RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 A2ML1A8K2U0 1454 aa37.69■■■■□ 3.62
LYSMD2-202ENST00000454181 TCOF1Q13428 1488 aaKnown RBP37.69■■■■□ 3.62
LYSMD2-202ENST00000454181 FBXO31Q5XUX0 539 aaPredicted RBP37.66■■■■□ 3.62
LYSMD2-202ENST00000454181 TNRQ92752 1358 aa37.66■■■■□ 3.62
LYSMD2-202ENST00000454181 UBAP1LF5GYI3 381 aa37.64■■■■□ 3.62
LYSMD2-202ENST00000454181 KDM5DQ9BY66 1539 aa37.62■■■■□ 3.61
LYSMD2-202ENST00000454181 FAM135AQ9P2D6 1515 aa37.61■■■■□ 3.61
LYSMD2-202ENST00000454181 PZPP20742 1482 aa37.58■■■■□ 3.61
LYSMD2-202ENST00000454181 DNMT1P26358 1616 aaKnown RBP37.58■■■■□ 3.61
LYSMD2-202ENST00000454181 VPS8Q8N3P4 1428 aa37.58■■■■□ 3.61
LYSMD2-202ENST00000454181 ARHGEF5Q12774 1597 aa37.58■■■■□ 3.61
LYSMD2-202ENST00000454181 LOC105371045A0A1W2PR82 267 aa37.57■■■■□ 3.6
LYSMD2-202ENST00000454181 LRRC9Q6ZRR7 1453 aa37.56■■■■□ 3.6
LYSMD2-202ENST00000454181 THEMISQ8N1K5 641 aaPredicted RBP37.53■■■■□ 3.6
LYSMD2-202ENST00000454181 ANKLE2Q86XL3 938 aa37.52■■■■□ 3.6
LYSMD2-202ENST00000454181 ILDR2Q71H61 639 aa37.51■■■■□ 3.6
LYSMD2-202ENST00000454181 MIA2Q96PC5 1412 aa37.49■■■■□ 3.59
LYSMD2-202ENST00000454181 SPATA31D1Q6ZQQ2 1576 aa37.46■■■■□ 3.59
LYSMD2-202ENST00000454181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.45■■■■□ 3.59
LYSMD2-202ENST00000454181 NLRP1Q9C000 1473 aa37.45■■■■□ 3.59
LYSMD2-202ENST00000454181 KANK4Q5T7N3 995 aaPredicted RBP37.44■■■■□ 3.58
LYSMD2-202ENST00000454181 POLR1AO95602 1720 aaPredicted RBP37.39■■■■□ 3.58
LYSMD2-202ENST00000454181 UGGT1Q9NYU2 1555 aa37.39■■■■□ 3.58
LYSMD2-202ENST00000454181 SOCS7O14512 581 aa37.39■■■■□ 3.58
LYSMD2-202ENST00000454181 MAP3K1Q13233 1512 aa37.39■■■■□ 3.58
LYSMD2-202ENST00000454181 SCAF1Q9H7N4 1312 aaKnown RBP37.38■■■■□ 3.58
LYSMD2-202ENST00000454181 MAST1Q9Y2H9 1570 aa37.38■■■■□ 3.57
LYSMD2-202ENST00000454181 MYOM3Q5VTT5 1437 aa37.37■■■■□ 3.57
LYSMD2-202ENST00000454181 SHANK2Q9UPX8 1470 aa37.36■■■■□ 3.57
LYSMD2-202ENST00000454181 CPS1P31327 1500 aa37.36■■■■□ 3.57
LYSMD2-202ENST00000454181 NEURL4Q96JN8 1562 aa37.35■■■■□ 3.57
LYSMD2-202ENST00000454181 TOM1O60784 492 aa37.35■■■■□ 3.57
LYSMD2-202ENST00000454181 APLP2Q06481 763 aa37.35■■■■□ 3.57
LYSMD2-202ENST00000454181 RNF17Q9BXT8 1623 aaKnown RBP37.33■■■■□ 3.57
LYSMD2-202ENST00000454181 ABCC3O15438 1527 aa37.32■■■■□ 3.57
LYSMD2-202ENST00000454181 NPHP4O75161 1426 aaPredicted RBP37.31■■■■□ 3.56
LYSMD2-202ENST00000454181 PIP4K2BP78356 416 aa37.31■■■■□ 3.56
LYSMD2-202ENST00000454181 EIF2AK4Q9P2K8 1649 aaKnown RBP37.28■■■■□ 3.56
LYSMD2-202ENST00000454181 ZC3H13Q5T200 1668 aaKnown RBP37.28■■■■□ 3.56
LYSMD2-202ENST00000454181 MED14O60244 1454 aa37.26■■■■□ 3.55
LYSMD2-202ENST00000454181 DUOX2Q9NRD8 1548 aa37.25■■■■□ 3.55
LYSMD2-202ENST00000454181 DEPDC5O75140 1603 aa37.23■■■■□ 3.55
LYSMD2-202ENST00000454181 ERVK-7P63135 1459 aa37.23■■■■□ 3.55
LYSMD2-202ENST00000454181 HSPA1LP34931 641 aa37.2■■■■□ 3.55
LYSMD2-202ENST00000454181 KIF15Q9NS87 1388 aa37.19■■■■□ 3.54
LYSMD2-202ENST00000454181 RRP7BPQ9NSQ0 103 aa37.19■■■■□ 3.54
LYSMD2-202ENST00000454181 VWDEQ8N2E2 1590 aa37.18■■■■□ 3.54
LYSMD2-202ENST00000454181 MROH1Q8NDA8 1641 aa37.16■■■■□ 3.54
LYSMD2-202ENST00000454181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.15■■■■□ 3.54
LYSMD2-202ENST00000454181 IQGAP1P46940 1657 aa37.14■■■■□ 3.54
LYSMD2-202ENST00000454181 ABCC5O15440 1437 aa37.13■■■■□ 3.53
LYSMD2-202ENST00000454181 CEP152O94986 1710 aa37.12■■■■□ 3.53
LYSMD2-202ENST00000454181 ERBINQ96RT1 1412 aa37.11■■■■□ 3.53
LYSMD2-202ENST00000454181 KANK1Q14678 1352 aa37.08■■■■□ 3.53
LYSMD2-202ENST00000454181 PTPN23Q9H3S7 1636 aa37.08■■■■□ 3.53
LYSMD2-202ENST00000454181 CFAP65Q6ZU64 1925 aaKnown RBP37.08■■■■□ 3.53
LYSMD2-202ENST00000454181 TXNDC2Q86VQ3 553 aa37.07■■■■□ 3.52
LYSMD2-202ENST00000454181 ARHGAP31Q2M1Z3 1444 aa37.06■■■■□ 3.52
LYSMD2-202ENST00000454181 EID1Q9Y6B2 187 aa37.05■■■■□ 3.52
LYSMD2-202ENST00000454181 DAPK1P53355 1430 aa37.04■■■■□ 3.52
LYSMD2-202ENST00000454181 STAG3Q9UJ98 1225 aa37.04■■■■□ 3.52
LYSMD2-202ENST00000454181 SCAF11Q99590 1463 aaKnown RBP37.04■■■■□ 3.52
LYSMD2-202ENST00000454181 PRDM15P57071 1507 aaPredicted RBP37.04■■■■□ 3.52
LYSMD2-202ENST00000454181 CHIC2Q9UKJ5 165 aa37.02■■■■□ 3.52
LYSMD2-202ENST00000454181 UBR1Q8IWV7 1749 aa37.02■■■■□ 3.52
LYSMD2-202ENST00000454181 CROCC2H7BZ55 1655 aa37.01■■■■□ 3.52
LYSMD2-202ENST00000454181 ANKRD30AQ9BXX3 1397 aa37.01■■■■□ 3.51
LYSMD2-202ENST00000454181 FGD6Q6ZV73 1430 aa37.01■■■■□ 3.51
LYSMD2-202ENST00000454181 LTKP29376 864 aa36.99■■■■□ 3.51
LYSMD2-202ENST00000454181 LRRC7Q96NW7 1537 aa36.99■■■■□ 3.51
LYSMD2-202ENST00000454181 SLIT1O75093 1534 aa36.94■■■■□ 3.5
LYSMD2-202ENST00000454181 ARHGAP23Q9P227 1491 aa36.94■■■■□ 3.5
LYSMD2-202ENST00000454181 SENP3Q9H4L4 574 aaPredicted RBP36.93■■■■□ 3.5
LYSMD2-202ENST00000454181 SYNMO15061 1565 aa36.92■■■■□ 3.5
LYSMD2-202ENST00000454181 MED1Q15648 1581 aaPredicted RBP36.91■■■■□ 3.5
LYSMD2-202ENST00000454181 STRCP1A6NGW2 1772 aa36.91■■■■□ 3.5
LYSMD2-202ENST00000454181 PHF23Q9BUL5 403 aaPredicted RBP36.89■■■■□ 3.5
LYSMD2-202ENST00000454181 TMEM2Q9UHN6 1383 aa36.89■■■■□ 3.5
LYSMD2-202ENST00000454181 ALKQ9UM73 1620 aa36.87■■■■□ 3.49
LYSMD2-202ENST00000454181 IDI1Q13907 227 aa36.86■■■■□ 3.49
LYSMD2-202ENST00000454181 PIK3C2BO00750 1634 aa36.85■■■■□ 3.49
LYSMD2-202ENST00000454181 FAM50AQ14320 339 aaKnown RBP36.84■■■■□ 3.49
LYSMD2-202ENST00000454181 LMTK2Q8IWU2 1503 aa36.82■■■■□ 3.48
LYSMD2-202ENST00000454181 EFCAB6Q5THR3 1501 aa36.8■■■■□ 3.48
LYSMD2-202ENST00000454181 SLC52A1Q9NWF4 448 aa36.75■■■■□ 3.47
LYSMD2-202ENST00000454181 BCANQ96GW7 911 aa36.74■■■■□ 3.47
LYSMD2-202ENST00000454181 ADGRL2O95490 1459 aa36.72■■■■□ 3.47
LYSMD2-202ENST00000454181 SLC26A8Q96RN1 970 aa36.72■■■■□ 3.47
LYSMD2-202ENST00000454181 KDM5AP29375 1690 aaKnown RBP36.71■■■■□ 3.47
LYSMD2-202ENST00000454181 NOS1P29475 1434 aa36.71■■■■□ 3.47
LYSMD2-202ENST00000454181 KCNA6P17658 529 aa36.71■■■■□ 3.47
LYSMD2-202ENST00000454181 ANKRD50Q9ULJ7 1429 aa36.68■■■■□ 3.46
LYSMD2-202ENST00000454181 PROSER2Q86WR7 435 aaPredicted RBP36.68■■■■□ 3.46
LYSMD2-202ENST00000454181 TMEM94Q12767 1356 aa36.66■■■■□ 3.46
LYSMD2-202ENST00000454181 ADGRB3O60242 1522 aa36.64■■■■□ 3.46
LYSMD2-202ENST00000454181 HDGFP51858 240 aaKnown RBP36.63■■■■□ 3.45
LYSMD2-202ENST00000454181 RPRD2Q5VT52 1461 aaKnown RBP36.62■■■■□ 3.45
LYSMD2-202ENST00000454181 PPP1R15AO75807 674 aaPredicted RBP36.59■■■■□ 3.45
LYSMD2-202ENST00000454181 XIRP1Q702N8 1843 aaKnown RBP36.59■■■■□ 3.45
LYSMD2-202ENST00000454181 FAM135BQ49AJ0 1406 aa36.59■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms