RNA–Protein interactions for RNA: ENST00000455279.6

CCHCR1-209, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 676 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-209ENST00000455279 DNMT1P26358 1616 aaKnown RBP31.75■■■□□ 2.67
CCHCR1-209ENST00000455279 FBXO31Q5XUX0 539 aaPredicted RBP31.75■■■□□ 2.67
CCHCR1-209ENST00000455279 KDM5DQ9BY66 1539 aa31.75■■■□□ 2.67
CCHCR1-209ENST00000455279 MROH1Q8NDA8 1641 aa31.74■■■□□ 2.67
CCHCR1-209ENST00000455279 RNF17Q9BXT8 1623 aaKnown RBP31.73■■■□□ 2.67
CCHCR1-209ENST00000455279 SHANK2Q9UPX8 1470 aa31.72■■■□□ 2.67
CCHCR1-209ENST00000455279 PPARGC1BQ86YN6 1023 aaKnown RBP31.69■■■□□ 2.66
CCHCR1-209ENST00000455279 RRP7BPQ9NSQ0 103 aa31.69■■■□□ 2.66
CCHCR1-209ENST00000455279 CHIC2Q9UKJ5 165 aa31.69■■■□□ 2.66
CCHCR1-209ENST00000455279 WASHC2CQ9Y4E1 1318 aa31.69■■■□□ 2.66
CCHCR1-209ENST00000455279 KIF15Q9NS87 1388 aa31.68■■■□□ 2.66
CCHCR1-209ENST00000455279 CAMSAP1Q5T5Y3 1602 aa31.68■■■□□ 2.66
CCHCR1-209ENST00000455279 EIF2AK4Q9P2K8 1649 aaKnown RBP31.67■■■□□ 2.66
CCHCR1-209ENST00000455279 ZNF142P52746 1687 aaPredicted RBP31.67■■■□□ 2.66
CCHCR1-209ENST00000455279 DUOX2Q9NRD8 1548 aa31.67■■■□□ 2.66
CCHCR1-209ENST00000455279 CEP170BQ9Y4F5 1589 aaPredicted RBP31.67■■■□□ 2.66
CCHCR1-209ENST00000455279 NCOA1Q15788 1441 aa31.66■■■□□ 2.66
CCHCR1-209ENST00000455279 PZPP20742 1482 aa31.65■■■□□ 2.66
CCHCR1-209ENST00000455279 ABCC3O15438 1527 aa31.65■■■□□ 2.66
CCHCR1-209ENST00000455279 FAM135AQ9P2D6 1515 aa31.63■■■□□ 2.65
CCHCR1-209ENST00000455279 CEP152O94986 1710 aa31.63■■■□□ 2.65
CCHCR1-209ENST00000455279 FAM50AQ14320 339 aaKnown RBP31.61■■■□□ 2.65
CCHCR1-209ENST00000455279 NCKAP5LQ9HCH0 1330 aa31.6■■■□□ 2.65
CCHCR1-209ENST00000455279 TNRQ92752 1358 aa31.59■■■□□ 2.65
CCHCR1-209ENST00000455279 A2ML1A8K2U0 1454 aa31.56■■■□□ 2.64
CCHCR1-209ENST00000455279 PTPRTO14522 1441 aa31.55■■■□□ 2.64
CCHCR1-209ENST00000455279 ERBINQ96RT1 1412 aa31.55■■■□□ 2.64
CCHCR1-209ENST00000455279 ZC3H13Q5T200 1668 aaKnown RBP31.54■■■□□ 2.64
CCHCR1-209ENST00000455279 FBXO41Q8TF61 875 aa31.53■■■□□ 2.64
CCHCR1-209ENST00000455279 PRDM15P57071 1507 aaPredicted RBP31.53■■■□□ 2.64
CCHCR1-209ENST00000455279 CFAP65Q6ZU64 1925 aaKnown RBP31.53■■■□□ 2.64
CCHCR1-209ENST00000455279 CERKQ8TCT0 537 aa31.51■■■□□ 2.63
CCHCR1-209ENST00000455279 ANKRD30AQ9BXX3 1397 aa31.51■■■□□ 2.63
CCHCR1-209ENST00000455279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.5■■■□□ 2.63
CCHCR1-209ENST00000455279 DMRT2Q9Y5R5 561 aa31.5■■■□□ 2.63
CCHCR1-209ENST00000455279 ADGRL2O95490 1459 aa31.5■■■□□ 2.63
CCHCR1-209ENST00000455279 DEPDC5O75140 1603 aa31.49■■■□□ 2.63
CCHCR1-209ENST00000455279 PLA2R1Q13018 1463 aa31.49■■■□□ 2.63
CCHCR1-209ENST00000455279 SPATA31D1Q6ZQQ2 1576 aa31.48■■■□□ 2.63
CCHCR1-209ENST00000455279 ERVK-7P63135 1459 aa31.47■■■□□ 2.63
CCHCR1-209ENST00000455279 LTBP4Q8N2S1 1624 aa31.43■■■□□ 2.62
CCHCR1-209ENST00000455279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.41■■■□□ 2.62
CCHCR1-209ENST00000455279 VWDEQ8N2E2 1590 aa31.4■■■□□ 2.62
CCHCR1-209ENST00000455279 NEURL4Q96JN8 1562 aa31.39■■■□□ 2.62
CCHCR1-209ENST00000455279 NLRP1Q9C000 1473 aa31.39■■■□□ 2.62
CCHCR1-209ENST00000455279 PKD2Q13563 968 aa31.38■■■□□ 2.61
CCHCR1-209ENST00000455279 UGGT1Q9NYU2 1555 aa31.38■■■□□ 2.61
CCHCR1-209ENST00000455279 ZNF335Q9H4Z2 1342 aaPredicted RBP31.37■■■□□ 2.61
CCHCR1-209ENST00000455279 POLR1AO95602 1720 aaPredicted RBP31.35■■■□□ 2.61
CCHCR1-209ENST00000455279 ARHGAP31Q2M1Z3 1444 aa31.34■■■□□ 2.61
CCHCR1-209ENST00000455279 ANKRD50Q9ULJ7 1429 aa31.34■■■□□ 2.61
CCHCR1-209ENST00000455279 ITGAEP38570 1179 aa31.34■■■□□ 2.61
CCHCR1-209ENST00000455279 LMTK2Q8IWU2 1503 aa31.32■■■□□ 2.6
CCHCR1-209ENST00000455279 KANK1Q14678 1352 aa31.3■■■□□ 2.6
CCHCR1-209ENST00000455279 UBR1Q8IWV7 1749 aa31.28■■■□□ 2.6
CCHCR1-209ENST00000455279 THEMISQ8N1K5 641 aaPredicted RBP31.26■■■□□ 2.59
CCHCR1-209ENST00000455279 EFCAB6Q5THR3 1501 aa31.24■■■□□ 2.59
CCHCR1-209ENST00000455279 SYNMO15061 1565 aa31.24■■■□□ 2.59
CCHCR1-209ENST00000455279 PIK3C2BO00750 1634 aa31.23■■■□□ 2.59
CCHCR1-209ENST00000455279 ROCK1Q13464 1354 aa31.22■■■□□ 2.59
CCHCR1-209ENST00000455279 ANKLE2Q86XL3 938 aa31.22■■■□□ 2.59
CCHCR1-209ENST00000455279 UNC13BO14795 1591 aa31.21■■■□□ 2.59
CCHCR1-209ENST00000455279 NPHP4O75161 1426 aaPredicted RBP31.19■■■□□ 2.58
CCHCR1-209ENST00000455279 NOS1P29475 1434 aa31.18■■■□□ 2.58
CCHCR1-209ENST00000455279 RRBP1Q9P2E9 1410 aaKnown RBP31.18■■■□□ 2.58
CCHCR1-209ENST00000455279 MED14O60244 1454 aa31.17■■■□□ 2.58
CCHCR1-209ENST00000455279 LTKP29376 864 aa31.15■■■□□ 2.58
CCHCR1-209ENST00000455279 IDI1Q13907 227 aa31.15■■■□□ 2.58
CCHCR1-209ENST00000455279 IQGAP1P46940 1657 aa31.14■■■□□ 2.58
CCHCR1-209ENST00000455279 ARHGAP23Q9P227 1491 aa31.14■■■□□ 2.57
CCHCR1-209ENST00000455279 TET3O43151 1660 aa31.13■■■□□ 2.57
CCHCR1-209ENST00000455279 SLIT1O75093 1534 aa31.11■■■□□ 2.57
CCHCR1-209ENST00000455279 STRCP1A6NGW2 1772 aa31.09■■■□□ 2.57
CCHCR1-209ENST00000455279 E9PCH4 1651 aa31.08■■■□□ 2.57
CCHCR1-209ENST00000455279 GCC2Q8IWJ2 1684 aa31.08■■■□□ 2.57
CCHCR1-209ENST00000455279 SCAF11Q99590 1463 aaKnown RBP31.08■■■□□ 2.57
CCHCR1-209ENST00000455279 IQSEC2Q5JU85 1478 aa31.07■■■□□ 2.56
CCHCR1-209ENST00000455279 IQGAP3Q86VI3 1631 aa31.06■■■□□ 2.56
CCHCR1-209ENST00000455279 TXNDC2Q86VQ3 553 aa31.05■■■□□ 2.56
CCHCR1-209ENST00000455279 TMEM2Q9UHN6 1383 aa31.04■■■□□ 2.56
CCHCR1-209ENST00000455279 RPRD2Q5VT52 1461 aaKnown RBP31.03■■■□□ 2.56
CCHCR1-209ENST00000455279 ADGRB3O60242 1522 aa31.03■■■□□ 2.56
CCHCR1-209ENST00000455279 MYO5BQ9ULV0 1848 aa31.02■■■□□ 2.56
CCHCR1-209ENST00000455279 NUP155O75694 1391 aa31.02■■■□□ 2.56
CCHCR1-209ENST00000455279 STAG3Q9UJ98 1225 aa31.01■■■□□ 2.55
CCHCR1-209ENST00000455279 KDM5AP29375 1690 aaKnown RBP30.99■■■□□ 2.55
CCHCR1-209ENST00000455279 NAIPQ13075 1403 aa30.98■■■□□ 2.55
CCHCR1-209ENST00000455279 SENP3Q9H4L4 574 aaPredicted RBP30.97■■■□□ 2.55
CCHCR1-209ENST00000455279 CPS1P31327 1500 aa30.97■■■□□ 2.55
CCHCR1-209ENST00000455279 UBAP1LF5GYI3 381 aa30.95■■■□□ 2.55
CCHCR1-209ENST00000455279 SLC52A1Q9NWF4 448 aa30.94■■■□□ 2.54
CCHCR1-209ENST00000455279 TMEM131LA2VDJ0 1609 aa30.92■■■□□ 2.54
CCHCR1-209ENST00000455279 EID1Q9Y6B2 187 aa30.91■■■□□ 2.54
CCHCR1-209ENST00000455279 LRRC7Q96NW7 1537 aa30.89■■■□□ 2.54
CCHCR1-209ENST00000455279 ALKQ9UM73 1620 aa30.89■■■□□ 2.54
CCHCR1-209ENST00000455279 ZFYVE9O95405 1425 aa30.88■■■□□ 2.53
CCHCR1-209ENST00000455279 CHGAP10645 457 aaKnown RBP30.85■■■□□ 2.53
CCHCR1-209ENST00000455279 SLC26A8Q96RN1 970 aa30.85■■■□□ 2.53
CCHCR1-209ENST00000455279 NUTM2DQ5VT03 806 aaPredicted RBP30.84■■■□□ 2.53
CCHCR1-209ENST00000455279 RIMS2Q9UQ26 1411 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms