RNA–Protein interactions for RNA: ENST00000453838.2

KRT18P28-201, Transcript of keratin 18 pseudogene 28, humanhuman

BASIC

Gene KRT18P28, Length 1,332 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P28-201ENST00000453838 TNRQ92752 1358 aa26.47■■□□□ 1.83
KRT18P28-201ENST00000453838 RSPH4AQ5TD94 716 aa26.47■■□□□ 1.83
KRT18P28-201ENST00000453838 WASHC2CQ9Y4E1 1318 aa26.46■■□□□ 1.83
KRT18P28-201ENST00000453838 CCDC141Q6ZP82 1450 aa26.44■■□□□ 1.82
KRT18P28-201ENST00000453838 NCOA2Q15596 1464 aa26.43■■□□□ 1.82
KRT18P28-201ENST00000453838 DNMT1P26358 1616 aaKnown RBP26.42■■□□□ 1.82
KRT18P28-201ENST00000453838 CAMSAP2Q08AD1 1489 aa26.41■■□□□ 1.82
KRT18P28-201ENST00000453838 PZPP20742 1482 aa26.4■■□□□ 1.82
KRT18P28-201ENST00000453838 TSPY4P0CV99 314 aa26.39■■□□□ 1.82
KRT18P28-201ENST00000453838 TSPY10P0CW01 314 aa26.39■■□□□ 1.82
KRT18P28-201ENST00000453838 ANKLE2Q86XL3 938 aa26.39■■□□□ 1.82
KRT18P28-201ENST00000453838 SCAF1Q9H7N4 1312 aaKnown RBP26.38■■□□□ 1.81
KRT18P28-201ENST00000453838 KDM5DQ9BY66 1539 aa26.38■■□□□ 1.81
KRT18P28-201ENST00000453838 THEMISQ8N1K5 641 aaPredicted RBP26.38■■□□□ 1.81
KRT18P28-201ENST00000453838 MIA2Q96PC5 1412 aa26.36■■□□□ 1.81
KRT18P28-201ENST00000453838 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.36■■□□□ 1.81
KRT18P28-201ENST00000453838 PIP4K2BP78356 416 aa26.36■■□□□ 1.81
KRT18P28-201ENST00000453838 TOM1O60784 492 aa26.35■■□□□ 1.81
KRT18P28-201ENST00000453838 FAM135AQ9P2D6 1515 aa26.34■■□□□ 1.81
KRT18P28-201ENST00000453838 HSPA1LP34931 641 aa26.33■■□□□ 1.81
KRT18P28-201ENST00000453838 SHANK2Q9UPX8 1470 aa26.33■■□□□ 1.8
KRT18P28-201ENST00000453838 CPS1P31327 1500 aa26.31■■□□□ 1.8
KRT18P28-201ENST00000453838 NEURL4Q96JN8 1562 aa26.31■■□□□ 1.8
KRT18P28-201ENST00000453838 NLRP1Q9C000 1473 aa26.3■■□□□ 1.8
KRT18P28-201ENST00000453838 NPHP4O75161 1426 aaPredicted RBP26.27■■□□□ 1.8
KRT18P28-201ENST00000453838 ARHGEF5Q12774 1597 aa26.27■■□□□ 1.8
KRT18P28-201ENST00000453838 UGGT1Q9NYU2 1555 aa26.26■■□□□ 1.79
KRT18P28-201ENST00000453838 POLR1AO95602 1720 aaPredicted RBP26.22■■□□□ 1.79
KRT18P28-201ENST00000453838 MED14O60244 1454 aa26.22■■□□□ 1.79
KRT18P28-201ENST00000453838 LRRC9Q6ZRR7 1453 aa26.22■■□□□ 1.79
KRT18P28-201ENST00000453838 VWDEQ8N2E2 1590 aa26.2■■□□□ 1.79
KRT18P28-201ENST00000453838 KANK4Q5T7N3 995 aaPredicted RBP26.18■■□□□ 1.78
KRT18P28-201ENST00000453838 VPS8Q8N3P4 1428 aa26.18■■□□□ 1.78
KRT18P28-201ENST00000453838 ABCC3O15438 1527 aa26.18■■□□□ 1.78
KRT18P28-201ENST00000453838 LOC105371045A0A1W2PR82 267 aa26.16■■□□□ 1.78
KRT18P28-201ENST00000453838 DEPDC5O75140 1603 aa26.16■■□□□ 1.78
KRT18P28-201ENST00000453838 RNF17Q9BXT8 1623 aaKnown RBP26.14■■□□□ 1.77
KRT18P28-201ENST00000453838 ERVK-7P63135 1459 aa26.13■■□□□ 1.77
KRT18P28-201ENST00000453838 MAST1Q9Y2H9 1570 aa26.13■■□□□ 1.77
KRT18P28-201ENST00000453838 MED1Q15648 1581 aaPredicted RBP26.11■■□□□ 1.77
KRT18P28-201ENST00000453838 MYOM3Q5VTT5 1437 aa26.1■■□□□ 1.77
KRT18P28-201ENST00000453838 SENP3Q9H4L4 574 aaPredicted RBP26.1■■□□□ 1.77
KRT18P28-201ENST00000453838 IQGAP1P46940 1657 aa26.08■■□□□ 1.76
KRT18P28-201ENST00000453838 LRRC7Q96NW7 1537 aa26.07■■□□□ 1.76
KRT18P28-201ENST00000453838 ZC3H13Q5T200 1668 aaKnown RBP26.07■■□□□ 1.76
KRT18P28-201ENST00000453838 PHF23Q9BUL5 403 aaPredicted RBP26.07■■□□□ 1.76
KRT18P28-201ENST00000453838 EIF2AK4Q9P2K8 1649 aaKnown RBP26.06■■□□□ 1.76
KRT18P28-201ENST00000453838 ALKQ9UM73 1620 aa26.06■■□□□ 1.76
KRT18P28-201ENST00000453838 TXNDC2Q86VQ3 553 aa26.06■■□□□ 1.76
KRT18P28-201ENST00000453838 MROH1Q8NDA8 1641 aa26.06■■□□□ 1.76
KRT18P28-201ENST00000453838 MAP3K1Q13233 1512 aa26.05■■□□□ 1.76
KRT18P28-201ENST00000453838 LTKP29376 864 aa26.05■■□□□ 1.76
KRT18P28-201ENST00000453838 RRP7BPQ9NSQ0 103 aa26.05■■□□□ 1.76
KRT18P28-201ENST00000453838 DUOX2Q9NRD8 1548 aa26.04■■□□□ 1.76
KRT18P28-201ENST00000453838 KIF15Q9NS87 1388 aa26.04■■□□□ 1.76
KRT18P28-201ENST00000453838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.03■■□□□ 1.76
KRT18P28-201ENST00000453838 SCAF11Q99590 1463 aaKnown RBP26.03■■□□□ 1.76
KRT18P28-201ENST00000453838 EID1Q9Y6B2 187 aa26.01■■□□□ 1.75
KRT18P28-201ENST00000453838 ARHGAP31Q2M1Z3 1444 aa25.99■■□□□ 1.75
KRT18P28-201ENST00000453838 ABCC5O15440 1437 aa25.98■■□□□ 1.75
KRT18P28-201ENST00000453838 STRCP1A6NGW2 1772 aa25.97■■□□□ 1.75
KRT18P28-201ENST00000453838 ARHGAP23Q9P227 1491 aa25.97■■□□□ 1.75
KRT18P28-201ENST00000453838 STAG3Q9UJ98 1225 aa25.96■■□□□ 1.75
KRT18P28-201ENST00000453838 ERBINQ96RT1 1412 aa25.96■■□□□ 1.75
KRT18P28-201ENST00000453838 CEP152O94986 1710 aa25.95■■□□□ 1.75
KRT18P28-201ENST00000453838 UBR1Q8IWV7 1749 aa25.95■■□□□ 1.75
KRT18P28-201ENST00000453838 SLIT1O75093 1534 aa25.95■■□□□ 1.74
KRT18P28-201ENST00000453838 APLP2Q06481 763 aa25.94■■□□□ 1.74
KRT18P28-201ENST00000453838 SYNMO15061 1565 aa25.94■■□□□ 1.74
KRT18P28-201ENST00000453838 KANK1Q14678 1352 aa25.94■■□□□ 1.74
KRT18P28-201ENST00000453838 PRDM15P57071 1507 aaPredicted RBP25.93■■□□□ 1.74
KRT18P28-201ENST00000453838 TMEM2Q9UHN6 1383 aa25.92■■□□□ 1.74
KRT18P28-201ENST00000453838 CHIC2Q9UKJ5 165 aa25.9■■□□□ 1.74
KRT18P28-201ENST00000453838 IDI1Q13907 227 aa25.89■■□□□ 1.74
KRT18P28-201ENST00000453838 DAPK1P53355 1430 aa25.89■■□□□ 1.74
KRT18P28-201ENST00000453838 CFAP65Q6ZU64 1925 aaKnown RBP25.87■■□□□ 1.73
KRT18P28-201ENST00000453838 ANKRD30AQ9BXX3 1397 aa25.86■■□□□ 1.73
KRT18P28-201ENST00000453838 PTPN23Q9H3S7 1636 aa25.85■■□□□ 1.73
KRT18P28-201ENST00000453838 FGD6Q6ZV73 1430 aa25.84■■□□□ 1.73
KRT18P28-201ENST00000453838 KCNA6P17658 529 aa25.84■■□□□ 1.73
KRT18P28-201ENST00000453838 SLC26A8Q96RN1 970 aa25.84■■□□□ 1.73
KRT18P28-201ENST00000453838 PIK3C2BO00750 1634 aa25.83■■□□□ 1.73
KRT18P28-201ENST00000453838 TMEM94Q12767 1356 aa25.82■■□□□ 1.72
KRT18P28-201ENST00000453838 EFCAB6Q5THR3 1501 aa25.81■■□□□ 1.72
KRT18P28-201ENST00000453838 PROSER2Q86WR7 435 aaPredicted RBP25.81■■□□□ 1.72
KRT18P28-201ENST00000453838 RGS17Q9UGC6 210 aaPredicted RBP25.81■■□□□ 1.72
KRT18P28-201ENST00000453838 FAM135BQ49AJ0 1406 aa25.8■■□□□ 1.72
KRT18P28-201ENST00000453838 CROCC2H7BZ55 1655 aa25.8■■□□□ 1.72
KRT18P28-201ENST00000453838 LMTK2Q8IWU2 1503 aa25.79■■□□□ 1.72
KRT18P28-201ENST00000453838 RBM33Q96EV2 1170 aaKnown RBP25.79■■□□□ 1.72
KRT18P28-201ENST00000453838 BCANQ96GW7 911 aa25.77■■□□□ 1.72
KRT18P28-201ENST00000453838 SLC52A1Q9NWF4 448 aa25.76■■□□□ 1.71
KRT18P28-201ENST00000453838 NOS1P29475 1434 aa25.75■■□□□ 1.71
KRT18P28-201ENST00000453838 TET3O43151 1660 aa25.72■■□□□ 1.71
KRT18P28-201ENST00000453838 XIRP1Q702N8 1843 aaKnown RBP25.71■■□□□ 1.71
KRT18P28-201ENST00000453838 FAM50AQ14320 339 aaKnown RBP25.7■■□□□ 1.71
KRT18P28-201ENST00000453838 KDM5AP29375 1690 aaKnown RBP25.7■■□□□ 1.7
KRT18P28-201ENST00000453838 ADGRB3O60242 1522 aa25.67■■□□□ 1.7
KRT18P28-201ENST00000453838 PPP1R15AO75807 674 aaPredicted RBP25.65■■□□□ 1.7
KRT18P28-201ENST00000453838 POTEAQ6S8J7 498 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms