RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 ADGRL2O95490 1459 aa21.52■■□□□ 1.04
LINC01563-201ENST00000456235 ANKRD30AQ9BXX3 1397 aa21.51■■□□□ 1.03
LINC01563-201ENST00000456235 NCOA1Q15788 1441 aa21.51■■□□□ 1.03
LINC01563-201ENST00000456235 MROH2AA6NES4 1674 aa21.49■■□□□ 1.03
LINC01563-201ENST00000456235 ESF1Q9H501 851 aaKnown RBP21.48■■□□□ 1.03
LINC01563-201ENST00000456235 ERBINQ96RT1 1412 aa21.46■■□□□ 1.03
LINC01563-201ENST00000456235 KDM5DQ9BY66 1539 aa21.46■■□□□ 1.03
LINC01563-201ENST00000456235 DEPDC5O75140 1603 aa21.45■■□□□ 1.02
LINC01563-201ENST00000456235 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.45■■□□□ 1.02
LINC01563-201ENST00000456235 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.43■■□□□ 1.02
LINC01563-201ENST00000456235 ABCC3O15438 1527 aa21.43■■□□□ 1.02
LINC01563-201ENST00000456235 PRDM15P57071 1507 aaPredicted RBP21.42■■□□□ 1.02
LINC01563-201ENST00000456235 CAMSAP1Q5T5Y3 1602 aa21.42■■□□□ 1.02
LINC01563-201ENST00000456235 ZC3H13Q5T200 1668 aaKnown RBP21.41■■□□□ 1.02
LINC01563-201ENST00000456235 CNTLNQ9NXG0 1405 aa21.41■■□□□ 1.02
LINC01563-201ENST00000456235 GCC2Q8IWJ2 1684 aa21.4■■□□□ 1.02
LINC01563-201ENST00000456235 PREX1Q8TCU6 1659 aa21.4■■□□□ 1.02
LINC01563-201ENST00000456235 ANKRD50Q9ULJ7 1429 aa21.39■■□□□ 1.02
LINC01563-201ENST00000456235 ROCK1Q13464 1354 aa21.38■■□□□ 1.01
LINC01563-201ENST00000456235 ZMYM3Q14202 1370 aa21.38■■□□□ 1.01
LINC01563-201ENST00000456235 WASHC2CQ9Y4E1 1318 aa21.38■■□□□ 1.01
LINC01563-201ENST00000456235 CFAP65Q6ZU64 1925 aaKnown RBP21.38■■□□□ 1.01
LINC01563-201ENST00000456235 UNC13BO14795 1591 aa21.36■■□□□ 1.01
LINC01563-201ENST00000456235 LMTK3Q96Q04 1460 aa21.36■■□□□ 1.01
LINC01563-201ENST00000456235 MYO3AQ8NEV4 1616 aa21.35■■□□□ 1.01
LINC01563-201ENST00000456235 FAM135AQ9P2D6 1515 aa21.32■■□□□ 1
LINC01563-201ENST00000456235 VWDEQ8N2E2 1590 aa21.31■■□□□ 1
LINC01563-201ENST00000456235 HSPA2P54652 639 aa21.31■■□□□ 1
LINC01563-201ENST00000456235 FBXO31Q5XUX0 539 aaPredicted RBP21.31■■□□□ 1
LINC01563-201ENST00000456235 NAIPQ13075 1403 aa21.3■■□□□ 1
LINC01563-201ENST00000456235 PZPP20742 1482 aa21.3■■□□□ 1
LINC01563-201ENST00000456235 KANK1Q14678 1352 aa21.27■■□□□ 1
LINC01563-201ENST00000456235 IQGAP3Q86VI3 1631 aa21.26■□□□□ 0.99
LINC01563-201ENST00000456235 EFCAB6Q5THR3 1501 aa21.26■□□□□ 0.99
LINC01563-201ENST00000456235 PPP6R1Q9UPN7 881 aa21.26■□□□□ 0.99
LINC01563-201ENST00000456235 UHRF1BP1Q6BDS2 1440 aa21.26■□□□□ 0.99
LINC01563-201ENST00000456235 HFM1A2PYH4 1435 aa21.25■□□□□ 0.99
LINC01563-201ENST00000456235 TET3O43151 1660 aa21.24■□□□□ 0.99
LINC01563-201ENST00000456235 ZNF142P52746 1687 aaPredicted RBP21.24■□□□□ 0.99
LINC01563-201ENST00000456235 NPATQ14207 1427 aa21.24■□□□□ 0.99
LINC01563-201ENST00000456235 ERVK-7P63135 1459 aa21.24■□□□□ 0.99
LINC01563-201ENST00000456235 CEP170BQ9Y4F5 1589 aaPredicted RBP21.23■□□□□ 0.99
LINC01563-201ENST00000456235 E9PCH4 1651 aa21.23■□□□□ 0.99
LINC01563-201ENST00000456235 LMTK2Q8IWU2 1503 aa21.23■□□□□ 0.99
LINC01563-201ENST00000456235 SPATA31D1Q6ZQQ2 1576 aa21.23■□□□□ 0.99
LINC01563-201ENST00000456235 TNRQ92752 1358 aa21.22■□□□□ 0.99
LINC01563-201ENST00000456235 SETD1BQ9UPS6 1966 aaKnown RBP21.21■□□□□ 0.99
LINC01563-201ENST00000456235 NUP155O75694 1391 aa21.2■□□□□ 0.98
LINC01563-201ENST00000456235 SYNMO15061 1565 aa21.19■□□□□ 0.98
LINC01563-201ENST00000456235 STRCQ7RTU9 1775 aa21.15■□□□□ 0.98
LINC01563-201ENST00000456235 ARHGAP31Q2M1Z3 1444 aa21.15■□□□□ 0.98
LINC01563-201ENST00000456235 PIK3C2BO00750 1634 aa21.15■□□□□ 0.98
LINC01563-201ENST00000456235 UGGT1Q9NYU2 1555 aa21.14■□□□□ 0.98
LINC01563-201ENST00000456235 A2ML1A8K2U0 1454 aa21.13■□□□□ 0.97
LINC01563-201ENST00000456235 TRIM52Q96A61 297 aa21.13■□□□□ 0.97
LINC01563-201ENST00000456235 UBR1Q8IWV7 1749 aa21.12■□□□□ 0.97
LINC01563-201ENST00000456235 MYO5BQ9ULV0 1848 aa21.11■□□□□ 0.97
LINC01563-201ENST00000456235 SPHKAPQ2M3C7 1700 aa21.1■□□□□ 0.97
LINC01563-201ENST00000456235 SETD5Q9C0A6 1442 aa21.09■□□□□ 0.97
LINC01563-201ENST00000456235 NLRP1Q9C000 1473 aa21.08■□□□□ 0.97
LINC01563-201ENST00000456235 RAB3GAP2Q9H2M9 1393 aa21.08■□□□□ 0.96
LINC01563-201ENST00000456235 POLR1AO95602 1720 aaPredicted RBP21.07■□□□□ 0.96
LINC01563-201ENST00000456235 NOS1P29475 1434 aa21.07■□□□□ 0.96
LINC01563-201ENST00000456235 RPRD2Q5VT52 1461 aaKnown RBP21.07■□□□□ 0.96
LINC01563-201ENST00000456235 NCKAP5LQ9HCH0 1330 aa21.04■□□□□ 0.96
LINC01563-201ENST00000456235 FOXD1Q16676 465 aa21.03■□□□□ 0.96
LINC01563-201ENST00000456235 ADGRB3O60242 1522 aa21.02■□□□□ 0.96
LINC01563-201ENST00000456235 CLTCL1P53675 1640 aa21.01■□□□□ 0.95
LINC01563-201ENST00000456235 NEURL4Q96JN8 1562 aa21.01■□□□□ 0.95
LINC01563-201ENST00000456235 PKD2Q13563 968 aa20.99■□□□□ 0.95
LINC01563-201ENST00000456235 IDI1Q13907 227 aa20.99■□□□□ 0.95
LINC01563-201ENST00000456235 SLC4A1APQ9BWU0 796 aaKnown RBP20.99■□□□□ 0.95
LINC01563-201ENST00000456235 SENP3Q9H4L4 574 aaPredicted RBP20.98■□□□□ 0.95
LINC01563-201ENST00000456235 PLA2R1Q13018 1463 aa20.98■□□□□ 0.95
LINC01563-201ENST00000456235 TMEM131LA2VDJ0 1609 aa20.97■□□□□ 0.95
LINC01563-201ENST00000456235 TRPM2O94759 1503 aa20.96■□□□□ 0.95
LINC01563-201ENST00000456235 CHGAP10645 457 aaKnown RBP20.96■□□□□ 0.95
LINC01563-201ENST00000456235 STAG3Q9UJ98 1225 aa20.96■□□□□ 0.95
LINC01563-201ENST00000456235 KDM5AP29375 1690 aaKnown RBP20.94■□□□□ 0.94
LINC01563-201ENST00000456235 IQGAP1P46940 1657 aa20.93■□□□□ 0.94
LINC01563-201ENST00000456235 MPHOSPH9Q99550 1183 aa20.92■□□□□ 0.94
LINC01563-201ENST00000456235 PTPRTO14522 1441 aa20.92■□□□□ 0.94
LINC01563-201ENST00000456235 KIF1BO60333 1816 aa20.91■□□□□ 0.94
LINC01563-201ENST00000456235 THEMISQ8N1K5 641 aaPredicted RBP20.91■□□□□ 0.94
LINC01563-201ENST00000456235 SLIT1O75093 1534 aa20.9■□□□□ 0.94
LINC01563-201ENST00000456235 ARHGAP23Q9P227 1491 aa20.89■□□□□ 0.94
LINC01563-201ENST00000456235 NUTM2DQ5VT03 806 aaPredicted RBP20.89■□□□□ 0.93
LINC01563-201ENST00000456235 SLC52A1Q9NWF4 448 aa20.88■□□□□ 0.93
LINC01563-201ENST00000456235 SCAF11Q99590 1463 aaKnown RBP20.88■□□□□ 0.93
LINC01563-201ENST00000456235 LTKP29376 864 aa20.87■□□□□ 0.93
LINC01563-201ENST00000456235 NPHP4O75161 1426 aaPredicted RBP20.87■□□□□ 0.93
LINC01563-201ENST00000456235 TMEM2Q9UHN6 1383 aa20.86■□□□□ 0.93
LINC01563-201ENST00000456235 TRIM26Q12899 539 aaPredicted RBP20.86■□□□□ 0.93
LINC01563-201ENST00000456235 ANKLE2Q86XL3 938 aa20.85■□□□□ 0.93
LINC01563-201ENST00000456235 TXNDC2Q86VQ3 553 aa20.84■□□□□ 0.93
LINC01563-201ENST00000456235 RIMS2Q9UQ26 1411 aa20.84■□□□□ 0.93
LINC01563-201ENST00000456235 ZFYVE9O95405 1425 aa20.82■□□□□ 0.92
LINC01563-201ENST00000456235 MED14O60244 1454 aa20.81■□□□□ 0.92
LINC01563-201ENST00000456235 ZNF335Q9H4Z2 1342 aaPredicted RBP20.8■□□□□ 0.92
LINC01563-201ENST00000456235 STRCP1A6NGW2 1772 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms