RNA–Protein interactions for RNA: ENST00000454825.1

REXO4-204, Transcript of REX4 homolog, 3'-5' exonuclease, humanhuman

TSL 3

Gene REXO4, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REXO4-204ENST00000454825 SHANK2Q9UPX8 1470 aa38.26■■■■□ 3.72
REXO4-204ENST00000454825 RNF17Q9BXT8 1623 aaKnown RBP38.26■■■■□ 3.71
REXO4-204ENST00000454825 FAM135AQ9P2D6 1515 aa38.25■■■■□ 3.71
REXO4-204ENST00000454825 EIF2AK4Q9P2K8 1649 aaKnown RBP38.24■■■■□ 3.71
REXO4-204ENST00000454825 MYO3AQ8NEV4 1616 aa38.23■■■■□ 3.71
REXO4-204ENST00000454825 DAPK1P53355 1430 aa38.23■■■■□ 3.71
REXO4-204ENST00000454825 DUOX2Q9NRD8 1548 aa38.2■■■■□ 3.71
REXO4-204ENST00000454825 WASHC2CQ9Y4E1 1318 aa38.19■■■■□ 3.7
REXO4-204ENST00000454825 ZNF142P52746 1687 aaPredicted RBP38.19■■■■□ 3.7
REXO4-204ENST00000454825 MROH1Q8NDA8 1641 aa38.16■■■■□ 3.7
REXO4-204ENST00000454825 KIF15Q9NS87 1388 aa38.16■■■■□ 3.7
REXO4-204ENST00000454825 PZPP20742 1482 aa38.14■■■■□ 3.7
REXO4-204ENST00000454825 CEP170BQ9Y4F5 1589 aaPredicted RBP38.14■■■■□ 3.7
REXO4-204ENST00000454825 FBXO31Q5XUX0 539 aaPredicted RBP38.13■■■■□ 3.69
REXO4-204ENST00000454825 CAMSAP1Q5T5Y3 1602 aa38.12■■■■□ 3.69
REXO4-204ENST00000454825 RRP7BPQ9NSQ0 103 aa38.12■■■■□ 3.69
REXO4-204ENST00000454825 NCOA1Q15788 1441 aa38.12■■■■□ 3.69
REXO4-204ENST00000454825 ABCC3O15438 1527 aa38.1■■■■□ 3.69
REXO4-204ENST00000454825 ZC3H13Q5T200 1668 aaKnown RBP38.1■■■■□ 3.69
REXO4-204ENST00000454825 DMRT2Q9Y5R5 561 aa38.08■■■■□ 3.69
REXO4-204ENST00000454825 CHIC2Q9UKJ5 165 aa38.07■■■■□ 3.68
REXO4-204ENST00000454825 CEP152O94986 1710 aa38.07■■■■□ 3.68
REXO4-204ENST00000454825 ERBINQ96RT1 1412 aa38.06■■■■□ 3.68
REXO4-204ENST00000454825 FAM50AQ14320 339 aaKnown RBP38.05■■■■□ 3.68
REXO4-204ENST00000454825 TNRQ92752 1358 aa38.05■■■■□ 3.68
REXO4-204ENST00000454825 PTPRTO14522 1441 aa38.03■■■■□ 3.68
REXO4-204ENST00000454825 A2ML1A8K2U0 1454 aa38.03■■■■□ 3.68
REXO4-204ENST00000454825 ANKRD30AQ9BXX3 1397 aa38.02■■■■□ 3.68
REXO4-204ENST00000454825 PRDM15P57071 1507 aaPredicted RBP37.99■■■■□ 3.67
REXO4-204ENST00000454825 DEPDC5O75140 1603 aa37.98■■■■□ 3.67
REXO4-204ENST00000454825 ADGRL2O95490 1459 aa37.97■■■■□ 3.67
REXO4-204ENST00000454825 FBXO41Q8TF61 875 aa37.97■■■■□ 3.67
REXO4-204ENST00000454825 CFAP65Q6ZU64 1925 aaKnown RBP37.97■■■■□ 3.67
REXO4-204ENST00000454825 PLA2R1Q13018 1463 aa37.96■■■■□ 3.67
REXO4-204ENST00000454825 PPARGC1BQ86YN6 1023 aaKnown RBP37.96■■■■□ 3.67
REXO4-204ENST00000454825 NCKAP5LQ9HCH0 1330 aa37.95■■■■□ 3.67
REXO4-204ENST00000454825 SPATA31D1Q6ZQQ2 1576 aa37.92■■■■□ 3.66
REXO4-204ENST00000454825 CERKQ8TCT0 537 aa37.91■■■■□ 3.66
REXO4-204ENST00000454825 ERVK-7P63135 1459 aa37.89■■■■□ 3.66
REXO4-204ENST00000454825 NLRP1Q9C000 1473 aa37.88■■■■□ 3.65
REXO4-204ENST00000454825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.87■■■■□ 3.652e-6■■■□□ 15.2
REXO4-204ENST00000454825 PKD2Q13563 968 aa37.85■■■■□ 3.65
REXO4-204ENST00000454825 VWDEQ8N2E2 1590 aa37.81■■■■□ 3.64
REXO4-204ENST00000454825 ARHGAP31Q2M1Z3 1444 aa37.81■■■■□ 3.64
REXO4-204ENST00000454825 POLR1AO95602 1720 aaPredicted RBP37.81■■■■□ 3.64
REXO4-204ENST00000454825 UGGT1Q9NYU2 1555 aa37.8■■■■□ 3.64
REXO4-204ENST00000454825 LTBP4Q8N2S1 1624 aa37.79■■■■□ 3.64
REXO4-204ENST00000454825 KANK1Q14678 1352 aa37.78■■■■□ 3.64
REXO4-204ENST00000454825 ANKRD50Q9ULJ7 1429 aa37.77■■■■□ 3.64
REXO4-204ENST00000454825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.76■■■■□ 3.64
REXO4-204ENST00000454825 LMTK2Q8IWU2 1503 aa37.76■■■■□ 3.63
REXO4-204ENST00000454825 NEURL4Q96JN8 1562 aa37.75■■■■□ 3.63
REXO4-204ENST00000454825 THEMISQ8N1K5 641 aaPredicted RBP37.73■■■■□ 3.63
REXO4-204ENST00000454825 UBR1Q8IWV7 1749 aa37.69■■■■□ 3.62
REXO4-204ENST00000454825 ROCK1Q13464 1354 aa37.68■■■■□ 3.62
REXO4-204ENST00000454825 ZNF335Q9H4Z2 1342 aaPredicted RBP37.66■■■■□ 3.62
REXO4-204ENST00000454825 EFCAB6Q5THR3 1501 aa37.66■■■■□ 3.62
REXO4-204ENST00000454825 ITGAEP38570 1179 aa37.65■■■■□ 3.62
REXO4-204ENST00000454825 ANKLE2Q86XL3 938 aa37.64■■■■□ 3.62
REXO4-204ENST00000454825 UNC13BO14795 1591 aa37.61■■■■□ 3.61
REXO4-204ENST00000454825 PIK3C2BO00750 1634 aa37.59■■■■□ 3.61
REXO4-204ENST00000454825 SYNMO15061 1565 aa37.58■■■■□ 3.61
REXO4-204ENST00000454825 MED14O60244 1454 aa37.58■■■■□ 3.61
REXO4-204ENST00000454825 RRBP1Q9P2E9 1410 aaKnown RBP37.57■■■■□ 3.6
REXO4-204ENST00000454825 TET3O43151 1660 aa37.56■■■■□ 3.6
REXO4-204ENST00000454825 NPHP4O75161 1426 aaPredicted RBP37.54■■■■□ 3.6
REXO4-204ENST00000454825 NOS1P29475 1434 aa37.54■■■■□ 3.6
REXO4-204ENST00000454825 IQGAP1P46940 1657 aa37.53■■■■□ 3.6
REXO4-204ENST00000454825 IQSEC2Q5JU85 1478 aa37.52■■■■□ 3.6
REXO4-204ENST00000454825 GCC2Q8IWJ2 1684 aa37.51■■■■□ 3.6
REXO4-204ENST00000454825 ARHGAP23Q9P227 1491 aa37.5■■■■□ 3.59
REXO4-204ENST00000454825 SLIT1O75093 1534 aa37.49■■■■□ 3.59
REXO4-204ENST00000454825 RPRD2Q5VT52 1461 aaKnown RBP37.48■■■■□ 3.59
REXO4-204ENST00000454825 IDI1Q13907 227 aa37.48■■■■□ 3.59
REXO4-204ENST00000454825 KDM5AP29375 1690 aaKnown RBP37.47■■■■□ 3.59
REXO4-204ENST00000454825 IQGAP3Q86VI3 1631 aa37.46■■■■□ 3.59
REXO4-204ENST00000454825 SCAF11Q99590 1463 aaKnown RBP37.44■■■■□ 3.58
REXO4-204ENST00000454825 E9PCH4 1651 aa37.43■■■■□ 3.58
REXO4-204ENST00000454825 LTKP29376 864 aa37.42■■■■□ 3.58
REXO4-204ENST00000454825 TXNDC2Q86VQ3 553 aa37.39■■■■□ 3.58
REXO4-204ENST00000454825 STAG3Q9UJ98 1225 aa37.39■■■■□ 3.58
REXO4-204ENST00000454825 TMEM2Q9UHN6 1383 aa37.39■■■■□ 3.58
REXO4-204ENST00000454825 ADGRB3O60242 1522 aa37.37■■■■□ 3.57
REXO4-204ENST00000454825 NUP155O75694 1391 aa37.37■■■■□ 3.57
REXO4-204ENST00000454825 CPS1P31327 1500 aa37.36■■■■□ 3.57
REXO4-204ENST00000454825 SLC52A1Q9NWF4 448 aa37.36■■■■□ 3.57
REXO4-204ENST00000454825 STRCP1A6NGW2 1772 aa37.35■■■■□ 3.57
REXO4-204ENST00000454825 MYO5BQ9ULV0 1848 aa37.34■■■■□ 3.57
REXO4-204ENST00000454825 EID1Q9Y6B2 187 aa37.31■■■■□ 3.56
REXO4-204ENST00000454825 NAIPQ13075 1403 aa37.29■■■■□ 3.56
REXO4-204ENST00000454825 TMEM131LA2VDJ0 1609 aa37.25■■■■□ 3.55
REXO4-204ENST00000454825 UBAP1LF5GYI3 381 aa37.23■■■■□ 3.55
REXO4-204ENST00000454825 HFM1A2PYH4 1435 aa37.17■■■■□ 3.54
REXO4-204ENST00000454825 ZFYVE9O95405 1425 aa37.17■■■■□ 3.54
REXO4-204ENST00000454825 LRRC7Q96NW7 1537 aa37.15■■■■□ 3.54
REXO4-204ENST00000454825 SPHKAPQ2M3C7 1700 aa37.15■■■■□ 3.54
REXO4-204ENST00000454825 RIMS2Q9UQ26 1411 aa37.11■■■■□ 3.53
REXO4-204ENST00000454825 CHGAP10645 457 aaKnown RBP37.1■■■■□ 3.53
REXO4-204ENST00000454825 SLC26A8Q96RN1 970 aa37.08■■■■□ 3.53
REXO4-204ENST00000454825 XIRP1Q702N8 1843 aaKnown RBP37.07■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms