RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 WASHC2CQ9Y4E1 1318 aa27.54■■■□□ 2
COL13A1-206ENST00000456019 STRCQ7RTU9 1775 aa27.53■■■□□ 2
COL13A1-206ENST00000456019 CROCC2H7BZ55 1655 aa27.52■■■□□ 2
COL13A1-206ENST00000456019 EIF2AK4Q9P2K8 1649 aaKnown RBP27.52■■■□□ 2
COL13A1-206ENST00000456019 DUOX2Q9NRD8 1548 aa27.51■■□□□ 1.99
COL13A1-206ENST00000456019 DAPK1P53355 1430 aa27.5■■□□□ 1.99
COL13A1-206ENST00000456019 DNMT1P26358 1616 aaKnown RBP27.5■■□□□ 1.99
COL13A1-206ENST00000456019 MYO3AQ8NEV4 1616 aa27.5■■□□□ 1.99
COL13A1-206ENST00000456019 RNF17Q9BXT8 1623 aaKnown RBP27.5■■□□□ 1.99
COL13A1-206ENST00000456019 KIF15Q9NS87 1388 aa27.48■■□□□ 1.99
COL13A1-206ENST00000456019 PZPP20742 1482 aa27.47■■□□□ 1.99
COL13A1-206ENST00000456019 NCOA1Q15788 1441 aa27.47■■□□□ 1.99
COL13A1-206ENST00000456019 ZNF142P52746 1687 aaPredicted RBP27.46■■□□□ 1.99
COL13A1-206ENST00000456019 CEP170BQ9Y4F5 1589 aaPredicted RBP27.45■■□□□ 1.99
COL13A1-206ENST00000456019 CAMSAP1Q5T5Y3 1602 aa27.45■■□□□ 1.98
COL13A1-206ENST00000456019 PTPRTO14522 1441 aa27.44■■□□□ 1.98
COL13A1-206ENST00000456019 FBXO41Q8TF61 875 aa27.43■■□□□ 1.98
COL13A1-206ENST00000456019 RRP7BPQ9NSQ0 103 aa27.43■■□□□ 1.98
COL13A1-206ENST00000456019 FBXO31Q5XUX0 539 aaPredicted RBP27.42■■□□□ 1.98
COL13A1-206ENST00000456019 ZC3H13Q5T200 1668 aaKnown RBP27.42■■□□□ 1.98
COL13A1-206ENST00000456019 ERBINQ96RT1 1412 aa27.41■■□□□ 1.98
COL13A1-206ENST00000456019 TNRQ92752 1358 aa27.41■■□□□ 1.98
COL13A1-206ENST00000456019 ABCC3O15438 1527 aa27.41■■□□□ 1.98
COL13A1-206ENST00000456019 ANKRD30AQ9BXX3 1397 aa27.4■■□□□ 1.98
COL13A1-206ENST00000456019 MROH1Q8NDA8 1641 aa27.4■■□□□ 1.98
COL13A1-206ENST00000456019 A2ML1A8K2U0 1454 aa27.39■■□□□ 1.98
COL13A1-206ENST00000456019 FAM50AQ14320 339 aaKnown RBP27.38■■□□□ 1.97
COL13A1-206ENST00000456019 CHIC2Q9UKJ5 165 aa27.38■■□□□ 1.97
COL13A1-206ENST00000456019 PLA2R1Q13018 1463 aa27.38■■□□□ 1.97
COL13A1-206ENST00000456019 CERKQ8TCT0 537 aa27.36■■□□□ 1.97
COL13A1-206ENST00000456019 PKD2Q13563 968 aa27.34■■□□□ 1.97
COL13A1-206ENST00000456019 PRDM15P57071 1507 aaPredicted RBP27.33■■□□□ 1.97
COL13A1-206ENST00000456019 NCKAP5LQ9HCH0 1330 aa27.33■■□□□ 1.97
COL13A1-206ENST00000456019 ADGRL2O95490 1459 aa27.32■■□□□ 1.96
COL13A1-206ENST00000456019 NLRP1Q9C000 1473 aa27.31■■□□□ 1.96
COL13A1-206ENST00000456019 CEP152O94986 1710 aa27.3■■□□□ 1.96
COL13A1-206ENST00000456019 SPATA31D1Q6ZQQ2 1576 aa27.29■■□□□ 1.96
COL13A1-206ENST00000456019 DEPDC5O75140 1603 aa27.28■■□□□ 1.96
COL13A1-206ENST00000456019 KANK1Q14678 1352 aa27.27■■□□□ 1.96
COL13A1-206ENST00000456019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.27■■□□□ 1.96
COL13A1-206ENST00000456019 ERVK-7P63135 1459 aa27.26■■□□□ 1.95
COL13A1-206ENST00000456019 ARHGAP31Q2M1Z3 1444 aa27.24■■□□□ 1.95
COL13A1-206ENST00000456019 UGGT1Q9NYU2 1555 aa27.23■■□□□ 1.95
COL13A1-206ENST00000456019 THEMISQ8N1K5 641 aaPredicted RBP27.23■■□□□ 1.95
COL13A1-206ENST00000456019 PPARGC1BQ86YN6 1023 aaKnown RBP27.21■■□□□ 1.95
COL13A1-206ENST00000456019 SENP3Q9H4L4 574 aaPredicted RBP27.21■■□□□ 1.95
COL13A1-206ENST00000456019 ANKRD50Q9ULJ7 1429 aa27.19■■□□□ 1.94
COL13A1-206ENST00000456019 LTBP4Q8N2S1 1624 aa27.19■■□□□ 1.94
COL13A1-206ENST00000456019 VWDEQ8N2E2 1590 aa27.18■■□□□ 1.94
COL13A1-206ENST00000456019 LMTK2Q8IWU2 1503 aa27.18■■□□□ 1.94
COL13A1-206ENST00000456019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.18■■□□□ 1.94
COL13A1-206ENST00000456019 ANKLE2Q86XL3 938 aa27.17■■□□□ 1.94
COL13A1-206ENST00000456019 POLR1AO95602 1720 aaPredicted RBP27.16■■□□□ 1.94
COL13A1-206ENST00000456019 ROCK1Q13464 1354 aa27.14■■□□□ 1.94
COL13A1-206ENST00000456019 NEURL4Q96JN8 1562 aa27.14■■□□□ 1.93
COL13A1-206ENST00000456019 CFAP65Q6ZU64 1925 aaKnown RBP27.13■■□□□ 1.93
COL13A1-206ENST00000456019 ZNF335Q9H4Z2 1342 aaPredicted RBP27.13■■□□□ 1.93
COL13A1-206ENST00000456019 IQSEC2Q5JU85 1478 aa27.1■■□□□ 1.93
COL13A1-206ENST00000456019 EFCAB6Q5THR3 1501 aa27.09■■□□□ 1.93
COL13A1-206ENST00000456019 UBR1Q8IWV7 1749 aa27.07■■□□□ 1.92
COL13A1-206ENST00000456019 MED14O60244 1454 aa27.07■■□□□ 1.92
COL13A1-206ENST00000456019 ITGAEP38570 1179 aa27.07■■□□□ 1.92
COL13A1-206ENST00000456019 NPHP4O75161 1426 aaPredicted RBP27.06■■□□□ 1.92
COL13A1-206ENST00000456019 UNC13BO14795 1591 aa27.02■■□□□ 1.92
COL13A1-206ENST00000456019 RPRD2Q5VT52 1461 aaKnown RBP27.01■■□□□ 1.91
COL13A1-206ENST00000456019 NOS1P29475 1434 aa27.01■■□□□ 1.91
COL13A1-206ENST00000456019 RRBP1Q9P2E9 1410 aaKnown RBP27.01■■□□□ 1.91
COL13A1-206ENST00000456019 PIK3C2BO00750 1634 aa27.01■■□□□ 1.91
COL13A1-206ENST00000456019 SLIT1O75093 1534 aa27■■□□□ 1.91
COL13A1-206ENST00000456019 TET3O43151 1660 aa26.99■■□□□ 1.91
COL13A1-206ENST00000456019 IQGAP1P46940 1657 aa26.99■■□□□ 1.91
COL13A1-206ENST00000456019 STAG3Q9UJ98 1225 aa26.99■■□□□ 1.91
COL13A1-206ENST00000456019 SYNMO15061 1565 aa26.99■■□□□ 1.91
COL13A1-206ENST00000456019 ARHGAP23Q9P227 1491 aa26.99■■□□□ 1.91
COL13A1-206ENST00000456019 IDI1Q13907 227 aa26.98■■□□□ 1.91
COL13A1-206ENST00000456019 SCAF11Q99590 1463 aaKnown RBP26.98■■□□□ 1.91
COL13A1-206ENST00000456019 KDM5AP29375 1690 aaKnown RBP26.97■■□□□ 1.91
COL13A1-206ENST00000456019 CPS1P31327 1500 aa26.95■■□□□ 1.91
COL13A1-206ENST00000456019 TXNDC2Q86VQ3 553 aa26.95■■□□□ 1.9
COL13A1-206ENST00000456019 SLC52A1Q9NWF4 448 aa26.95■■□□□ 1.9
COL13A1-206ENST00000456019 EID1Q9Y6B2 187 aa26.95■■□□□ 1.9
COL13A1-206ENST00000456019 GCC2Q8IWJ2 1684 aa26.94■■□□□ 1.9
COL13A1-206ENST00000456019 TMEM2Q9UHN6 1383 aa26.94■■□□□ 1.9
COL13A1-206ENST00000456019 LTKP29376 864 aa26.93■■□□□ 1.9
COL13A1-206ENST00000456019 IQGAP3Q86VI3 1631 aa26.92■■□□□ 1.9
COL13A1-206ENST00000456019 NUP155O75694 1391 aa26.9■■□□□ 1.9
COL13A1-206ENST00000456019 ADGRB3O60242 1522 aa26.9■■□□□ 1.9
COL13A1-206ENST00000456019 UBAP1LF5GYI3 381 aa26.87■■□□□ 1.89
COL13A1-206ENST00000456019 E9PCH4 1651 aa26.86■■□□□ 1.89
COL13A1-206ENST00000456019 NAIPQ13075 1403 aa26.8■■□□□ 1.88
COL13A1-206ENST00000456019 PHF23Q9BUL5 403 aaPredicted RBP26.78■■□□□ 1.88
COL13A1-206ENST00000456019 STRCP1A6NGW2 1772 aa26.78■■□□□ 1.88
COL13A1-206ENST00000456019 TMEM131LA2VDJ0 1609 aa26.77■■□□□ 1.88
COL13A1-206ENST00000456019 TOM1O60784 492 aa26.76■■□□□ 1.87
COL13A1-206ENST00000456019 LRRC7Q96NW7 1537 aa26.75■■□□□ 1.87
COL13A1-206ENST00000456019 HDGFP51858 240 aaKnown RBP26.75■■□□□ 1.87
COL13A1-206ENST00000456019 CHGAP10645 457 aaKnown RBP26.74■■□□□ 1.87
COL13A1-206ENST00000456019 HFM1A2PYH4 1435 aa26.73■■□□□ 1.87
COL13A1-206ENST00000456019 ZFYVE9O95405 1425 aa26.73■■□□□ 1.87
COL13A1-206ENST00000456019 RIMS2Q9UQ26 1411 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms