RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 MAGI2Q86UL8 1455 aa28.09■■■□□ 2.09
PDCD2-204ENST00000453163 DCAF11Q8TEB1 546 aa28.08■■■□□ 2.09
PDCD2-204ENST00000453163 PLA2R1Q13018 1463 aa28.08■■■□□ 2.09
PDCD2-204ENST00000453163 ZFYVE16Q7Z3T8 1539 aa28.03■■■□□ 2.08
PDCD2-204ENST00000453163 CARD11Q9BXL7 1154 aa28.03■■■□□ 2.08
PDCD2-204ENST00000453163 PRKRIP1Q9H875 184 aaPredicted RBP28.03■■■□□ 2.08
PDCD2-204ENST00000453163 ABCA9Q8IUA7 1624 aa28.03■■■□□ 2.08
PDCD2-204ENST00000453163 AFAP1Q8N556 730 aa28.01■■■□□ 2.07
PDCD2-204ENST00000453163 SPAG9O60271 1321 aaKnown RBP28.01■■■□□ 2.07
PDCD2-204ENST00000453163 FANCAO15360 1455 aa28■■■□□ 2.07
PDCD2-204ENST00000453163 CCDC184Q52MB2 194 aa27.98■■■□□ 2.07
PDCD2-204ENST00000453163 RTEL1-TNFRSF6BF6WH68 1400 aa27.97■■■□□ 2.07
PDCD2-204ENST00000453163 TRPM1Q7Z4N2 1603 aa27.97■■■□□ 2.07
PDCD2-204ENST00000453163 POLR3GLQ9BT43 218 aa27.96■■■□□ 2.07
PDCD2-204ENST00000453163 ASXL2Q76L83 1435 aa27.96■■■□□ 2.07
PDCD2-204ENST00000453163 RGL3Q3MIN7 710 aa27.96■■■□□ 2.07
PDCD2-204ENST00000453163 PRAG1Q86YV5 1406 aa27.95■■■□□ 2.07
PDCD2-204ENST00000453163 A2MP01023 1474 aa27.95■■■□□ 2.06
PDCD2-204ENST00000453163 ROCK2O75116 1388 aaKnown RBP27.94■■■□□ 2.06
PDCD2-204ENST00000453163 ATP10AO60312 1499 aa27.93■■■□□ 2.06
PDCD2-204ENST00000453163 INO80Q9ULG1 1556 aaPredicted RBP27.92■■■□□ 2.06
PDCD2-204ENST00000453163 HNRNPUQ00839 825 aaKnown RBP eCLIP27.92■■■□□ 2.06
PDCD2-204ENST00000453163 ATP7AQ04656 1500 aa27.91■■■□□ 2.06
PDCD2-204ENST00000453163 DHX29Q7Z478 1369 aaKnown RBP27.91■■■□□ 2.06
PDCD2-204ENST00000453163 ARID4BQ4LE39 1312 aaPredicted RBP27.9■■■□□ 2.06
PDCD2-204ENST00000453163 ST20-MTHFSA0A0A6YYL1 179 aa27.9■■■□□ 2.06
PDCD2-204ENST00000453163 OSCARQ8IYS5 282 aa27.9■■■□□ 2.06
PDCD2-204ENST00000453163 ADGRL1O94910 1474 aa27.9■■■□□ 2.06
PDCD2-204ENST00000453163 E9PCH4 1651 aa27.9■■■□□ 2.06
PDCD2-204ENST00000453163 DEPDC5O75140 1603 aa27.88■■■□□ 2.05
PDCD2-204ENST00000453163 MRS2Q9HD23 443 aa27.86■■■□□ 2.05
PDCD2-204ENST00000453163 SCAPERQ9BY12 1400 aa27.86■■■□□ 2.05
PDCD2-204ENST00000453163 NBPF1Q3BBV0 1214 aa27.82■■■□□ 2.04
PDCD2-204ENST00000453163 FKBP8Q14318 412 aa27.8■■■□□ 2.04
PDCD2-204ENST00000453163 SPHKAPQ2M3C7 1700 aa27.8■■■□□ 2.04
PDCD2-204ENST00000453163 EIF2AK4Q9P2K8 1649 aaKnown RBP27.8■■■□□ 2.04
PDCD2-204ENST00000453163 CNGB1Q14028 1251 aaPredicted RBP27.8■■■□□ 2.04
PDCD2-204ENST00000453163 FAM9BQ8IZU0 186 aa27.8■■■□□ 2.04
PDCD2-204ENST00000453163 GPRASP1Q5JY77 1395 aa27.79■■■□□ 2.04
PDCD2-204ENST00000453163 MYT1LQ9UL68 1186 aa27.79■■■□□ 2.04
PDCD2-204ENST00000453163 LAMC1P11047 1609 aa27.79■■■□□ 2.04
PDCD2-204ENST00000453163 TET3O43151 1660 aa27.78■■■□□ 2.04
PDCD2-204ENST00000453163 TSHZ2Q9NRE2 1034 aa27.78■■■□□ 2.04
PDCD2-204ENST00000453163 TRPM2O94759 1503 aa27.78■■■□□ 2.04
PDCD2-204ENST00000453163 PRDM15P57071 1507 aaPredicted RBP27.76■■■□□ 2.04
PDCD2-204ENST00000453163 NPM1P06748 294 aaKnown RBP eCLIP27.76■■■□□ 2.03
PDCD2-204ENST00000453163 CEP152O94986 1710 aa27.75■■■□□ 2.03
PDCD2-204ENST00000453163 VWDEQ8N2E2 1590 aa27.75■■■□□ 2.03
PDCD2-204ENST00000453163 KIDINS220Q9ULH0 1771 aa27.75■■■□□ 2.03
PDCD2-204ENST00000453163 KIF3BO15066 747 aa27.73■■■□□ 2.03
PDCD2-204ENST00000453163 BCANQ96GW7 911 aa27.73■■■□□ 2.03
PDCD2-204ENST00000453163 CLTCL1P53675 1640 aa27.73■■■□□ 2.03
PDCD2-204ENST00000453163 MROH1Q8NDA8 1641 aa27.73■■■□□ 2.03
PDCD2-204ENST00000453163 PTPRTO14522 1441 aa27.72■■■□□ 2.03
PDCD2-204ENST00000453163 NEFLP07196 543 aa27.71■■■□□ 2.03
PDCD2-204ENST00000453163 RNF17Q9BXT8 1623 aaKnown RBP27.71■■■□□ 2.03
PDCD2-204ENST00000453163 KANK1Q14678 1352 aa27.71■■■□□ 2.03
PDCD2-204ENST00000453163 ZNF518AQ6AHZ1 1483 aa27.69■■■□□ 2.02
PDCD2-204ENST00000453163 MADDQ8WXG6 1647 aa27.68■■■□□ 2.02
PDCD2-204ENST00000453163 CD109Q6YHK3 1445 aa27.66■■■□□ 2.02
PDCD2-204ENST00000453163 CFAP74Q9C0B2 1584 aa27.65■■■□□ 2.02
PDCD2-204ENST00000453163 COL17A1Q9UMD9 1497 aaPredicted RBP27.65■■■□□ 2.02
PDCD2-204ENST00000453163 TESK2Q96S53 571 aa27.62■■■□□ 2.01
PDCD2-204ENST00000453163 ZBED9Q6R2W3 1325 aa27.61■■■□□ 2.01
PDCD2-204ENST00000453163 DISP3Q9P2K9 1392 aa27.61■■■□□ 2.01
PDCD2-204ENST00000453163 POGZQ7Z3K3 1410 aa27.6■■■□□ 2.01
PDCD2-204ENST00000453163 EFCAB6Q5THR3 1501 aa27.59■■■□□ 2.01
PDCD2-204ENST00000453163 UGGT1Q9NYU2 1555 aa27.58■■■□□ 2.01
PDCD2-204ENST00000453163 PPRC1Q5VV67 1664 aaKnown RBP27.58■■■□□ 2.01
PDCD2-204ENST00000453163 IQGAP1P46940 1657 aa27.57■■■□□ 2
PDCD2-204ENST00000453163 HECW2Q9P2P5 1572 aa27.55■■■□□ 2
PDCD2-204ENST00000453163 FRMPD1Q5SYB0 1578 aa27.53■■■□□ 2
PDCD2-204ENST00000453163 MLH3Q9UHC1 1453 aa27.52■■■□□ 2
PDCD2-204ENST00000453163 KTN1Q86UP2 1357 aaKnown RBP27.52■■■□□ 2
PDCD2-204ENST00000453163 KIF1BO60333 1816 aa27.52■■■□□ 2
PDCD2-204ENST00000453163 NEURL4Q96JN8 1562 aa27.51■■□□□ 1.99
PDCD2-204ENST00000453163 TMC1Q8TDI8 760 aa27.51■■□□□ 1.99
PDCD2-204ENST00000453163 MYBBP1AQ9BQG0 1328 aaKnown RBP27.51■■□□□ 1.99
PDCD2-204ENST00000453163 RALBP1Q15311 655 aa27.5■■□□□ 1.99
PDCD2-204ENST00000453163 LMTK2Q8IWU2 1503 aa27.5■■□□□ 1.99
PDCD2-204ENST00000453163 TMF1P82094 1093 aa27.5■■□□□ 1.99
PDCD2-204ENST00000453163 ANP32EQ9BTT0 268 aa27.5■■□□□ 1.99
PDCD2-204ENST00000453163 ABCA6Q8N139 1617 aa27.49■■□□□ 1.99
PDCD2-204ENST00000453163 PNISRQ8TF01 805 aaKnown RBP27.49■■□□□ 1.99
PDCD2-204ENST00000453163 PER1O15534 1290 aaPredicted RBP27.48■■□□□ 1.99
PDCD2-204ENST00000453163 STAC3Q96MF2 364 aa27.48■■□□□ 1.99
PDCD2-204ENST00000453163 MROH2AA6NES4 1674 aa27.48■■□□□ 1.99
PDCD2-204ENST00000453163 BRD4O60885 1362 aaPredicted RBP27.46■■□□□ 1.99
PDCD2-204ENST00000453163 PARD3Q8TEW0 1356 aa27.46■■□□□ 1.99
PDCD2-204ENST00000453163 IRX6P78412 446 aaPredicted RBP27.45■■□□□ 1.99
PDCD2-204ENST00000453163 KIAA1210Q9ULL0 1709 aa27.45■■□□□ 1.98
PDCD2-204ENST00000453163 SCAF11Q99590 1463 aaKnown RBP27.45■■□□□ 1.98
PDCD2-204ENST00000453163 CFAP65Q6ZU64 1925 aaKnown RBP27.45■■□□□ 1.98
PDCD2-204ENST00000453163 NEO1Q92859 1461 aa27.44■■□□□ 1.98
PDCD2-204ENST00000453163 MAP3K4Q9Y6R4 1608 aa27.44■■□□□ 1.98
PDCD2-204ENST00000453163 IFT172Q9UG01 1749 aa27.44■■□□□ 1.98
PDCD2-204ENST00000453163 PANK3Q9H999 370 aa27.42■■□□□ 1.98
PDCD2-204ENST00000453163 RAPGEF3O95398 923 aa27.41■■□□□ 1.98
PDCD2-204ENST00000453163 MYOM2P54296 1465 aa27.41■■□□□ 1.98
PDCD2-204ENST00000453163 GGT6Q6P531 493 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms