RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 DISP3Q9P2K9 1392 aa26.64■■□□□ 1.86
TVP23A-202ENST00000456096 TSPY4P0CV99 314 aa26.63■■□□□ 1.85
TVP23A-202ENST00000456096 TSPY10P0CW01 314 aa26.63■■□□□ 1.85
TVP23A-202ENST00000456096 DNMT1P26358 1616 aaKnown RBP26.63■■□□□ 1.85
TVP23A-202ENST00000456096 WASHC2CQ9Y4E1 1318 aa26.63■■□□□ 1.85
TVP23A-202ENST00000456096 ARHGEF5Q12774 1597 aa26.63■■□□□ 1.85
TVP23A-202ENST00000456096 LRRC9Q6ZRR7 1453 aa26.62■■□□□ 1.85
TVP23A-202ENST00000456096 TNRQ92752 1358 aa26.61■■□□□ 1.85
TVP23A-202ENST00000456096 KDM5DQ9BY66 1539 aa26.61■■□□□ 1.85
TVP23A-202ENST00000456096 VPS8Q8N3P4 1428 aa26.61■■□□□ 1.85
TVP23A-202ENST00000456096 PZPP20742 1482 aa26.6■■□□□ 1.85
TVP23A-202ENST00000456096 FAM135AQ9P2D6 1515 aa26.59■■□□□ 1.85
TVP23A-202ENST00000456096 UBAP1LF5GYI3 381 aa26.55■■□□□ 1.84
TVP23A-202ENST00000456096 KANK4Q5T7N3 995 aaPredicted RBP26.55■■□□□ 1.84
TVP23A-202ENST00000456096 ILDR2Q71H61 639 aa26.55■■□□□ 1.84
TVP23A-202ENST00000456096 MIA2Q96PC5 1412 aa26.51■■□□□ 1.83
TVP23A-202ENST00000456096 POLR1AO95602 1720 aaPredicted RBP26.51■■□□□ 1.83
TVP23A-202ENST00000456096 NEURL4Q96JN8 1562 aa26.5■■□□□ 1.83
TVP23A-202ENST00000456096 MAST1Q9Y2H9 1570 aa26.5■■□□□ 1.83
TVP23A-202ENST00000456096 MAP3K1Q13233 1512 aa26.49■■□□□ 1.83
TVP23A-202ENST00000456096 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.48■■□□□ 1.83
TVP23A-202ENST00000456096 THEMISQ8N1K5 641 aaPredicted RBP26.48■■□□□ 1.83
TVP23A-202ENST00000456096 SPATA31D1Q6ZQQ2 1576 aa26.48■■□□□ 1.83
TVP23A-202ENST00000456096 RNF17Q9BXT8 1623 aaKnown RBP26.47■■□□□ 1.83
TVP23A-202ENST00000456096 ANKLE2Q86XL3 938 aa26.47■■□□□ 1.83
TVP23A-202ENST00000456096 NLRP1Q9C000 1473 aa26.47■■□□□ 1.83
TVP23A-202ENST00000456096 MYOM3Q5VTT5 1437 aa26.46■■□□□ 1.83
TVP23A-202ENST00000456096 ABCC3O15438 1527 aa26.44■■□□□ 1.82
TVP23A-202ENST00000456096 UGGT1Q9NYU2 1555 aa26.44■■□□□ 1.82
TVP23A-202ENST00000456096 SHANK2Q9UPX8 1470 aa26.42■■□□□ 1.82
TVP23A-202ENST00000456096 EIF2AK4Q9P2K8 1649 aaKnown RBP26.41■■□□□ 1.82
TVP23A-202ENST00000456096 ZC3H13Q5T200 1668 aaKnown RBP26.4■■□□□ 1.82
TVP23A-202ENST00000456096 CPS1P31327 1500 aa26.39■■□□□ 1.82
TVP23A-202ENST00000456096 SOCS7O14512 581 aa26.38■■□□□ 1.81
TVP23A-202ENST00000456096 MROH1Q8NDA8 1641 aa26.38■■□□□ 1.81
TVP23A-202ENST00000456096 NPHP4O75161 1426 aaPredicted RBP26.37■■□□□ 1.81
TVP23A-202ENST00000456096 MED14O60244 1454 aa26.36■■□□□ 1.81
TVP23A-202ENST00000456096 DEPDC5O75140 1603 aa26.36■■□□□ 1.81
TVP23A-202ENST00000456096 VWDEQ8N2E2 1590 aa26.36■■□□□ 1.81
TVP23A-202ENST00000456096 ERVK-7P63135 1459 aa26.36■■□□□ 1.81
TVP23A-202ENST00000456096 CFAP65Q6ZU64 1925 aaKnown RBP26.35■■□□□ 1.81
TVP23A-202ENST00000456096 DUOX2Q9NRD8 1548 aa26.35■■□□□ 1.81
TVP23A-202ENST00000456096 CEP152O94986 1710 aa26.34■■□□□ 1.81
TVP23A-202ENST00000456096 SCAF1Q9H7N4 1312 aaKnown RBP26.34■■□□□ 1.81
TVP23A-202ENST00000456096 TOM1O60784 492 aa26.33■■□□□ 1.81
TVP23A-202ENST00000456096 PIP4K2BP78356 416 aa26.33■■□□□ 1.81
TVP23A-202ENST00000456096 IQGAP1P46940 1657 aa26.31■■□□□ 1.8
TVP23A-202ENST00000456096 KIF15Q9NS87 1388 aa26.31■■□□□ 1.8
TVP23A-202ENST00000456096 ABCC5O15440 1437 aa26.31■■□□□ 1.8
TVP23A-202ENST00000456096 APLP2Q06481 763 aa26.3■■□□□ 1.8
TVP23A-202ENST00000456096 RRP7BPQ9NSQ0 103 aa26.3■■□□□ 1.8
TVP23A-202ENST00000456096 HSPA1LP34931 641 aa26.29■■□□□ 1.8
TVP23A-202ENST00000456096 PTPN23Q9H3S7 1636 aa26.28■■□□□ 1.8
TVP23A-202ENST00000456096 CROCC2H7BZ55 1655 aa26.27■■□□□ 1.8
TVP23A-202ENST00000456096 UBR1Q8IWV7 1749 aa26.25■■□□□ 1.79
TVP23A-202ENST00000456096 ERBINQ96RT1 1412 aa26.24■■□□□ 1.79
TVP23A-202ENST00000456096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.24■■□□□ 1.79
TVP23A-202ENST00000456096 PRDM15P57071 1507 aaPredicted RBP26.24■■□□□ 1.79
TVP23A-202ENST00000456096 STRCP1A6NGW2 1772 aa26.23■■□□□ 1.79
TVP23A-202ENST00000456096 DAPK1P53355 1430 aa26.22■■□□□ 1.79
TVP23A-202ENST00000456096 ARHGAP31Q2M1Z3 1444 aa26.22■■□□□ 1.79
TVP23A-202ENST00000456096 FGD6Q6ZV73 1430 aa26.21■■□□□ 1.79
TVP23A-202ENST00000456096 SCAF11Q99590 1463 aaKnown RBP26.19■■□□□ 1.78
TVP23A-202ENST00000456096 ALKQ9UM73 1620 aa26.19■■□□□ 1.78
TVP23A-202ENST00000456096 LTKP29376 864 aa26.19■■□□□ 1.78
TVP23A-202ENST00000456096 CHIC2Q9UKJ5 165 aa26.19■■□□□ 1.78
TVP23A-202ENST00000456096 LRRC7Q96NW7 1537 aa26.19■■□□□ 1.78
TVP23A-202ENST00000456096 TXNDC2Q86VQ3 553 aa26.18■■□□□ 1.78
TVP23A-202ENST00000456096 ARHGAP23Q9P227 1491 aa26.17■■□□□ 1.78
TVP23A-202ENST00000456096 KANK1Q14678 1352 aa26.16■■□□□ 1.78
TVP23A-202ENST00000456096 SLIT1O75093 1534 aa26.15■■□□□ 1.78
TVP23A-202ENST00000456096 ANKRD30AQ9BXX3 1397 aa26.14■■□□□ 1.78
TVP23A-202ENST00000456096 SYNMO15061 1565 aa26.12■■□□□ 1.77
TVP23A-202ENST00000456096 EID1Q9Y6B2 187 aa26.12■■□□□ 1.77
TVP23A-202ENST00000456096 PIK3C2BO00750 1634 aa26.12■■□□□ 1.77
TVP23A-202ENST00000456096 MED1Q15648 1581 aaPredicted RBP26.12■■□□□ 1.77
TVP23A-202ENST00000456096 STAG3Q9UJ98 1225 aa26.09■■□□□ 1.77
TVP23A-202ENST00000456096 IDI1Q13907 227 aa26.08■■□□□ 1.77
TVP23A-202ENST00000456096 SENP3Q9H4L4 574 aaPredicted RBP26.08■■□□□ 1.77
TVP23A-202ENST00000456096 LMTK2Q8IWU2 1503 aa26.08■■□□□ 1.77
TVP23A-202ENST00000456096 TMEM2Q9UHN6 1383 aa26.07■■□□□ 1.76
TVP23A-202ENST00000456096 EFCAB6Q5THR3 1501 aa26.04■■□□□ 1.76
TVP23A-202ENST00000456096 FAM50AQ14320 339 aaKnown RBP26.03■■□□□ 1.76
TVP23A-202ENST00000456096 ADGRL2O95490 1459 aa26.02■■□□□ 1.76
TVP23A-202ENST00000456096 KDM5AP29375 1690 aaKnown RBP26.02■■□□□ 1.76
TVP23A-202ENST00000456096 XIRP1Q702N8 1843 aaKnown RBP26.01■■□□□ 1.75
TVP23A-202ENST00000456096 NOS1P29475 1434 aa26■■□□□ 1.75
TVP23A-202ENST00000456096 SLC26A8Q96RN1 970 aa25.96■■□□□ 1.75
TVP23A-202ENST00000456096 PHF23Q9BUL5 403 aaPredicted RBP25.96■■□□□ 1.75
TVP23A-202ENST00000456096 SLC52A1Q9NWF4 448 aa25.96■■□□□ 1.75
TVP23A-202ENST00000456096 ANKRD50Q9ULJ7 1429 aa25.96■■□□□ 1.75
TVP23A-202ENST00000456096 TET3O43151 1660 aa25.94■■□□□ 1.74
TVP23A-202ENST00000456096 ADGRB3O60242 1522 aa25.93■■□□□ 1.74
TVP23A-202ENST00000456096 KCNA6P17658 529 aa25.93■■□□□ 1.74
TVP23A-202ENST00000456096 TMEM94Q12767 1356 aa25.92■■□□□ 1.74
TVP23A-202ENST00000456096 PROSER2Q86WR7 435 aaPredicted RBP25.89■■□□□ 1.74
TVP23A-202ENST00000456096 RBM33Q96EV2 1170 aaKnown RBP25.89■■□□□ 1.74
TVP23A-202ENST00000456096 RPRD2Q5VT52 1461 aaKnown RBP25.89■■□□□ 1.73
TVP23A-202ENST00000456096 BCANQ96GW7 911 aa25.88■■□□□ 1.73
TVP23A-202ENST00000456096 FAM135BQ49AJ0 1406 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms