RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 ZNF326Q5BKZ1 582 aaKnown RBP27.64■■■□□ 2.01
CSPG5-203ENST00000456150 FAM135AQ9P2D6 1515 aa27.62■■■□□ 2.01
CSPG5-203ENST00000456150 ARAP3Q8WWN8 1544 aa27.61■■■□□ 2.01
CSPG5-203ENST00000456150 MRS2Q9HD23 443 aa27.61■■■□□ 2.01
CSPG5-203ENST00000456150 PLEKHH2Q8IVE3 1493 aa27.6■■■□□ 2.01
CSPG5-203ENST00000456150 CCDC184Q52MB2 194 aa27.6■■■□□ 2.01
CSPG5-203ENST00000456150 ABCC1P33527 1531 aa27.58■■■□□ 2.01
CSPG5-203ENST00000456150 UNC13BO14795 1591 aa27.58■■■□□ 2.01
CSPG5-203ENST00000456150 FANCAO15360 1455 aa27.57■■■□□ 2
CSPG5-203ENST00000456150 PLXNC1O60486 1568 aa27.57■■■□□ 2
CSPG5-203ENST00000456150 ROCK2O75116 1388 aaKnown RBP27.56■■■□□ 2
CSPG5-203ENST00000456150 DHX29Q7Z478 1369 aaKnown RBP27.54■■■□□ 2
CSPG5-203ENST00000456150 CARD11Q9BXL7 1154 aa27.53■■■□□ 2
CSPG5-203ENST00000456150 TRAPPC8Q9Y2L5 1435 aa27.53■■■□□ 2
CSPG5-203ENST00000456150 FAM9BQ8IZU0 186 aa27.52■■■□□ 2
CSPG5-203ENST00000456150 CD109Q6YHK3 1445 aa27.52■■■□□ 2
CSPG5-203ENST00000456150 MYT1Q01538 1121 aa27.51■■□□□ 1.99
CSPG5-203ENST00000456150 ZBED9Q6R2W3 1325 aa27.5■■□□□ 1.99
CSPG5-203ENST00000456150 IQGAP3Q86VI3 1631 aa27.48■■□□□ 1.99
CSPG5-203ENST00000456150 CCDC144AA2RUR9 1427 aa27.48■■□□□ 1.99
CSPG5-203ENST00000456150 DCAF11Q8TEB1 546 aa27.47■■□□□ 1.99
CSPG5-203ENST00000456150 AFAP1Q8N556 730 aa27.46■■□□□ 1.99
CSPG5-203ENST00000456150 DUOX2Q9NRD8 1548 aa27.46■■□□□ 1.99
CSPG5-203ENST00000456150 ADGRL1O94910 1474 aa27.45■■□□□ 1.98
CSPG5-203ENST00000456150 POLR3GLQ9BT43 218 aa27.45■■□□□ 1.98
CSPG5-203ENST00000456150 KDM2AQ9Y2K7 1162 aa27.45■■□□□ 1.98
CSPG5-203ENST00000456150 ERICH6BQ5W0A0 696 aa27.44■■□□□ 1.98
CSPG5-203ENST00000456150 SCAPERQ9BY12 1400 aa27.43■■□□□ 1.98
CSPG5-203ENST00000456150 TRPM1Q7Z4N2 1603 aa27.43■■□□□ 1.98
CSPG5-203ENST00000456150 ERBINQ96RT1 1412 aa27.41■■□□□ 1.98
CSPG5-203ENST00000456150 PRAG1Q86YV5 1406 aa27.4■■□□□ 1.98
CSPG5-203ENST00000456150 MAGI2Q86UL8 1455 aa27.39■■□□□ 1.98
CSPG5-203ENST00000456150 MAP3K4Q9Y6R4 1608 aa27.38■■□□□ 1.97
CSPG5-203ENST00000456150 DIP2BQ9P265 1576 aa27.37■■□□□ 1.97
CSPG5-203ENST00000456150 E9PCH4 1651 aa27.37■■□□□ 1.97
CSPG5-203ENST00000456150 ST20-MTHFSA0A0A6YYL1 179 aa27.37■■□□□ 1.97
CSPG5-203ENST00000456150 PLA2R1Q13018 1463 aa27.36■■□□□ 1.97
CSPG5-203ENST00000456150 GLI2P10070 1586 aa27.36■■□□□ 1.97
CSPG5-203ENST00000456150 FAM69CQ0P6D2 419 aa27.36■■□□□ 1.97
CSPG5-203ENST00000456150 SPAG9O60271 1321 aaKnown RBP27.36■■□□□ 1.97
CSPG5-203ENST00000456150 LAMC1P11047 1609 aa27.36■■□□□ 1.97
CSPG5-203ENST00000456150 KTN1Q86UP2 1357 aaKnown RBP27.34■■□□□ 1.97
CSPG5-203ENST00000456150 ATP10AO60312 1499 aa27.34■■□□□ 1.97
CSPG5-203ENST00000456150 CFAP74Q9C0B2 1584 aa27.34■■□□□ 1.97
CSPG5-203ENST00000456150 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.34■■□□□ 1.97
CSPG5-203ENST00000456150 ZFYVE16Q7Z3T8 1539 aa27.34■■□□□ 1.97
CSPG5-203ENST00000456150 EIF2AK4Q9P2K8 1649 aaKnown RBP27.32■■□□□ 1.96
CSPG5-203ENST00000456150 A2MP01023 1474 aa27.32■■□□□ 1.96
CSPG5-203ENST00000456150 GPRASP1Q5JY77 1395 aa27.3■■□□□ 1.96
CSPG5-203ENST00000456150 RTEL1-TNFRSF6BF6WH68 1400 aa27.3■■□□□ 1.96
CSPG5-203ENST00000456150 INO80Q9ULG1 1556 aaPredicted RBP27.29■■□□□ 1.96
CSPG5-203ENST00000456150 IRX6P78412 446 aaPredicted RBP27.28■■□□□ 1.96
CSPG5-203ENST00000456150 ATP7AQ04656 1500 aa27.27■■□□□ 1.96
CSPG5-203ENST00000456150 NEO1Q92859 1461 aa27.27■■□□□ 1.96
CSPG5-203ENST00000456150 PRDM15P57071 1507 aaPredicted RBP27.25■■□□□ 1.95
CSPG5-203ENST00000456150 RGL3Q3MIN7 710 aa27.25■■□□□ 1.95
CSPG5-203ENST00000456150 ZNF518AQ6AHZ1 1483 aa27.25■■□□□ 1.95
CSPG5-203ENST00000456150 POGZQ7Z3K3 1410 aa27.25■■□□□ 1.95
CSPG5-203ENST00000456150 SMG6Q86US8 1419 aaKnown RBP27.25■■□□□ 1.95
CSPG5-203ENST00000456150 RALBP1Q15311 655 aa27.25■■□□□ 1.95
CSPG5-203ENST00000456150 PPP4R2Q9NY27 417 aa27.25■■□□□ 1.95
CSPG5-203ENST00000456150 MYT1LQ9UL68 1186 aa27.25■■□□□ 1.95
CSPG5-203ENST00000456150 CNGB1Q14028 1251 aaPredicted RBP27.24■■□□□ 1.95
CSPG5-203ENST00000456150 TMC1Q8TDI8 760 aa27.23■■□□□ 1.95
CSPG5-203ENST00000456150 TSPOAP1O95153 1857 aa27.23■■□□□ 1.95
CSPG5-203ENST00000456150 BRD4O60885 1362 aaPredicted RBP27.22■■□□□ 1.95
CSPG5-203ENST00000456150 MYBBP1AQ9BQG0 1328 aaKnown RBP27.22■■□□□ 1.95
CSPG5-203ENST00000456150 RAPGEF3O95398 923 aa27.21■■□□□ 1.95
CSPG5-203ENST00000456150 PNISRQ8TF01 805 aaKnown RBP27.21■■□□□ 1.95
CSPG5-203ENST00000456150 KIDINS220Q9ULH0 1771 aa27.21■■□□□ 1.95
CSPG5-203ENST00000456150 PPRC1Q5VV67 1664 aaKnown RBP27.2■■□□□ 1.94
CSPG5-203ENST00000456150 KIF13AQ9H1H9 1805 aa27.19■■□□□ 1.94
CSPG5-203ENST00000456150 COL17A1Q9UMD9 1497 aaPredicted RBP27.18■■□□□ 1.94
CSPG5-203ENST00000456150 RBM19Q9Y4C8 960 aaKnown RBP27.18■■□□□ 1.94
CSPG5-203ENST00000456150 NBPF1Q3BBV0 1214 aa27.17■■□□□ 1.94
CSPG5-203ENST00000456150 RNF17Q9BXT8 1623 aaKnown RBP27.16■■□□□ 1.94
CSPG5-203ENST00000456150 NUDCQ9Y266 331 aa27.15■■□□□ 1.94
CSPG5-203ENST00000456150 LRPPRCP42704 1394 aaKnown RBP27.15■■□□□ 1.94
CSPG5-203ENST00000456150 DEPDC5O75140 1603 aa27.13■■□□□ 1.93
CSPG5-203ENST00000456150 HECW2Q9P2P5 1572 aa27.12■■□□□ 1.93
CSPG5-203ENST00000456150 RICTORQ6R327 1708 aa27.12■■□□□ 1.93
CSPG5-203ENST00000456150 MLH3Q9UHC1 1453 aa27.11■■□□□ 1.93
CSPG5-203ENST00000456150 TRPM2O94759 1503 aa27.11■■□□□ 1.93
CSPG5-203ENST00000456150 PARD3Q8TEW0 1356 aa27.1■■□□□ 1.93
CSPG5-203ENST00000456150 SPHKAPQ2M3C7 1700 aa27.1■■□□□ 1.93
CSPG5-203ENST00000456150 CEP152O94986 1710 aa27.1■■□□□ 1.93
CSPG5-203ENST00000456150 WASHC2CQ9Y4E1 1318 aa27.09■■□□□ 1.93
CSPG5-203ENST00000456150 TESK2Q96S53 571 aa27.08■■□□□ 1.93
CSPG5-203ENST00000456150 FRMPD1Q5SYB0 1578 aa27.07■■□□□ 1.92
CSPG5-203ENST00000456150 TET3O43151 1660 aa27.07■■□□□ 1.92
CSPG5-203ENST00000456150 NLRP13Q86W25 1043 aa27.07■■□□□ 1.92
CSPG5-203ENST00000456150 ABCA6Q8N139 1617 aa27.06■■□□□ 1.92
CSPG5-203ENST00000456150 MADDQ8WXG6 1647 aa27.06■■□□□ 1.92
CSPG5-203ENST00000456150 DISP3Q9P2K9 1392 aa27.06■■□□□ 1.92
CSPG5-203ENST00000456150 TMF1P82094 1093 aa27.05■■□□□ 1.92
CSPG5-203ENST00000456150 RNF123Q5XPI4 1314 aa27.04■■□□□ 1.92
CSPG5-203ENST00000456150 KIF3BO15066 747 aa27.04■■□□□ 1.92
CSPG5-203ENST00000456150 STAC3Q96MF2 364 aa27.04■■□□□ 1.92
CSPG5-203ENST00000456150 PTPRTO14522 1441 aa27.04■■□□□ 1.92
CSPG5-203ENST00000456150 PER1O15534 1290 aaPredicted RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms