
PTCHD1-202ENST00000456522 BCL11BQ9C0K0 894 aaPredicted RBP14.15□□□□□ -0.14
PTCHD1-202ENST00000456522 MYT1LQ9UL68 1186 aa14.15□□□□□ -0.14
PTCHD1-202ENST00000456522 PTPRKQ15262 1439 aa14.15□□□□□ -0.14
PTCHD1-202ENST00000456522 ZNF467Q7Z7K2 595 aaPredicted RBP14.14□□□□□ -0.15
PTCHD1-202ENST00000456522 CCDC61Q9Y6R9 512 aa14.14□□□□□ -0.15
PTCHD1-202ENST00000456522 POGZQ7Z3K3 1410 aa14.14□□□□□ -0.15
PTCHD1-202ENST00000456522 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
PTCHD1-202ENST00000456522 RICTORQ6R327 1708 aa14.12□□□□□ -0.15
PTCHD1-202ENST00000456522 RYDENQ9NUL5 291 aaKnown RBP14.12□□□□□ -0.15
PTCHD1-202ENST00000456522 C9orf84Q5VXU9 1444 aa14.12□□□□□ -0.15
PTCHD1-202ENST00000456522 ZNF518AQ6AHZ1 1483 aa14.12□□□□□ -0.15
PTCHD1-202ENST00000456522 COL17A1Q9UMD9 1497 aaPredicted RBP14.12□□□□□ -0.15
PTCHD1-202ENST00000456522 TSPYL2Q9H2G4 693 aaPredicted RBP14.11□□□□□ -0.15
PTCHD1-202ENST00000456522 STK24Q9Y6E0 443 aa14.11□□□□□ -0.15
PTCHD1-202ENST00000456522 ADGBQ8N7X0 1667 aa14.1□□□□□ -0.15
PTCHD1-202ENST00000456522 FRMPD1Q5SYB0 1578 aa14.1□□□□□ -0.15
PTCHD1-202ENST00000456522 RRP7BPQ9NSQ0 103 aa14.1□□□□□ -0.15
PTCHD1-202ENST00000456522 KDM6BO15054 1643 aa14.1□□□□□ -0.15
PTCHD1-202ENST00000456522 SHANK2Q9UPX8 1470 aa14.1□□□□□ -0.15
PTCHD1-202ENST00000456522 MAST1Q9Y2H9 1570 aa14.09□□□□□ -0.15
PTCHD1-202ENST00000456522 KDM5CP41229 1560 aa14.08□□□□□ -0.16
PTCHD1-202ENST00000456522 ANKRD30AQ9BXX3 1397 aa14.08□□□□□ -0.16
PTCHD1-202ENST00000456522 ATP7AQ04656 1500 aa14.07□□□□□ -0.16
PTCHD1-202ENST00000456522 HECW2Q9P2P5 1572 aa14.07□□□□□ -0.16
PTCHD1-202ENST00000456522 KIDINS220Q9ULH0 1771 aa14.06□□□□□ -0.16
PTCHD1-202ENST00000456522 ZFYVE16Q7Z3T8 1539 aa14.06□□□□□ -0.16
PTCHD1-202ENST00000456522 INO80Q9ULG1 1556 aaPredicted RBP14.06□□□□□ -0.16
PTCHD1-202ENST00000456522 CHRDL2Q6WN34 429 aa14.06□□□□□ -0.16
PTCHD1-202ENST00000456522 ADGRL2O95490 1459 aa14.06□□□□□ -0.16
PTCHD1-202ENST00000456522 PDAP1Q13442 181 aaKnown RBP14.05□□□□□ -0.16
PTCHD1-202ENST00000456522 ROCK1Q13464 1354 aa14.05□□□□□ -0.16
PTCHD1-202ENST00000456522 RTEL1-TNFRSF6BF6WH68 1400 aa14.05□□□□□ -0.16
PTCHD1-202ENST00000456522 NCOA1Q15788 1441 aa14.05□□□□□ -0.16
PTCHD1-202ENST00000456522 MLH3Q9UHC1 1453 aa14.05□□□□□ -0.16
PTCHD1-202ENST00000456522 ZNF579Q8NAF0 562 aaKnown RBP14.04□□□□□ -0.16
PTCHD1-202ENST00000456522 KIF15Q9NS87 1388 aa14.04□□□□□ -0.16
PTCHD1-202ENST00000456522 ZMYM4Q5VZL5 1548 aa14.04□□□□□ -0.16
PTCHD1-202ENST00000456522 PIP4P2Q8N4L2 257 aa14.03□□□□□ -0.16
PTCHD1-202ENST00000456522 PLXNC1O60486 1568 aa14.03□□□□□ -0.16
PTCHD1-202ENST00000456522 ABCA6Q8N139 1617 aa14.02□□□□□ -0.16
PTCHD1-202ENST00000456522 YEATS2Q9ULM3 1422 aa14.02□□□□□ -0.16
PTCHD1-202ENST00000456522 GCC2Q8IWJ2 1684 aa14.01□□□□□ -0.17
PTCHD1-202ENST00000456522 HFM1A2PYH4 1435 aa14.01□□□□□ -0.17
PTCHD1-202ENST00000456522 NAIPQ13075 1403 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms