RNA–Protein interactions for RNA: ENST00000454453.5

NEK6-211, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-211ENST00000454453 NEURL4Q96JN8 1562 aa41.27■■■■■ 4.2
NEK6-211ENST00000454453 POLR1AO95602 1720 aaPredicted RBP41.22■■■■■ 4.19
NEK6-211ENST00000454453 TNRQ92752 1358 aa41.22■■■■■ 4.19
NEK6-211ENST00000454453 KIF3BO15066 747 aa41.21■■■■■ 4.19
NEK6-211ENST00000454453 PZPP20742 1482 aa41.21■■■■■ 4.19
NEK6-211ENST00000454453 KDM5DQ9BY66 1539 aa41.2■■■■■ 4.19
NEK6-211ENST00000454453 CCDC141Q6ZP82 1450 aa41.19■■■■■ 4.18
NEK6-211ENST00000454453 CAMSAP2Q08AD1 1489 aa41.17■■■■■ 4.18
NEK6-211ENST00000454453 FAM135AQ9P2D6 1515 aa41.14■■■■■ 4.18
NEK6-211ENST00000454453 NCOA2Q15596 1464 aa41.14■■■■■ 4.18
NEK6-211ENST00000454453 SHANK2Q9UPX8 1470 aa41.11■■■■■ 4.17
NEK6-211ENST00000454453 CPS1P31327 1500 aa41.11■■■■■ 4.17
NEK6-211ENST00000454453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP41.1■■■■■ 4.171e-7■■■■■ 59.4
NEK6-211ENST00000454453 HSPA1LP34931 641 aa41.08■■■■■ 4.17
NEK6-211ENST00000454453 WASHC2CQ9Y4E1 1318 aa41.08■■■■■ 4.17
NEK6-211ENST00000454453 MIA2Q96PC5 1412 aa41.06■■■■■ 4.16
NEK6-211ENST00000454453 VWDEQ8N2E2 1590 aa41.06■■■■■ 4.16
NEK6-211ENST00000454453 PIP4K2BP78356 416 aa41.04■■■■■ 4.16
NEK6-211ENST00000454453 RSPH4AQ5TD94 716 aa41.03■■■■■ 4.16
NEK6-211ENST00000454453 SCAF1Q9H7N4 1312 aaKnown RBP41.02■■■■■ 4.16
NEK6-211ENST00000454453 ARHGEF5Q12774 1597 aa41.02■■■■■ 4.16
NEK6-211ENST00000454453 UGGT1Q9NYU2 1555 aa41.01■■■■■ 4.16
NEK6-211ENST00000454453 ANKLE2Q86XL3 938 aa41.01■■■■■ 4.16
NEK6-211ENST00000454453 NLRP1Q9C000 1473 aa41.01■■■■■ 4.16
NEK6-211ENST00000454453 MED14O60244 1454 aa40.99■■■■■ 4.15
NEK6-211ENST00000454453 ALKQ9UM73 1620 aa40.99■■■■■ 4.15
NEK6-211ENST00000454453 MED1Q15648 1581 aaPredicted RBP40.99■■■■■ 4.15
NEK6-211ENST00000454453 TOM1O60784 492 aa40.98■■■■■ 4.15
NEK6-211ENST00000454453 DEPDC5O75140 1603 aa40.97■■■■■ 4.15
NEK6-211ENST00000454453 THEMISQ8N1K5 641 aaPredicted RBP40.97■■■■■ 4.15
NEK6-211ENST00000454453 NPHP4O75161 1426 aaPredicted RBP40.95■■■■■ 4.15
NEK6-211ENST00000454453 RNF17Q9BXT8 1623 aaKnown RBP40.93■■■■■ 4.14
NEK6-211ENST00000454453 ABCC3O15438 1527 aa40.89■■■■■ 4.14
NEK6-211ENST00000454453 TSPY4P0CV99 314 aa40.88■■■■■ 4.13
NEK6-211ENST00000454453 TSPY10P0CW01 314 aa40.88■■■■■ 4.13
NEK6-211ENST00000454453 IQGAP1P46940 1657 aa40.88■■■■■ 4.13
NEK6-211ENST00000454453 STRCP1A6NGW2 1772 aa40.86■■■■■ 4.13
NEK6-211ENST00000454453 MAST1Q9Y2H9 1570 aa40.84■■■■■ 4.13
NEK6-211ENST00000454453 ZC3H13Q5T200 1668 aaKnown RBP40.83■■■■■ 4.13
NEK6-211ENST00000454453 MROH1Q8NDA8 1641 aa40.82■■■■■ 4.12
NEK6-211ENST00000454453 ERVK-7P63135 1459 aa40.8■■■■■ 4.12
NEK6-211ENST00000454453 LRRC9Q6ZRR7 1453 aa40.8■■■■■ 4.12
NEK6-211ENST00000454453 EIF2AK4Q9P2K8 1649 aaKnown RBP40.78■■■■■ 4.12
NEK6-211ENST00000454453 LRRC7Q96NW7 1537 aa40.77■■■■■ 4.12
NEK6-211ENST00000454453 CEP152O94986 1710 aa40.72■■■■■ 4.11
NEK6-211ENST00000454453 UBR1Q8IWV7 1749 aa40.7■■■■■ 4.11
NEK6-211ENST00000454453 SYNMO15061 1565 aa40.68■■■■■ 4.1
NEK6-211ENST00000454453 VPS8Q8N3P4 1428 aa40.67■■■■■ 4.1
NEK6-211ENST00000454453 KANK4Q5T7N3 995 aaPredicted RBP40.66■■■■■ 4.1
NEK6-211ENST00000454453 CFAP65Q6ZU64 1925 aaKnown RBP40.62■■■■■ 4.09
NEK6-211ENST00000454453 SCAF11Q99590 1463 aaKnown RBP40.6■■■■■ 4.09
NEK6-211ENST00000454453 SENP3Q9H4L4 574 aaPredicted RBP40.6■■■■■ 4.09
NEK6-211ENST00000454453 MYOM3Q5VTT5 1437 aa40.59■■■■■ 4.09
NEK6-211ENST00000454453 DUOX2Q9NRD8 1548 aa40.59■■■■■ 4.09
NEK6-211ENST00000454453 ARHGAP23Q9P227 1491 aa40.58■■■■■ 4.09
NEK6-211ENST00000454453 LTKP29376 864 aa40.58■■■■■ 4.09
NEK6-211ENST00000454453 SLIT1O75093 1534 aa40.56■■■■■ 4.08
NEK6-211ENST00000454453 PHF23Q9BUL5 403 aaPredicted RBP40.55■■■■■ 4.08
NEK6-211ENST00000454453 MAP3K1Q13233 1512 aa40.54■■■■■ 4.08
NEK6-211ENST00000454453 PRDM15P57071 1507 aaPredicted RBP40.53■■■■■ 4.08
NEK6-211ENST00000454453 ARHGAP31Q2M1Z3 1444 aa40.51■■■■■ 4.08
NEK6-211ENST00000454453 XIRP1Q702N8 1843 aaKnown RBP40.51■■■■■ 4.07
NEK6-211ENST00000454453 TXNDC2Q86VQ3 553 aa40.49■■■■■ 4.07
NEK6-211ENST00000454453 LOC105371045A0A1W2PR82 267 aa40.47■■■■■ 4.07
NEK6-211ENST00000454453 KIF15Q9NS87 1388 aa40.47■■■■■ 4.07
NEK6-211ENST00000454453 CROCC2H7BZ55 1655 aa40.45■■■■■ 4.07
NEK6-211ENST00000454453 ABCC5O15440 1437 aa40.44■■■■■ 4.06
NEK6-211ENST00000454453 PIK3C2BO00750 1634 aa40.44■■■■■ 4.06
NEK6-211ENST00000454453 ERBINQ96RT1 1412 aa40.43■■■■■ 4.06
NEK6-211ENST00000454453 RRP7BPQ9NSQ0 103 aa40.4■■■■■ 4.06
NEK6-211ENST00000454453 RGS17Q9UGC6 210 aaPredicted RBP40.38■■■■■ 4.05
NEK6-211ENST00000454453 TMEM2Q9UHN6 1383 aa40.36■■■■■ 4.05
NEK6-211ENST00000454453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.34■■■■■ 4.052e-8■□□□□ 10.5
NEK6-211ENST00000454453 PTPN23Q9H3S7 1636 aa40.34■■■■■ 4.05
NEK6-211ENST00000454453 EID1Q9Y6B2 187 aa40.33■■■■■ 4.05
NEK6-211ENST00000454453 DAPK1P53355 1430 aa40.3■■■■■ 4.04
NEK6-211ENST00000454453 KDM5AP29375 1690 aaKnown RBP40.27■■■■■ 4.04
NEK6-211ENST00000454453 EFCAB6Q5THR3 1501 aa40.26■■■■■ 4.04
NEK6-211ENST00000454453 FAM135BQ49AJ0 1406 aa40.26■■■■■ 4.04
NEK6-211ENST00000454453 IDI1Q13907 227 aa40.26■■■■■ 4.04
NEK6-211ENST00000454453 LMTK2Q8IWU2 1503 aa40.26■■■■■ 4.03
NEK6-211ENST00000454453 TMEM94Q12767 1356 aa40.24■■■■■ 4.03
NEK6-211ENST00000454453 TET3O43151 1660 aa40.24■■■■■ 4.03
NEK6-211ENST00000454453 KANK1Q14678 1352 aa40.21■■■■■ 4.03
NEK6-211ENST00000454453 STAG3Q9UJ98 1225 aa40.2■■■■■ 4.03
NEK6-211ENST00000454453 KCNA6P17658 529 aa40.18■■■■■ 4.02
NEK6-211ENST00000454453 FGD6Q6ZV73 1430 aa40.17■■■■■ 4.02
NEK6-211ENST00000454453 SLC26A8Q96RN1 970 aa40.17■■■■■ 4.02
NEK6-211ENST00000454453 NOS1P29475 1434 aa40.16■■■■■ 4.02
NEK6-211ENST00000454453 RBM33Q96EV2 1170 aaKnown RBP40.16■■■■■ 4.02
NEK6-211ENST00000454453 CHIC2Q9UKJ5 165 aa40.15■■■■■ 4.02
NEK6-211ENST00000454453 ROBO1Q9Y6N7 1651 aa40.15■■■■■ 4.02
NEK6-211ENST00000454453 ADGRB3O60242 1522 aa40.11■■■■■ 4.01
NEK6-211ENST00000454453 ANKRD30AQ9BXX3 1397 aa40.11■■■■■ 4.01
NEK6-211ENST00000454453 NWD1Q149M9 1564 aa40.1■■■■■ 4.01
NEK6-211ENST00000454453 POTEAQ6S8J7 498 aa40.08■■■■■ 4.01
NEK6-211ENST00000454453 PROSER2Q86WR7 435 aaPredicted RBP40.08■■■■■ 4.01
NEK6-211ENST00000454453 NKTRP30414 1462 aaKnown RBP40.04■■■■■ 4
NEK6-211ENST00000454453 ADGRL2O95490 1459 aa39.99■■■■□ 3.99
NEK6-211ENST00000454453 SLC52A1Q9NWF4 448 aa39.98■■■■□ 3.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms