RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 ATP10AO60312 1499 aa18.99■□□□□ 0.63
LINC00343-203ENST00000454555 ABCA6Q8N139 1617 aa18.99■□□□□ 0.63
LINC00343-203ENST00000454555 TIMELESSQ9UNS1 1208 aa18.98■□□□□ 0.63
LINC00343-203ENST00000454555 ARHGEF40Q8TER5 1519 aa18.98■□□□□ 0.63
LINC00343-203ENST00000454555 DHX29Q7Z478 1369 aaKnown RBP18.98■□□□□ 0.63
LINC00343-203ENST00000454555 NAIPQ13075 1403 aa18.97■□□□□ 0.63
LINC00343-203ENST00000454555 SETD5Q9C0A6 1442 aa18.97■□□□□ 0.63
LINC00343-203ENST00000454555 DUOX2Q9NRD8 1548 aa18.97■□□□□ 0.63
LINC00343-203ENST00000454555 RAB3GAP2Q9H2M9 1393 aa18.97■□□□□ 0.63
LINC00343-203ENST00000454555 A2MP01023 1474 aa18.97■□□□□ 0.63
LINC00343-203ENST00000454555 REREQ9P2R6 1566 aa18.96■□□□□ 0.63
LINC00343-203ENST00000454555 ERBINQ96RT1 1412 aa18.94■□□□□ 0.62
LINC00343-203ENST00000454555 ANKRD50Q9ULJ7 1429 aa18.94■□□□□ 0.62
LINC00343-203ENST00000454555 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
LINC00343-203ENST00000454555 AGLP35573 1532 aa18.91■□□□□ 0.62
LINC00343-203ENST00000454555 EIF2AK4Q9P2K8 1649 aaKnown RBP18.88■□□□□ 0.61
LINC00343-203ENST00000454555 KIF3BO15066 747 aa18.86■□□□□ 0.61
LINC00343-203ENST00000454555 BCORL1Q5H9F3 1711 aa18.86■□□□□ 0.61
LINC00343-203ENST00000454555 SIGLEC1Q9BZZ2 1709 aa18.84■□□□□ 0.61
LINC00343-203ENST00000454555 ARID4BQ4LE39 1312 aaPredicted RBP18.82■□□□□ 0.6
LINC00343-203ENST00000454555 SUPT16HQ9Y5B9 1047 aaKnown RBP18.81■□□□□ 0.6
LINC00343-203ENST00000454555 RNF17Q9BXT8 1623 aaKnown RBP18.8■□□□□ 0.6
LINC00343-203ENST00000454555 PPP6R1Q9UPN7 881 aa18.8■□□□□ 0.6
LINC00343-203ENST00000454555 DEPDC5O75140 1603 aa18.8■□□□□ 0.6
LINC00343-203ENST00000454555 GGT6Q6P531 493 aa18.79■□□□□ 0.6
LINC00343-203ENST00000454555 UNC13BO14795 1591 aa18.79■□□□□ 0.6
LINC00343-203ENST00000454555 MROH1Q8NDA8 1641 aa18.77■□□□□ 0.6
LINC00343-203ENST00000454555 PRDM15P57071 1507 aaPredicted RBP18.77■□□□□ 0.59
LINC00343-203ENST00000454555 NUP155O75694 1391 aa18.76■□□□□ 0.59
LINC00343-203ENST00000454555 KANK1Q14678 1352 aa18.76■□□□□ 0.59
LINC00343-203ENST00000454555 TRIM52Q96A61 297 aa18.76■□□□□ 0.59
LINC00343-203ENST00000454555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.76■□□□□ 0.59
LINC00343-203ENST00000454555 MLECQ14165 292 aa18.75■□□□□ 0.59
LINC00343-203ENST00000454555 VWDEQ8N2E2 1590 aa18.75■□□□□ 0.59
LINC00343-203ENST00000454555 KDM5DQ9BY66 1539 aa18.74■□□□□ 0.59
LINC00343-203ENST00000454555 FAM135AQ9P2D6 1515 aa18.74■□□□□ 0.59
LINC00343-203ENST00000454555 WASHC2CQ9Y4E1 1318 aa18.72■□□□□ 0.59
LINC00343-203ENST00000454555 LMTK2Q8IWU2 1503 aa18.71■□□□□ 0.59
LINC00343-203ENST00000454555 IQGAP3Q86VI3 1631 aa18.71■□□□□ 0.59
LINC00343-203ENST00000454555 PZPP20742 1482 aa18.69■□□□□ 0.58
LINC00343-203ENST00000454555 ABCC3O15438 1527 aa18.69■□□□□ 0.58
LINC00343-203ENST00000454555 CCER2I3L3R5 266 aa18.68■□□□□ 0.58
LINC00343-203ENST00000454555 MPHOSPH9Q99550 1183 aa18.68■□□□□ 0.58
LINC00343-203ENST00000454555 CNTLNQ9NXG0 1405 aa18.68■□□□□ 0.58
LINC00343-203ENST00000454555 ESF1Q9H501 851 aaKnown RBP18.68■□□□□ 0.58
LINC00343-203ENST00000454555 ZC3H13Q5T200 1668 aaKnown RBP18.67■□□□□ 0.58
LINC00343-203ENST00000454555 SLC4A1APQ9BWU0 796 aaKnown RBP18.67■□□□□ 0.58
LINC00343-203ENST00000454555 MSH5O43196 834 aa18.66■□□□□ 0.58
LINC00343-203ENST00000454555 ADAMTSL3P82987 1691 aa18.66■□□□□ 0.58
LINC00343-203ENST00000454555 PPP1R15AO75807 674 aaPredicted RBP18.65■□□□□ 0.58
LINC00343-203ENST00000454555 ARHGAP31Q2M1Z3 1444 aa18.64■□□□□ 0.57
LINC00343-203ENST00000454555 TET3O43151 1660 aa18.63■□□□□ 0.57
LINC00343-203ENST00000454555 CEP152O94986 1710 aa18.63■□□□□ 0.57
LINC00343-203ENST00000454555 PKD2Q13563 968 aa18.62■□□□□ 0.57
LINC00343-203ENST00000454555 CLTCQ00610 1675 aaKnown RBP18.62■□□□□ 0.57
LINC00343-203ENST00000454555 ZMYM3Q14202 1370 aa18.62■□□□□ 0.57
LINC00343-203ENST00000454555 EFCAB6Q5THR3 1501 aa18.61■□□□□ 0.57
LINC00343-203ENST00000454555 MADDQ8WXG6 1647 aa18.61■□□□□ 0.57
LINC00343-203ENST00000454555 FER1L4A9Z1Z3 1794 aa18.61■□□□□ 0.57
LINC00343-203ENST00000454555 CAMSAP1Q5T5Y3 1602 aa18.6■□□□□ 0.57
LINC00343-203ENST00000454555 MROH2AA6NES4 1674 aa18.6■□□□□ 0.57
LINC00343-203ENST00000454555 RPRD2Q5VT52 1461 aaKnown RBP18.6■□□□□ 0.57
LINC00343-203ENST00000454555 NPATQ14207 1427 aa18.59■□□□□ 0.57
LINC00343-203ENST00000454555 TONSLQ96HA7 1378 aa18.58■□□□□ 0.57
LINC00343-203ENST00000454555 SIN3AQ96ST3 1273 aa18.58■□□□□ 0.56
LINC00343-203ENST00000454555 KDM4FA0A1W2PPD8 638 aa18.57■□□□□ 0.56
LINC00343-203ENST00000454555 E9PCH4 1651 aa18.56■□□□□ 0.56
LINC00343-203ENST00000454555 ANP32CO43423 234 aa18.56■□□□□ 0.56
LINC00343-203ENST00000454555 DDX10Q13206 875 aaKnown RBP18.55■□□□□ 0.56
LINC00343-203ENST00000454555 RIMS1Q86UR5 1692 aaKnown RBP18.55■□□□□ 0.56
LINC00343-203ENST00000454555 PTPRTO14522 1441 aa18.54■□□□□ 0.56
LINC00343-203ENST00000454555 NOS1P29475 1434 aa18.53■□□□□ 0.56
LINC00343-203ENST00000454555 PTPRMP28827 1452 aa18.53■□□□□ 0.56
LINC00343-203ENST00000454555 CEBPAP49715 358 aaPredicted RBP18.53■□□□□ 0.56
LINC00343-203ENST00000454555 FBXO31Q5XUX0 539 aaPredicted RBP18.53■□□□□ 0.56
LINC00343-203ENST00000454555 C3P01024 1663 aa18.51■□□□□ 0.55
LINC00343-203ENST00000454555 TSHZ2Q9NRE2 1034 aa18.51■□□□□ 0.55
LINC00343-203ENST00000454555 ANKRD30BQ9BXX2 1392 aa18.51■□□□□ 0.55
LINC00343-203ENST00000454555 ERVK-7P63135 1459 aa18.51■□□□□ 0.55
LINC00343-203ENST00000454555 SPATA31D1Q6ZQQ2 1576 aa18.51■□□□□ 0.55
LINC00343-203ENST00000454555 PLA2R1Q13018 1463 aa18.5■□□□□ 0.55
LINC00343-203ENST00000454555 NEFLP07196 543 aa18.5■□□□□ 0.55
LINC00343-203ENST00000454555 PREX1Q8TCU6 1659 aa18.49■□□□□ 0.55
LINC00343-203ENST00000454555 TRPM2O94759 1503 aa18.47■□□□□ 0.55
LINC00343-203ENST00000454555 SLC52A1Q9NWF4 448 aa18.46■□□□□ 0.55
LINC00343-203ENST00000454555 SPHKAPQ2M3C7 1700 aa18.46■□□□□ 0.55
LINC00343-203ENST00000454555 TNRQ92752 1358 aa18.46■□□□□ 0.55
LINC00343-203ENST00000454555 SYNMO15061 1565 aa18.44■□□□□ 0.54
LINC00343-203ENST00000454555 PLPPR3Q6T4P5 718 aa18.44■□□□□ 0.54
LINC00343-203ENST00000454555 CCDC144AA2RUR9 1427 aa18.43■□□□□ 0.54
LINC00343-203ENST00000454555 CFAP65Q6ZU64 1925 aaKnown RBP18.42■□□□□ 0.54
LINC00343-203ENST00000454555 IDI1Q13907 227 aa18.42■□□□□ 0.54
LINC00343-203ENST00000454555 PIK3C2BO00750 1634 aa18.41■□□□□ 0.54
LINC00343-203ENST00000454555 NLRP1Q9C000 1473 aa18.4■□□□□ 0.54
LINC00343-203ENST00000454555 FKBP8Q14318 412 aa18.4■□□□□ 0.54
LINC00343-203ENST00000454555 CLTCL1P53675 1640 aa18.39■□□□□ 0.53
LINC00343-203ENST00000454555 UGGT1Q9NYU2 1555 aa18.39■□□□□ 0.53
LINC00343-203ENST00000454555 SETD1BQ9UPS6 1966 aaKnown RBP18.37■□□□□ 0.53
LINC00343-203ENST00000454555 A2ML1A8K2U0 1454 aa18.34■□□□□ 0.53
LINC00343-203ENST00000454555 NEURL4Q96JN8 1562 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms