RNA–Protein interactions for RNA: ENST00000454947.1

SH3BP4-207, Transcript of SH3 domain binding protein 4, humanhuman

TSL 4

Gene SH3BP4, Length 500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-207ENST00000454947 PCGF6Q9BYE7 350 aa14.12□□□□□ -0.15
SH3BP4-207ENST00000454947 RAB3GAP2Q9H2M9 1393 aa14.11□□□□□ -0.15
SH3BP4-207ENST00000454947 VWDEQ8N2E2 1590 aa14.11□□□□□ -0.15
SH3BP4-207ENST00000454947 RRP7BPQ9NSQ0 103 aa14.11□□□□□ -0.15
SH3BP4-207ENST00000454947 ARID4BQ4LE39 1312 aaPredicted RBP14.1□□□□□ -0.15
SH3BP4-207ENST00000454947 FAM135AQ9P2D6 1515 aa14.09□□□□□ -0.15
SH3BP4-207ENST00000454947 IQGAP3Q86VI3 1631 aa14.06□□□□□ -0.16
SH3BP4-207ENST00000454947 LMTK2Q8IWU2 1503 aa14.05□□□□□ -0.16
SH3BP4-207ENST00000454947 ACIN1Q9UKV3 1341 aaKnown RBP14.05□□□□□ -0.16
SH3BP4-207ENST00000454947 PZPP20742 1482 aa14.05□□□□□ -0.16
SH3BP4-207ENST00000454947 ZC3H13Q5T200 1668 aaKnown RBP14.02□□□□□ -0.16
SH3BP4-207ENST00000454947 ABCC3O15438 1527 aa14.01□□□□□ -0.17
SH3BP4-207ENST00000454947 TET3O43151 1660 aa13.99□□□□□ -0.17
SH3BP4-207ENST00000454947 ESF1Q9H501 851 aaKnown RBP13.99□□□□□ -0.17
SH3BP4-207ENST00000454947 EFCAB6Q5THR3 1501 aa13.99□□□□□ -0.17
SH3BP4-207ENST00000454947 KIF3BO15066 747 aa13.98□□□□□ -0.17
SH3BP4-207ENST00000454947 MLECQ14165 292 aa13.98□□□□□ -0.17
SH3BP4-207ENST00000454947 DHX57Q6P158 1386 aaKnown RBP13.97□□□□□ -0.17
SH3BP4-207ENST00000454947 PPP6R1Q9UPN7 881 aa13.97□□□□□ -0.17
SH3BP4-207ENST00000454947 ADAMTSL3P82987 1691 aa13.97□□□□□ -0.17
SH3BP4-207ENST00000454947 NUP155O75694 1391 aa13.96□□□□□ -0.17
SH3BP4-207ENST00000454947 ARHGAP31Q2M1Z3 1444 aa13.96□□□□□ -0.18
SH3BP4-207ENST00000454947 FER1L4A9Z1Z3 1794 aa13.96□□□□□ -0.18
SH3BP4-207ENST00000454947 CAMSAP1Q5T5Y3 1602 aa13.95□□□□□ -0.18
SH3BP4-207ENST00000454947 CEP152O94986 1710 aa13.95□□□□□ -0.18
SH3BP4-207ENST00000454947 MROH2AA6NES4 1674 aa13.95□□□□□ -0.18
SH3BP4-207ENST00000454947 RPRD2Q5VT52 1461 aaKnown RBP13.94□□□□□ -0.18
SH3BP4-207ENST00000454947 MADDQ8WXG6 1647 aa13.93□□□□□ -0.18
SH3BP4-207ENST00000454947 CNTLNQ9NXG0 1405 aa13.93□□□□□ -0.18
SH3BP4-207ENST00000454947 GGT6Q6P531 493 aa13.93□□□□□ -0.18
SH3BP4-207ENST00000454947 E9PCH4 1651 aa13.93□□□□□ -0.18
SH3BP4-207ENST00000454947 KANK1Q14678 1352 aa13.93□□□□□ -0.18
SH3BP4-207ENST00000454947 NPATQ14207 1427 aa13.92□□□□□ -0.18
SH3BP4-207ENST00000454947 CLTCQ00610 1675 aaKnown RBP13.91□□□□□ -0.18
SH3BP4-207ENST00000454947 RIMS1Q86UR5 1692 aaKnown RBP13.91□□□□□ -0.18
SH3BP4-207ENST00000454947 PTPRTO14522 1441 aa13.9□□□□□ -0.18
SH3BP4-207ENST00000454947 MPHOSPH9Q99550 1183 aa13.9□□□□□ -0.18
SH3BP4-207ENST00000454947 PLA2R1Q13018 1463 aa13.89□□□□□ -0.19
SH3BP4-207ENST00000454947 KDM4FA0A1W2PPD8 638 aa13.88□□□□□ -0.19
SH3BP4-207ENST00000454947 TRPM2O94759 1503 aa13.88□□□□□ -0.19
SH3BP4-207ENST00000454947 NOS1P29475 1434 aa13.88□□□□□ -0.19
SH3BP4-207ENST00000454947 SPATA31D1Q6ZQQ2 1576 aa13.88□□□□□ -0.19
SH3BP4-207ENST00000454947 ANKRD30BQ9BXX2 1392 aa13.87□□□□□ -0.19
SH3BP4-207ENST00000454947 AEBP2Q6ZN18 517 aaPredicted RBP13.87□□□□□ -0.19
SH3BP4-207ENST00000454947 TRIM52Q96A61 297 aa13.87□□□□□ -0.19
SH3BP4-207ENST00000454947 SLC4A1APQ9BWU0 796 aaKnown RBP13.87□□□□□ -0.19
SH3BP4-207ENST00000454947 CLSPNQ9HAW4 1339 aa13.87□□□□□ -0.19
SH3BP4-207ENST00000454947 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
SH3BP4-207ENST00000454947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.86□□□□□ -0.19
SH3BP4-207ENST00000454947 SPHKAPQ2M3C7 1700 aa13.86□□□□□ -0.19
SH3BP4-207ENST00000454947 ERVK-7P63135 1459 aa13.86□□□□□ -0.19
SH3BP4-207ENST00000454947 PREX1Q8TCU6 1659 aa13.85□□□□□ -0.19
SH3BP4-207ENST00000454947 PIK3C2BO00750 1634 aa13.85□□□□□ -0.19
SH3BP4-207ENST00000454947 PTPRMP28827 1452 aa13.85□□□□□ -0.19
SH3BP4-207ENST00000454947 C3P01024 1663 aa13.85□□□□□ -0.19
SH3BP4-207ENST00000454947 SYNMO15061 1565 aa13.84□□□□□ -0.19
SH3BP4-207ENST00000454947 PKD2Q13563 968 aa13.84□□□□□ -0.19
SH3BP4-207ENST00000454947 ZMYM3Q14202 1370 aa13.83□□□□□ -0.19
SH3BP4-207ENST00000454947 PLPPR3Q6T4P5 718 aa13.83□□□□□ -0.2
SH3BP4-207ENST00000454947 NEURL4Q96JN8 1562 aa13.82□□□□□ -0.2
SH3BP4-207ENST00000454947 CLTCL1P53675 1640 aa13.8□□□□□ -0.2
SH3BP4-207ENST00000454947 FOXD1Q16676 465 aa13.78□□□□□ -0.2
SH3BP4-207ENST00000454947 UGGT1Q9NYU2 1555 aa13.78□□□□□ -0.2
SH3BP4-207ENST00000454947 ADGRB3O60242 1522 aa13.77□□□□□ -0.21
SH3BP4-207ENST00000454947 KDM5AP29375 1690 aaKnown RBP13.76□□□□□ -0.21
SH3BP4-207ENST00000454947 SPATA31E1Q6ZUB1 1445 aa13.76□□□□□ -0.21
SH3BP4-207ENST00000454947 CCDC144AA2RUR9 1427 aa13.75□□□□□ -0.21
SH3BP4-207ENST00000454947 CEBPAP49715 358 aaPredicted RBP13.75□□□□□ -0.21
SH3BP4-207ENST00000454947 SETD1BQ9UPS6 1966 aaKnown RBP13.74□□□□□ -0.21
SH3BP4-207ENST00000454947 NLRP1Q9C000 1473 aa13.74□□□□□ -0.21
SH3BP4-207ENST00000454947 TNRQ92752 1358 aa13.74□□□□□ -0.21
SH3BP4-207ENST00000454947 FBXO31Q5XUX0 539 aaPredicted RBP13.74□□□□□ -0.21
SH3BP4-207ENST00000454947 ZNF142P52746 1687 aaPredicted RBP13.74□□□□□ -0.21
SH3BP4-207ENST00000454947 MYO3AQ8NEV4 1616 aa13.74□□□□□ -0.21
SH3BP4-207ENST00000454947 CCER1Q8TC90 406 aaPredicted RBP13.73□□□□□ -0.21
SH3BP4-207ENST00000454947 CFAP65Q6ZU64 1925 aaKnown RBP13.72□□□□□ -0.21
SH3BP4-207ENST00000454947 TMEM131LA2VDJ0 1609 aa13.72□□□□□ -0.21
SH3BP4-207ENST00000454947 UHRF1BP1Q6BDS2 1440 aa13.72□□□□□ -0.21
SH3BP4-207ENST00000454947 SLC52A1Q9NWF4 448 aa13.71□□□□□ -0.21
SH3BP4-207ENST00000454947 CEP170BQ9Y4F5 1589 aaPredicted RBP13.69□□□□□ -0.22
SH3BP4-207ENST00000454947 UBR1Q8IWV7 1749 aa13.69□□□□□ -0.22
SH3BP4-207ENST00000454947 A2ML1A8K2U0 1454 aa13.68□□□□□ -0.22
SH3BP4-207ENST00000454947 IFT172Q9UG01 1749 aa13.68□□□□□ -0.22
SH3BP4-207ENST00000454947 IDI1Q13907 227 aa13.68□□□□□ -0.22
SH3BP4-207ENST00000454947 SIN3AQ96ST3 1273 aa13.68□□□□□ -0.22
SH3BP4-207ENST00000454947 KIF1BO60333 1816 aa13.68□□□□□ -0.22
SH3BP4-207ENST00000454947 NEXMIFQ5QGS0 1516 aa13.66□□□□□ -0.22
SH3BP4-207ENST00000454947 TIMELESSQ9UNS1 1208 aa13.66□□□□□ -0.22
SH3BP4-207ENST00000454947 ARHGAP23Q9P227 1491 aa13.66□□□□□ -0.22
SH3BP4-207ENST00000454947 ZFYVE9O95405 1425 aa13.65□□□□□ -0.22
SH3BP4-207ENST00000454947 SLIT1O75093 1534 aa13.65□□□□□ -0.22
SH3BP4-207ENST00000454947 MYOM2P54296 1465 aa13.65□□□□□ -0.22
SH3BP4-207ENST00000454947 NRXN1Q9ULB1 1477 aa13.65□□□□□ -0.22
SH3BP4-207ENST00000454947 STAG3Q9UJ98 1225 aa13.64□□□□□ -0.23
SH3BP4-207ENST00000454947 MYO5BQ9ULV0 1848 aa13.64□□□□□ -0.23
SH3BP4-207ENST00000454947 PPLO60437 1756 aa13.63□□□□□ -0.23
SH3BP4-207ENST00000454947 LMTK3Q96Q04 1460 aa13.62□□□□□ -0.23
SH3BP4-207ENST00000454947 TMEM2Q9UHN6 1383 aa13.6□□□□□ -0.23
SH3BP4-207ENST00000454947 RPGRIP1LQ68CZ1 1315 aa13.6□□□□□ -0.23
SH3BP4-207ENST00000454947 TONSLQ96HA7 1378 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms