RNA–Protein interactions for RNA: ENST00000456224.7

SCN11A-203, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-203ENST00000456224 SHANK2Q9UPX8 1470 aa6.51□□□□□ -1.37
SCN11A-203ENST00000456224 MAPKBP1O60336 1514 aa6.51□□□□□ -1.37
SCN11A-203ENST00000456224 SCAPERQ9BY12 1400 aa6.51□□□□□ -1.37
SCN11A-203ENST00000456224 DNMT1P26358 1616 aaKnown RBP6.51□□□□□ -1.37
SCN11A-203ENST00000456224 CHMP4BQ9H444 224 aaKnown RBP6.51□□□□□ -1.37
SCN11A-203ENST00000456224 ABCC5O15440 1437 aa6.5□□□□□ -1.37
SCN11A-203ENST00000456224 NUDCQ9Y266 331 aa6.5□□□□□ -1.37
SCN11A-203ENST00000456224 ZBED9Q6R2W3 1325 aa6.5□□□□□ -1.37
SCN11A-203ENST00000456224 NLRP13Q86W25 1043 aa6.48□□□□□ -1.37
SCN11A-203ENST00000456224 EIF2AK4Q9P2K8 1649 aaKnown RBP6.47□□□□□ -1.37
SCN11A-203ENST00000456224 NGEFQ8N5V2 710 aa6.47□□□□□ -1.37
SCN11A-203ENST00000456224 PPP6R1Q9UPN7 881 aa6.47□□□□□ -1.37
SCN11A-203ENST00000456224 CC2D1BQ5T0F9 858 aaKnown RBP6.47□□□□□ -1.37
SCN11A-203ENST00000456224 PRKRIP1Q9H875 184 aaPredicted RBP6.47□□□□□ -1.37
SCN11A-203ENST00000456224 BRD4O60885 1362 aaPredicted RBP6.47□□□□□ -1.37
SCN11A-203ENST00000456224 ZNF608Q9ULD9 1512 aaPredicted RBP6.47□□□□□ -1.37
SCN11A-203ENST00000456224 NUP153P49790 1475 aaKnown RBP6.47□□□□□ -1.37
SCN11A-203ENST00000456224 RPRD2Q5VT52 1461 aaKnown RBP6.47□□□□□ -1.37
SCN11A-203ENST00000456224 WASHC2AQ641Q2 1341 aa6.47□□□□□ -1.37
SCN11A-203ENST00000456224 WASHC2CQ9Y4E1 1318 aa6.47□□□□□ -1.37
SCN11A-203ENST00000456224 MYH16Q9H6N6 1097 aa6.46□□□□□ -1.37
SCN11A-203ENST00000456224 MAPK8IP3Q9UPT6 1336 aa6.46□□□□□ -1.38
SCN11A-203ENST00000456224 ANKRD30BQ9BXX2 1392 aa6.46□□□□□ -1.38
SCN11A-203ENST00000456224 BECN1Q14457 450 aa6.46□□□□□ -1.38
SCN11A-203ENST00000456224 ERBINQ96RT1 1412 aa6.46□□□□□ -1.38
SCN11A-203ENST00000456224 DUOX2Q9NRD8 1548 aa6.45□□□□□ -1.38
SCN11A-203ENST00000456224 ADGRL2O95490 1459 aa6.45□□□□□ -1.38
SCN11A-203ENST00000456224 POGKQ9P215 609 aa6.45□□□□□ -1.38
SCN11A-203ENST00000456224 PLB1Q6P1J6 1458 aa6.45□□□□□ -1.38
SCN11A-203ENST00000456224 ZNF644Q9H582 1327 aaPredicted RBP6.45□□□□□ -1.38
SCN11A-203ENST00000456224 NUP160Q12769 1436 aa6.45□□□□□ -1.38
SCN11A-203ENST00000456224 ANP32EQ9BTT0 268 aa6.45□□□□□ -1.38
SCN11A-203ENST00000456224 ARHGEF11O15085 1522 aa6.45□□□□□ -1.38
SCN11A-203ENST00000456224 GPATCH8Q9UKJ3 1502 aaKnown RBP6.45□□□□□ -1.38
SCN11A-203ENST00000456224 KIF7Q2M1P5 1343 aa6.45□□□□□ -1.38
SCN11A-203ENST00000456224 KIF3BO15066 747 aa6.45□□□□□ -1.38
SCN11A-203ENST00000456224 MORC1Q86VD1 984 aa6.45□□□□□ -1.38
SCN11A-203ENST00000456224 IRX6P78412 446 aaPredicted RBP6.44□□□□□ -1.38
SCN11A-203ENST00000456224 NPM2Q86SE8 214 aaKnown RBP6.44□□□□□ -1.38
SCN11A-203ENST00000456224 FAM135AQ9P2D6 1515 aa6.44□□□□□ -1.38
SCN11A-203ENST00000456224 HDGFL2Q7Z4V5 671 aaPredicted RBP6.44□□□□□ -1.38
SCN11A-203ENST00000456224 CFAP44Q96MT7 982 aa6.44□□□□□ -1.38
SCN11A-203ENST00000456224 SALL2Q9Y467 1007 aaPredicted RBP6.44□□□□□ -1.38
SCN11A-203ENST00000456224 ARHGEF12Q9NZN5 1544 aa6.44□□□□□ -1.38
SCN11A-203ENST00000456224 CALD1Q05682 793 aaKnown RBP6.44□□□□□ -1.38
SCN11A-203ENST00000456224 NCOA1Q15788 1441 aa6.44□□□□□ -1.38
SCN11A-203ENST00000456224 DISP1Q96F81 1524 aa6.43□□□□□ -1.38
SCN11A-203ENST00000456224 OSCARQ8IYS5 282 aa6.43□□□□□ -1.38
SCN11A-203ENST00000456224 RCAN3Q9UKA8 241 aa6.43□□□□□ -1.38
SCN11A-203ENST00000456224 ARHGEF5Q12774 1597 aa6.43□□□□□ -1.38
SCN11A-203ENST00000456224 ADCY10Q96PN6 1610 aa6.43□□□□□ -1.38
SCN11A-203ENST00000456224 PPM1GO15355 546 aaPredicted RBP6.43□□□□□ -1.38
SCN11A-203ENST00000456224 CEP170Q5SW79 1584 aa6.43□□□□□ -1.38
SCN11A-203ENST00000456224 TCERG1O14776 1098 aaKnown RBP6.42□□□□□ -1.38
SCN11A-203ENST00000456224 RALGAPBQ86X10 1494 aa6.42□□□□□ -1.38
SCN11A-203ENST00000456224 ST20-MTHFSA0A0A6YYL1 179 aa6.42□□□□□ -1.38
SCN11A-203ENST00000456224 FTSJ3Q8IY81 847 aaKnown RBP6.41□□□□□ -1.38
SCN11A-203ENST00000456224 VGFO15240 615 aaPredicted RBP6.41□□□□□ -1.38
SCN11A-203ENST00000456224 CGNL1Q0VF96 1302 aa6.41□□□□□ -1.38
SCN11A-203ENST00000456224 CFAP74Q9C0B2 1584 aa6.41□□□□□ -1.38
SCN11A-203ENST00000456224 TERF2IPQ9NYB0 399 aa6.41□□□□□ -1.38
SCN11A-203ENST00000456224 RPGRIP1LQ68CZ1 1315 aa6.41□□□□□ -1.38
SCN11A-203ENST00000456224 EVC2Q86UK5 1308 aa6.41□□□□□ -1.38
SCN11A-203ENST00000456224 MYCNP04198 464 aaPredicted RBP6.4□□□□□ -1.38
SCN11A-203ENST00000456224 NOP58Q9Y2X3 529 aaKnown RBP6.4□□□□□ -1.38
SCN11A-203ENST00000456224 ABCC2Q92887 1545 aa6.4□□□□□ -1.38
SCN11A-203ENST00000456224 ATP10BO94823 1461 aa6.4□□□□□ -1.38
SCN11A-203ENST00000456224 PTPRKQ15262 1439 aa6.4□□□□□ -1.39
SCN11A-203ENST00000456224 GGT6Q6P531 493 aa6.4□□□□□ -1.39
SCN11A-203ENST00000456224 CASC1Q6TDU7 716 aa6.4□□□□□ -1.39
SCN11A-203ENST00000456224 GOLGA2Q08379 1002 aa6.4□□□□□ -1.39
SCN11A-203ENST00000456224 SMG6Q86US8 1419 aaKnown RBP6.39□□□□□ -1.39
SCN11A-203ENST00000456224 MSH5O43196 834 aa6.39□□□□□ -1.39
SCN11A-203ENST00000456224 AAMPQ13685 434 aa6.39□□□□□ -1.39
SCN11A-203ENST00000456224 PANK3Q9H999 370 aa6.39□□□□□ -1.39
SCN11A-203ENST00000456224 SRPK2P78362 688 aaKnown RBP6.39□□□□□ -1.39
SCN11A-203ENST00000456224 PMFBP1Q8TBY8 1022 aa6.39□□□□□ -1.39
SCN11A-203ENST00000456224 ABCA8O94911 1581 aa6.39□□□□□ -1.39
SCN11A-203ENST00000456224 PLCH2O75038 1416 aa6.39□□□□□ -1.39
SCN11A-203ENST00000456224 ATXN8OSP0DMR3 200 aa6.39□□□□□ -1.39
SCN11A-203ENST00000456224 TPRNQ4KMQ1 711 aa6.39□□□□□ -1.39
SCN11A-203ENST00000456224 IPO8O15397 1037 aaKnown RBP6.38□□□□□ -1.39
SCN11A-203ENST00000456224 TEX14Q8IWB6 1497 aa6.38□□□□□ -1.39
SCN11A-203ENST00000456224 MAST1Q9Y2H9 1570 aa6.38□□□□□ -1.39
SCN11A-203ENST00000456224 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.38□□□□□ -1.39
SCN11A-203ENST00000456224 RBM19Q9Y4C8 960 aaKnown RBP6.38□□□□□ -1.39
SCN11A-203ENST00000456224 RTEL1-TNFRSF6BF6WH68 1400 aa6.38□□□□□ -1.39
SCN11A-203ENST00000456224 NINLQ9Y2I6 1382 aa6.38□□□□□ -1.39
SCN11A-203ENST00000456224 E9PSI1 815 aa6.38□□□□□ -1.39
SCN11A-203ENST00000456224 ANP32BQ92688 251 aaKnown RBP6.38□□□□□ -1.39
SCN11A-203ENST00000456224 TSHZ2Q9NRE2 1034 aa6.38□□□□□ -1.39
SCN11A-203ENST00000456224 MYO5CQ9NQX4 1742 aa6.37□□□□□ -1.39
SCN11A-203ENST00000456224 CROCC2H7BZ55 1655 aa6.37□□□□□ -1.39
SCN11A-203ENST00000456224 SYCP2Q9BX26 1530 aa6.37□□□□□ -1.39
SCN11A-203ENST00000456224 LMOD3Q0VAK6 560 aa6.37□□□□□ -1.39
SCN11A-203ENST00000456224 ADGRL1O94910 1474 aa6.37□□□□□ -1.39
SCN11A-203ENST00000456224 HSP90AA1P07900 732 aaKnown RBP6.37□□□□□ -1.39
SCN11A-203ENST00000456224 RRP1P56182 461 aaKnown RBP6.37□□□□□ -1.39
SCN11A-203ENST00000456224 B4GALNT3Q6L9W6 998 aa6.37□□□□□ -1.39
SCN11A-203ENST00000456224 UHRF1BP1Q6BDS2 1440 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms