RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 ADGRL2O95490 1459 aa23.75■■□□□ 1.39
VPS8-213ENST00000453056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.75■■□□□ 1.39
VPS8-213ENST00000453056 KDM5DQ9BY66 1539 aa23.74■■□□□ 1.39
VPS8-213ENST00000453056 PREX1Q8TCU6 1659 aa23.73■■□□□ 1.39
VPS8-213ENST00000453056 RRP7BPQ9NSQ0 103 aa23.73■■□□□ 1.39
VPS8-213ENST00000453056 CHIC2Q9UKJ5 165 aa23.73■■□□□ 1.39
VPS8-213ENST00000453056 CEBPAP49715 358 aaPredicted RBP23.72■■□□□ 1.39
VPS8-213ENST00000453056 NCOA1Q15788 1441 aa23.71■■□□□ 1.39
VPS8-213ENST00000453056 ZC3H13Q5T200 1668 aaKnown RBP23.7■■□□□ 1.39
VPS8-213ENST00000453056 LMTK3Q96Q04 1460 aa23.7■■□□□ 1.38
VPS8-213ENST00000453056 ZMYM3Q14202 1370 aa23.7■■□□□ 1.38
VPS8-213ENST00000453056 RRBP1Q9P2E9 1410 aaKnown RBP23.69■■□□□ 1.38
VPS8-213ENST00000453056 NPATQ14207 1427 aa23.68■■□□□ 1.38
VPS8-213ENST00000453056 UHRF1BP1Q6BDS2 1440 aa23.67■■□□□ 1.38
VPS8-213ENST00000453056 WASHC2CQ9Y4E1 1318 aa23.66■■□□□ 1.38
VPS8-213ENST00000453056 MROH1Q8NDA8 1641 aa23.66■■□□□ 1.38
VPS8-213ENST00000453056 PRDM15P57071 1507 aaPredicted RBP23.65■■□□□ 1.38
VPS8-213ENST00000453056 ROCK1Q13464 1354 aa23.65■■□□□ 1.38
VPS8-213ENST00000453056 ABCC3O15438 1527 aa23.64■■□□□ 1.38
VPS8-213ENST00000453056 DEPDC5O75140 1603 aa23.64■■□□□ 1.38
VPS8-213ENST00000453056 PTPRKQ15262 1439 aa23.63■■□□□ 1.37
VPS8-213ENST00000453056 PZPP20742 1482 aa23.62■■□□□ 1.37
VPS8-213ENST00000453056 CEP152O94986 1710 aa23.62■■□□□ 1.37
VPS8-213ENST00000453056 ANKRD50Q9ULJ7 1429 aa23.61■■□□□ 1.37
VPS8-213ENST00000453056 ITGAEP38570 1179 aa23.61■■□□□ 1.37
VPS8-213ENST00000453056 KANK1Q14678 1352 aa23.6■■□□□ 1.37
VPS8-213ENST00000453056 CAMSAP1Q5T5Y3 1602 aa23.58■■□□□ 1.36
VPS8-213ENST00000453056 MYO3AQ8NEV4 1616 aa23.57■■□□□ 1.36
VPS8-213ENST00000453056 ZNF142P52746 1687 aaPredicted RBP23.54■■□□□ 1.36
VPS8-213ENST00000453056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.54■■□□□ 1.36
VPS8-213ENST00000453056 HSPA2P54652 639 aa23.53■■□□□ 1.36
VPS8-213ENST00000453056 TNRQ92752 1358 aa23.52■■□□□ 1.36
VPS8-213ENST00000453056 VWDEQ8N2E2 1590 aa23.51■■□□□ 1.35
VPS8-213ENST00000453056 CEP170BQ9Y4F5 1589 aaPredicted RBP23.51■■□□□ 1.35
VPS8-213ENST00000453056 UNC13BO14795 1591 aa23.5■■□□□ 1.35
VPS8-213ENST00000453056 CFAP65Q6ZU64 1925 aaKnown RBP23.5■■□□□ 1.35
VPS8-213ENST00000453056 LMTK2Q8IWU2 1503 aa23.49■■□□□ 1.35
VPS8-213ENST00000453056 ARHGAP31Q2M1Z3 1444 aa23.48■■□□□ 1.35
VPS8-213ENST00000453056 ERVK-7P63135 1459 aa23.48■■□□□ 1.35
VPS8-213ENST00000453056 SPATA31D1Q6ZQQ2 1576 aa23.48■■□□□ 1.35
VPS8-213ENST00000453056 A2ML1A8K2U0 1454 aa23.46■■□□□ 1.35
VPS8-213ENST00000453056 FBXO31Q5XUX0 539 aaPredicted RBP23.46■■□□□ 1.35
VPS8-213ENST00000453056 GCC2Q8IWJ2 1684 aa23.46■■□□□ 1.35
VPS8-213ENST00000453056 EFCAB6Q5THR3 1501 aa23.45■■□□□ 1.34
VPS8-213ENST00000453056 NLRP1Q9C000 1473 aa23.45■■□□□ 1.34
VPS8-213ENST00000453056 TET3O43151 1660 aa23.43■■□□□ 1.34
VPS8-213ENST00000453056 IQGAP3Q86VI3 1631 aa23.41■■□□□ 1.34
VPS8-213ENST00000453056 STRCQ7RTU9 1775 aa23.4■■□□□ 1.34
VPS8-213ENST00000453056 HFM1A2PYH4 1435 aa23.39■■□□□ 1.33
VPS8-213ENST00000453056 NAIPQ13075 1403 aa23.39■■□□□ 1.33
VPS8-213ENST00000453056 PLA2R1Q13018 1463 aa23.38■■□□□ 1.33
VPS8-213ENST00000453056 RPRD2Q5VT52 1461 aaKnown RBP23.38■■□□□ 1.33
VPS8-213ENST00000453056 DMRT2Q9Y5R5 561 aa23.35■■□□□ 1.33
VPS8-213ENST00000453056 NUP155O75694 1391 aa23.35■■□□□ 1.33
VPS8-213ENST00000453056 UGGT1Q9NYU2 1555 aa23.35■■□□□ 1.33
VPS8-213ENST00000453056 POLR1AO95602 1720 aaPredicted RBP23.3■■□□□ 1.32
VPS8-213ENST00000453056 PKD2Q13563 968 aa23.3■■□□□ 1.32
VPS8-213ENST00000453056 NOS1P29475 1434 aa23.3■■□□□ 1.32
VPS8-213ENST00000453056 E9PCH4 1651 aa23.29■■□□□ 1.32
VPS8-213ENST00000453056 PTPRTO14522 1441 aa23.29■■□□□ 1.32
VPS8-213ENST00000453056 SYNMO15061 1565 aa23.29■■□□□ 1.32
VPS8-213ENST00000453056 ILDR1Q86SU0 546 aaPredicted RBP23.29■■□□□ 1.32
VPS8-213ENST00000453056 THEMISQ8N1K5 641 aaPredicted RBP23.29■■□□□ 1.32
VPS8-213ENST00000453056 UBR1Q8IWV7 1749 aa23.28■■□□□ 1.32
VPS8-213ENST00000453056 PIK3C2BO00750 1634 aa23.26■■□□□ 1.31
VPS8-213ENST00000453056 KDM5AP29375 1690 aaKnown RBP23.26■■□□□ 1.31
VPS8-213ENST00000453056 NCKAP5LQ9HCH0 1330 aa23.23■■□□□ 1.31
VPS8-213ENST00000453056 SLC52A1Q9NWF4 448 aa23.22■■□□□ 1.31
VPS8-213ENST00000453056 STAG3Q9UJ98 1225 aa23.22■■□□□ 1.31
VPS8-213ENST00000453056 ADGRB3O60242 1522 aa23.22■■□□□ 1.31
VPS8-213ENST00000453056 ANKLE2Q86XL3 938 aa23.21■■□□□ 1.31
VPS8-213ENST00000453056 TRIM52Q96A61 297 aa23.21■■□□□ 1.31
VPS8-213ENST00000453056 SPHKAPQ2M3C7 1700 aa23.19■■□□□ 1.3
VPS8-213ENST00000453056 NEURL4Q96JN8 1562 aa23.18■■□□□ 1.3
VPS8-213ENST00000453056 IDI1Q13907 227 aa23.18■■□□□ 1.3
VPS8-213ENST00000453056 SLIT1O75093 1534 aa23.18■■□□□ 1.3
VPS8-213ENST00000453056 ACIN1Q9UKV3 1341 aaKnown RBP23.17■■□□□ 1.3
VPS8-213ENST00000453056 ARHGAP23Q9P227 1491 aa23.16■■□□□ 1.3
VPS8-213ENST00000453056 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
VPS8-213ENST00000453056 SCAF11Q99590 1463 aaKnown RBP23.15■■□□□ 1.3
VPS8-213ENST00000453056 IQGAP1P46940 1657 aa23.14■■□□□ 1.29
VPS8-213ENST00000453056 NPHP4O75161 1426 aaPredicted RBP23.14■■□□□ 1.29
VPS8-213ENST00000453056 TMEM2Q9UHN6 1383 aa23.14■■□□□ 1.29
VPS8-213ENST00000453056 MYO5BQ9ULV0 1848 aa23.13■■□□□ 1.29
VPS8-213ENST00000453056 MED14O60244 1454 aa23.13■■□□□ 1.29
VPS8-213ENST00000453056 SLC4A1APQ9BWU0 796 aaKnown RBP23.12■■□□□ 1.29
VPS8-213ENST00000453056 EID1Q9Y6B2 187 aa23.12■■□□□ 1.29
VPS8-213ENST00000453056 TMEM131LA2VDJ0 1609 aa23.11■■□□□ 1.29
VPS8-213ENST00000453056 TRPM2O94759 1503 aa23.1■■□□□ 1.29
VPS8-213ENST00000453056 TXNDC2Q86VQ3 553 aa23.08■■□□□ 1.29
VPS8-213ENST00000453056 RAB3GAP2Q9H2M9 1393 aa23.06■■□□□ 1.28
VPS8-213ENST00000453056 CHGAP10645 457 aaKnown RBP23.06■■□□□ 1.28
VPS8-213ENST00000453056 CLTCL1P53675 1640 aa23.04■■□□□ 1.28
VPS8-213ENST00000453056 LTKP29376 864 aa23.03■■□□□ 1.28
VPS8-213ENST00000453056 LTBP4Q8N2S1 1624 aa23.03■■□□□ 1.28
VPS8-213ENST00000453056 KIF1BO60333 1816 aa23.03■■□□□ 1.28
VPS8-213ENST00000453056 RIMS2Q9UQ26 1411 aa23.02■■□□□ 1.28
VPS8-213ENST00000453056 HDGFP51858 240 aaKnown RBP23.02■■□□□ 1.28
VPS8-213ENST00000453056 CERKQ8TCT0 537 aa23.02■■□□□ 1.28
VPS8-213ENST00000453056 ZNF335Q9H4Z2 1342 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms