RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 ZEB1P37275 1124 aaPredicted RBP18.38■□□□□ 0.53
HLA-DPA1-244ENST00000453337 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
HLA-DPA1-244ENST00000453337 YEATS2Q9ULM3 1422 aa18.38■□□□□ 0.53
HLA-DPA1-244ENST00000453337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.37■□□□□ 0.53
HLA-DPA1-244ENST00000453337 UNC13BO14795 1591 aa18.36■□□□□ 0.53
HLA-DPA1-244ENST00000453337 KDM5DQ9BY66 1539 aa18.34■□□□□ 0.53
HLA-DPA1-244ENST00000453337 KANK1Q14678 1352 aa18.34■□□□□ 0.53
HLA-DPA1-244ENST00000453337 BCORL1Q5H9F3 1711 aa18.34■□□□□ 0.53
HLA-DPA1-244ENST00000453337 REREQ9P2R6 1566 aa18.33■□□□□ 0.52
HLA-DPA1-244ENST00000453337 PZPP20742 1482 aa18.33■□□□□ 0.52
HLA-DPA1-244ENST00000453337 DEPDC5O75140 1603 aa18.32■□□□□ 0.52
HLA-DPA1-244ENST00000453337 ARHGEF40Q8TER5 1519 aa18.31■□□□□ 0.52
HLA-DPA1-244ENST00000453337 GGT6Q6P531 493 aa18.3■□□□□ 0.52
HLA-DPA1-244ENST00000453337 IQGAP3Q86VI3 1631 aa18.3■□□□□ 0.52
HLA-DPA1-244ENST00000453337 AGLP35573 1532 aa18.29■□□□□ 0.52
HLA-DPA1-244ENST00000453337 FAM135AQ9P2D6 1515 aa18.29■□□□□ 0.52
HLA-DPA1-244ENST00000453337 PKD2Q13563 968 aa18.29■□□□□ 0.52
HLA-DPA1-244ENST00000453337 RNF17Q9BXT8 1623 aaKnown RBP18.29■□□□□ 0.52
HLA-DPA1-244ENST00000453337 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
HLA-DPA1-244ENST00000453337 PRDM15P57071 1507 aaPredicted RBP18.25■□□□□ 0.51
HLA-DPA1-244ENST00000453337 VWDEQ8N2E2 1590 aa18.25■□□□□ 0.51
HLA-DPA1-244ENST00000453337 WASHC2CQ9Y4E1 1318 aa18.23■□□□□ 0.51
HLA-DPA1-244ENST00000453337 MROH1Q8NDA8 1641 aa18.23■□□□□ 0.51
HLA-DPA1-244ENST00000453337 FOXD1Q16676 465 aa18.23■□□□□ 0.51
HLA-DPA1-244ENST00000453337 ANKRD30BQ9BXX2 1392 aa18.22■□□□□ 0.51
HLA-DPA1-244ENST00000453337 ARID4BQ4LE39 1312 aaPredicted RBP18.22■□□□□ 0.51
HLA-DPA1-244ENST00000453337 TET3O43151 1660 aa18.22■□□□□ 0.51
HLA-DPA1-244ENST00000453337 LMTK2Q8IWU2 1503 aa18.2■□□□□ 0.5
HLA-DPA1-244ENST00000453337 NEUROD1Q13562 356 aa18.2■□□□□ 0.5
HLA-DPA1-244ENST00000453337 SIN3AQ96ST3 1273 aa18.2■□□□□ 0.5
HLA-DPA1-244ENST00000453337 TIMELESSQ9UNS1 1208 aa18.19■□□□□ 0.5
HLA-DPA1-244ENST00000453337 CEP152O94986 1710 aa18.18■□□□□ 0.5
HLA-DPA1-244ENST00000453337 MLECQ14165 292 aa18.17■□□□□ 0.5
HLA-DPA1-244ENST00000453337 ZC3H13Q5T200 1668 aaKnown RBP18.17■□□□□ 0.5
HLA-DPA1-244ENST00000453337 SIGLEC1Q9BZZ2 1709 aa18.17■□□□□ 0.5
HLA-DPA1-244ENST00000453337 E9PCH4 1651 aa18.16■□□□□ 0.5
HLA-DPA1-244ENST00000453337 ESF1Q9H501 851 aaKnown RBP18.16■□□□□ 0.5
HLA-DPA1-244ENST00000453337 CFAP65Q6ZU64 1925 aaKnown RBP18.15■□□□□ 0.5
HLA-DPA1-244ENST00000453337 ABCC3O15438 1527 aa18.15■□□□□ 0.5
HLA-DPA1-244ENST00000453337 RPRD2Q5VT52 1461 aaKnown RBP18.13■□□□□ 0.49
HLA-DPA1-244ENST00000453337 EFCAB6Q5THR3 1501 aa18.13■□□□□ 0.49
HLA-DPA1-244ENST00000453337 ARHGAP31Q2M1Z3 1444 aa18.12■□□□□ 0.49
HLA-DPA1-244ENST00000453337 CAMSAP1Q5T5Y3 1602 aa18.11■□□□□ 0.49
HLA-DPA1-244ENST00000453337 PTPRTO14522 1441 aa18.1■□□□□ 0.49
HLA-DPA1-244ENST00000453337 SPHKAPQ2M3C7 1700 aa18.09■□□□□ 0.49
HLA-DPA1-244ENST00000453337 TONSLQ96HA7 1378 aa18.09■□□□□ 0.49
HLA-DPA1-244ENST00000453337 PLA2R1Q13018 1463 aa18.08■□□□□ 0.49
HLA-DPA1-244ENST00000453337 CCDC144AA2RUR9 1427 aa18.08■□□□□ 0.49
HLA-DPA1-244ENST00000453337 CLTCQ00610 1675 aaKnown RBP18.08■□□□□ 0.48
HLA-DPA1-244ENST00000453337 NPATQ14207 1427 aa18.07■□□□□ 0.48
HLA-DPA1-244ENST00000453337 CNTLNQ9NXG0 1405 aa18.07■□□□□ 0.48
HLA-DPA1-244ENST00000453337 ZMYM3Q14202 1370 aa18.04■□□□□ 0.48
HLA-DPA1-244ENST00000453337 TRPM2O94759 1503 aa18.04■□□□□ 0.48
HLA-DPA1-244ENST00000453337 PPP1R15AO75807 674 aaPredicted RBP18.02■□□□□ 0.48
HLA-DPA1-244ENST00000453337 MROH2AA6NES4 1674 aa18.02■□□□□ 0.47
HLA-DPA1-244ENST00000453337 NOS1P29475 1434 aa18.01■□□□□ 0.47
HLA-DPA1-244ENST00000453337 L3MBTL2Q969R5 705 aa18.01■□□□□ 0.47
HLA-DPA1-244ENST00000453337 SLC52A1Q9NWF4 448 aa18.01■□□□□ 0.47
HLA-DPA1-244ENST00000453337 FER1L4A9Z1Z3 1794 aa18■□□□□ 0.47
HLA-DPA1-244ENST00000453337 KIF1BO60333 1816 aa18■□□□□ 0.47
HLA-DPA1-244ENST00000453337 PREX1Q8TCU6 1659 aa17.99■□□□□ 0.47
HLA-DPA1-244ENST00000453337 FBXO31Q5XUX0 539 aaPredicted RBP17.98■□□□□ 0.47
HLA-DPA1-244ENST00000453337 CLTCL1P53675 1640 aa17.98■□□□□ 0.47
HLA-DPA1-244ENST00000453337 ERVK-7P63135 1459 aa17.96■□□□□ 0.47
HLA-DPA1-244ENST00000453337 RGL3Q3MIN7 710 aa17.96■□□□□ 0.47
HLA-DPA1-244ENST00000453337 STAC3Q96MF2 364 aa17.96■□□□□ 0.47
HLA-DPA1-244ENST00000453337 NEURL4Q96JN8 1562 aa17.95■□□□□ 0.46
HLA-DPA1-244ENST00000453337 ADAMTSL3P82987 1691 aa17.94■□□□□ 0.46
HLA-DPA1-244ENST00000453337 IDI1Q13907 227 aa17.94■□□□□ 0.46
HLA-DPA1-244ENST00000453337 SYNMO15061 1565 aa17.94■□□□□ 0.46
HLA-DPA1-244ENST00000453337 SPATA31D1Q6ZQQ2 1576 aa17.93■□□□□ 0.46
HLA-DPA1-244ENST00000453337 SPATA31E1Q6ZUB1 1445 aa17.93■□□□□ 0.46
HLA-DPA1-244ENST00000453337 CHGAP10645 457 aaKnown RBP17.93■□□□□ 0.46
HLA-DPA1-244ENST00000453337 DCAF11Q8TEB1 546 aa17.93■□□□□ 0.46
HLA-DPA1-244ENST00000453337 PIK3C2BO00750 1634 aa17.93■□□□□ 0.46
HLA-DPA1-244ENST00000453337 C3P01024 1663 aa17.92■□□□□ 0.46
HLA-DPA1-244ENST00000453337 KDM2AQ9Y2K7 1162 aa17.91■□□□□ 0.46
HLA-DPA1-244ENST00000453337 UGGT1Q9NYU2 1555 aa17.91■□□□□ 0.46
HLA-DPA1-244ENST00000453337 CEBPAP49715 358 aaPredicted RBP17.9■□□□□ 0.46
HLA-DPA1-244ENST00000453337 RPGRIP1LQ68CZ1 1315 aa17.9■□□□□ 0.46
HLA-DPA1-244ENST00000453337 MADDQ8WXG6 1647 aa17.9■□□□□ 0.46
HLA-DPA1-244ENST00000453337 RIMS1Q86UR5 1692 aaKnown RBP17.9■□□□□ 0.46
HLA-DPA1-244ENST00000453337 ZNF326Q5BKZ1 582 aaKnown RBP17.89■□□□□ 0.45
HLA-DPA1-244ENST00000453337 STAG3Q9UJ98 1225 aa17.89■□□□□ 0.45
HLA-DPA1-244ENST00000453337 SETD1BQ9UPS6 1966 aaKnown RBP17.89■□□□□ 0.45
HLA-DPA1-244ENST00000453337 TNRQ92752 1358 aa17.89■□□□□ 0.45
HLA-DPA1-244ENST00000453337 ADGRB3O60242 1522 aa17.85■□□□□ 0.45
HLA-DPA1-244ENST00000453337 UHRF1BP1Q6BDS2 1440 aa17.84■□□□□ 0.45
HLA-DPA1-244ENST00000453337 NBPF8Q3BBV2 869 aa17.84■□□□□ 0.45
HLA-DPA1-244ENST00000453337 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
HLA-DPA1-244ENST00000453337 TMEM131LA2VDJ0 1609 aa17.83■□□□□ 0.45
HLA-DPA1-244ENST00000453337 NLRP1Q9C000 1473 aa17.83■□□□□ 0.45
HLA-DPA1-244ENST00000453337 MYO5BQ9ULV0 1848 aa17.83■□□□□ 0.44
HLA-DPA1-244ENST00000453337 VGFO15240 615 aaPredicted RBP17.82■□□□□ 0.44
HLA-DPA1-244ENST00000453337 KDM5AP29375 1690 aaKnown RBP17.81■□□□□ 0.44
HLA-DPA1-244ENST00000453337 HDGFP51858 240 aaKnown RBP17.81■□□□□ 0.44
HLA-DPA1-244ENST00000453337 IFT172Q9UG01 1749 aa17.8■□□□□ 0.44
HLA-DPA1-244ENST00000453337 PPLO60437 1756 aa17.79■□□□□ 0.44
HLA-DPA1-244ENST00000453337 PRAG1Q86YV5 1406 aa17.79■□□□□ 0.44
HLA-DPA1-244ENST00000453337 PTPRMP28827 1452 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms