RNA–Protein interactions for RNA: ENST00000455009.5

ARPC1B-212, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-212ENST00000455009 RNF17Q9BXT8 1623 aaKnown RBP30.81■■■□□ 2.52
ARPC1B-212ENST00000455009 RRP7BPQ9NSQ0 103 aa30.81■■■□□ 2.52
ARPC1B-212ENST00000455009 KDM5DQ9BY66 1539 aa30.81■■■□□ 2.52
ARPC1B-212ENST00000455009 CEBPAP49715 358 aaPredicted RBP30.8■■■□□ 2.52
ARPC1B-212ENST00000455009 CHIC2Q9UKJ5 165 aa30.8■■■□□ 2.52
ARPC1B-212ENST00000455009 NCOA1Q15788 1441 aa30.79■■■□□ 2.52
ARPC1B-212ENST00000455009 ZMYM3Q14202 1370 aa30.79■■■□□ 2.52
ARPC1B-212ENST00000455009 PREX1Q8TCU6 1659 aa30.78■■■□□ 2.52
ARPC1B-212ENST00000455009 LMTK3Q96Q04 1460 aa30.76■■■□□ 2.51
ARPC1B-212ENST00000455009 WASHC2CQ9Y4E1 1318 aa30.75■■■□□ 2.51
ARPC1B-212ENST00000455009 NPATQ14207 1427 aa30.75■■■□□ 2.51
ARPC1B-212ENST00000455009 RRBP1Q9P2E9 1410 aaKnown RBP30.75■■■□□ 2.51
ARPC1B-212ENST00000455009 ZC3H13Q5T200 1668 aaKnown RBP30.74■■■□□ 2.51
ARPC1B-212ENST00000455009 UHRF1BP1Q6BDS2 1440 aa30.72■■■□□ 2.51
ARPC1B-212ENST00000455009 SETD1BQ9UPS6 1966 aaKnown RBP30.72■■■□□ 2.51
ARPC1B-212ENST00000455009 ROCK1Q13464 1354 aa30.7■■■□□ 2.51
ARPC1B-212ENST00000455009 PRDM15P57071 1507 aaPredicted RBP30.68■■■□□ 2.5
ARPC1B-212ENST00000455009 DEPDC5O75140 1603 aa30.65■■■□□ 2.5
ARPC1B-212ENST00000455009 MROH1Q8NDA8 1641 aa30.65■■■□□ 2.5
ARPC1B-212ENST00000455009 KANK1Q14678 1352 aa30.65■■■□□ 2.5
ARPC1B-212ENST00000455009 PTPRKQ15262 1439 aa30.64■■■□□ 2.5
ARPC1B-212ENST00000455009 ANKRD50Q9ULJ7 1429 aa30.64■■■□□ 2.5
ARPC1B-212ENST00000455009 ABCC3O15438 1527 aa30.64■■■□□ 2.5
ARPC1B-212ENST00000455009 PZPP20742 1482 aa30.63■■■□□ 2.49
ARPC1B-212ENST00000455009 ITGAEP38570 1179 aa30.63■■■□□ 2.49
ARPC1B-212ENST00000455009 CEP152O94986 1710 aa30.56■■■□□ 2.48
ARPC1B-212ENST00000455009 CAMSAP1Q5T5Y3 1602 aa30.56■■■□□ 2.48
ARPC1B-212ENST00000455009 MYO3AQ8NEV4 1616 aa30.55■■■□□ 2.48
ARPC1B-212ENST00000455009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.55■■■□□ 2.483e-7■□□□□ 9.7
ARPC1B-212ENST00000455009 HSPA2P54652 639 aa30.53■■■□□ 2.48
ARPC1B-212ENST00000455009 TNRQ92752 1358 aa30.52■■■□□ 2.48
ARPC1B-212ENST00000455009 ZNF142P52746 1687 aaPredicted RBP30.51■■■□□ 2.47
ARPC1B-212ENST00000455009 LMTK2Q8IWU2 1503 aa30.51■■■□□ 2.47
ARPC1B-212ENST00000455009 VWDEQ8N2E2 1590 aa30.5■■■□□ 2.47
ARPC1B-212ENST00000455009 ARHGAP31Q2M1Z3 1444 aa30.5■■■□□ 2.47
ARPC1B-212ENST00000455009 CEP170BQ9Y4F5 1589 aaPredicted RBP30.48■■■□□ 2.47
ARPC1B-212ENST00000455009 UNC13BO14795 1591 aa30.46■■■□□ 2.47
ARPC1B-212ENST00000455009 FBXO31Q5XUX0 539 aaPredicted RBP30.46■■■□□ 2.47
ARPC1B-212ENST00000455009 SPATA31D1Q6ZQQ2 1576 aa30.45■■■□□ 2.47
ARPC1B-212ENST00000455009 NLRP1Q9C000 1473 aa30.44■■■□□ 2.46
ARPC1B-212ENST00000455009 A2ML1A8K2U0 1454 aa30.44■■■□□ 2.46
ARPC1B-212ENST00000455009 ERVK-7P63135 1459 aa30.44■■■□□ 2.46
ARPC1B-212ENST00000455009 EFCAB6Q5THR3 1501 aa30.4■■■□□ 2.46
ARPC1B-212ENST00000455009 DMRT2Q9Y5R5 561 aa30.39■■■□□ 2.46
ARPC1B-212ENST00000455009 GCC2Q8IWJ2 1684 aa30.39■■■□□ 2.45
ARPC1B-212ENST00000455009 TET3O43151 1660 aa30.36■■■□□ 2.45
ARPC1B-212ENST00000455009 HFM1A2PYH4 1435 aa30.36■■■□□ 2.45
ARPC1B-212ENST00000455009 PLA2R1Q13018 1463 aa30.36■■■□□ 2.45
ARPC1B-212ENST00000455009 RPRD2Q5VT52 1461 aaKnown RBP30.36■■■□□ 2.45
ARPC1B-212ENST00000455009 NAIPQ13075 1403 aa30.35■■■□□ 2.45
ARPC1B-212ENST00000455009 IQGAP3Q86VI3 1631 aa30.34■■■□□ 2.45
ARPC1B-212ENST00000455009 UGGT1Q9NYU2 1555 aa30.32■■■□□ 2.44
ARPC1B-212ENST00000455009 STRCQ7RTU9 1775 aa30.31■■■□□ 2.44
ARPC1B-212ENST00000455009 NUP155O75694 1391 aa30.31■■■□□ 2.44
ARPC1B-212ENST00000455009 THEMISQ8N1K5 641 aaPredicted RBP30.29■■■□□ 2.44
ARPC1B-212ENST00000455009 CFAP65Q6ZU64 1925 aaKnown RBP30.29■■■□□ 2.44
ARPC1B-212ENST00000455009 PKD2Q13563 968 aa30.28■■■□□ 2.44
ARPC1B-212ENST00000455009 PTPRTO14522 1441 aa30.25■■■□□ 2.43
ARPC1B-212ENST00000455009 NOS1P29475 1434 aa30.24■■■□□ 2.43
ARPC1B-212ENST00000455009 SLC52A1Q9NWF4 448 aa30.19■■■□□ 2.42
ARPC1B-212ENST00000455009 E9PCH4 1651 aa30.19■■■□□ 2.42
ARPC1B-212ENST00000455009 SYNMO15061 1565 aa30.19■■■□□ 2.42
ARPC1B-212ENST00000455009 UBR1Q8IWV7 1749 aa30.19■■■□□ 2.42
ARPC1B-212ENST00000455009 KDM5AP29375 1690 aaKnown RBP30.18■■■□□ 2.42
ARPC1B-212ENST00000455009 ACIN1Q9UKV3 1341 aaKnown RBP30.18■■■□□ 2.42
ARPC1B-212ENST00000455009 POLR1AO95602 1720 aaPredicted RBP30.17■■■□□ 2.42
ARPC1B-212ENST00000455009 STAG3Q9UJ98 1225 aa30.17■■■□□ 2.42
ARPC1B-212ENST00000455009 NCKAP5LQ9HCH0 1330 aa30.17■■■□□ 2.42
ARPC1B-212ENST00000455009 ANKLE2Q86XL3 938 aa30.16■■■□□ 2.42
ARPC1B-212ENST00000455009 PIK3C2BO00750 1634 aa30.15■■■□□ 2.42
ARPC1B-212ENST00000455009 TRIM52Q96A61 297 aa30.13■■■□□ 2.41
ARPC1B-212ENST00000455009 IDI1Q13907 227 aa30.11■■■□□ 2.41
ARPC1B-212ENST00000455009 ADGRB3O60242 1522 aa30.1■■■□□ 2.41
ARPC1B-212ENST00000455009 SLIT1O75093 1534 aa30.08■■■□□ 2.41
ARPC1B-212ENST00000455009 NEURL4Q96JN8 1562 aa30.06■■■□□ 2.4
ARPC1B-212ENST00000455009 MED14O60244 1454 aa30.06■■■□□ 2.4
ARPC1B-212ENST00000455009 ARHGAP23Q9P227 1491 aa30.06■■■□□ 2.4
ARPC1B-212ENST00000455009 SETD5Q9C0A6 1442 aa30.05■■■□□ 2.4
ARPC1B-212ENST00000455009 EID1Q9Y6B2 187 aa30.05■■■□□ 2.4
ARPC1B-212ENST00000455009 SPHKAPQ2M3C7 1700 aa30.04■■■□□ 2.4
ARPC1B-212ENST00000455009 TMEM2Q9UHN6 1383 aa30.03■■■□□ 2.4
ARPC1B-212ENST00000455009 SCAF11Q99590 1463 aaKnown RBP30.03■■■□□ 2.4
ARPC1B-212ENST00000455009 NPHP4O75161 1426 aaPredicted RBP30.03■■■□□ 2.4
ARPC1B-212ENST00000455009 SLC4A1APQ9BWU0 796 aaKnown RBP30.02■■■□□ 2.4
ARPC1B-212ENST00000455009 IQGAP1P46940 1657 aa30■■■□□ 2.39
ARPC1B-212ENST00000455009 TXNDC2Q86VQ3 553 aa29.98■■■□□ 2.39
ARPC1B-212ENST00000455009 TRPM2O94759 1503 aa29.96■■■□□ 2.39
ARPC1B-212ENST00000455009 TMEM131LA2VDJ0 1609 aa29.96■■■□□ 2.39
ARPC1B-212ENST00000455009 HDGFP51858 240 aaKnown RBP29.96■■■□□ 2.39
ARPC1B-212ENST00000455009 CHGAP10645 457 aaKnown RBP29.93■■■□□ 2.38
ARPC1B-212ENST00000455009 CERKQ8TCT0 537 aa29.92■■■□□ 2.38
ARPC1B-212ENST00000455009 RAB3GAP2Q9H2M9 1393 aa29.91■■■□□ 2.38
ARPC1B-212ENST00000455009 LTKP29376 864 aa29.9■■■□□ 2.38
ARPC1B-212ENST00000455009 LTBP4Q8N2S1 1624 aa29.89■■■□□ 2.37
ARPC1B-212ENST00000455009 MYO5BQ9ULV0 1848 aa29.88■■■□□ 2.37
ARPC1B-212ENST00000455009 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.88■■■□□ 2.37
ARPC1B-212ENST00000455009 MPHOSPH9Q99550 1183 aa29.88■■■□□ 2.37
ARPC1B-212ENST00000455009 ZNF335Q9H4Z2 1342 aaPredicted RBP29.88■■■□□ 2.37
ARPC1B-212ENST00000455009 RIMS2Q9UQ26 1411 aa29.87■■■□□ 2.37
ARPC1B-212ENST00000455009 ZFYVE9O95405 1425 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms