RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 FAM9BQ8IZU0 186 aa6.62□□□□□ -1.35
EPHA3-202ENST00000452448 NCAPD3P42695 1498 aa6.62□□□□□ -1.35
EPHA3-202ENST00000452448 PHF14O94880 888 aa6.61□□□□□ -1.35
EPHA3-202ENST00000452448 FAM212AQ96EL1 285 aa6.61□□□□□ -1.35
EPHA3-202ENST00000452448 HDAC5Q9UQL6 1122 aa6.61□□□□□ -1.35
EPHA3-202ENST00000452448 C11orf95C9JLR9 678 aaPredicted RBP6.6□□□□□ -1.35
EPHA3-202ENST00000452448 PPP1R37O75864 691 aa6.6□□□□□ -1.35
EPHA3-202ENST00000452448 IRX3P78415 501 aaPredicted RBP6.59□□□□□ -1.35
EPHA3-202ENST00000452448 DIEXFQ68CQ4 756 aaKnown RBP6.59□□□□□ -1.35
EPHA3-202ENST00000452448 KCNV2Q8TDN2 545 aa6.59□□□□□ -1.35
EPHA3-202ENST00000452448 VGFO15240 615 aaPredicted RBP6.59□□□□□ -1.35
EPHA3-202ENST00000452448 SLC52A1Q9NWF4 448 aa6.59□□□□□ -1.35
EPHA3-202ENST00000452448 TRPC6Q9Y210 931 aa6.59□□□□□ -1.35
EPHA3-202ENST00000452448 SCRIBQ14160 1630 aa6.59□□□□□ -1.35
EPHA3-202ENST00000452448 APPP05067 770 aa6.58□□□□□ -1.36
EPHA3-202ENST00000452448 MMP14P50281 582 aa6.58□□□□□ -1.36
EPHA3-202ENST00000452448 WDR70Q9NW82 654 aa6.58□□□□□ -1.36
EPHA3-202ENST00000452448 ZBTB47Q9UFB7 747 aaPredicted RBP6.58□□□□□ -1.36
EPHA3-202ENST00000452448 PLEKHD1A6NEE1 506 aa6.58□□□□□ -1.36
EPHA3-202ENST00000452448 THOC2Q8NI27 1593 aaKnown RBP6.58□□□□□ -1.36
EPHA3-202ENST00000452448 CDCA8Q53HL2 280 aa6.57□□□□□ -1.36
EPHA3-202ENST00000452448 PRKAR2AP13861 404 aaKnown RBP6.57□□□□□ -1.36
EPHA3-202ENST00000452448 P3H3Q8IVL6 736 aa6.57□□□□□ -1.36
EPHA3-202ENST00000452448 FARP1Q9Y4F1 1045 aaPredicted RBP6.57□□□□□ -1.36
EPHA3-202ENST00000452448 VGLL3A8MV65 326 aa6.56□□□□□ -1.36
EPHA3-202ENST00000452448 GSE1Q14687 1217 aa6.56□□□□□ -1.36
EPHA3-202ENST00000452448 TMEM51Q9NW97 253 aa6.56□□□□□ -1.36
EPHA3-202ENST00000452448 TMTC2Q8N394 836 aa6.56□□□□□ -1.36
EPHA3-202ENST00000452448 LAS1LQ9Y4W2 734 aaKnown RBP6.56□□□□□ -1.36
EPHA3-202ENST00000452448 AXDND1Q5T1B0 1012 aaPredicted RBP6.55□□□□□ -1.36
EPHA3-202ENST00000452448 IFNL1Q8IU54 200 aa6.55□□□□□ -1.36
EPHA3-202ENST00000452448 RBM42Q9BTD8 480 aaKnown RBP6.55□□□□□ -1.36
EPHA3-202ENST00000452448 CCDC61Q9Y6R9 512 aa6.55□□□□□ -1.36
EPHA3-202ENST00000452448 HSP90AA1P07900 732 aaKnown RBP6.55□□□□□ -1.36
EPHA3-202ENST00000452448 LAMC3Q9Y6N6 1575 aa6.54□□□□□ -1.36
EPHA3-202ENST00000452448 MFRPQ9BY79 579 aa6.54□□□□□ -1.36
EPHA3-202ENST00000452448 PDS5BQ9NTI5 1447 aa6.54□□□□□ -1.36
EPHA3-202ENST00000452448 MAP3K13O43283 966 aa6.54□□□□□ -1.36
EPHA3-202ENST00000452448 CLUAP1Q96AJ1 413 aa6.54□□□□□ -1.36
EPHA3-202ENST00000452448 ZNF316A6NFI3 1004 aaPredicted RBP6.53□□□□□ -1.36
EPHA3-202ENST00000452448 HSP90AB4PQ58FF6 505 aa6.53□□□□□ -1.36
EPHA3-202ENST00000452448 CCER1Q8TC90 406 aaPredicted RBP6.53□□□□□ -1.36
EPHA3-202ENST00000452448 HMGXB3Q12766 1538 aa6.53□□□□□ -1.36
EPHA3-202ENST00000452448 IRF5Q13568 498 aa6.53□□□□□ -1.36
EPHA3-202ENST00000452448 FOXD4L6Q3SYB3 417 aaPredicted RBP6.53□□□□□ -1.36
EPHA3-202ENST00000452448 FOXD4L3Q6VB84 417 aaPredicted RBP6.53□□□□□ -1.36
EPHA3-202ENST00000452448 SGSM3Q96HU1 749 aa6.53□□□□□ -1.36
EPHA3-202ENST00000452448 RETREG2Q8NC44 543 aa6.52□□□□□ -1.37
EPHA3-202ENST00000452448 FBXW7Q969H0 707 aa6.52□□□□□ -1.37
EPHA3-202ENST00000452448 CENPJQ9HC77 1338 aaPredicted RBP6.52□□□□□ -1.37
EPHA3-202ENST00000452448 PSEN1P49768 467 aa6.52□□□□□ -1.37
EPHA3-202ENST00000452448 ANP32BQ92688 251 aaKnown RBP6.52□□□□□ -1.37
EPHA3-202ENST00000452448 BAZ1AQ9NRL2 1556 aaPredicted RBP6.52□□□□□ -1.37
EPHA3-202ENST00000452448 RSF1Q96T23 1441 aaPredicted RBP6.51□□□□□ -1.37
EPHA3-202ENST00000452448 PHF12Q96QT6 1004 aa6.51□□□□□ -1.37
EPHA3-202ENST00000452448 SH3BP1Q9Y3L3 701 aa6.51□□□□□ -1.37
EPHA3-202ENST00000452448 EXOC8Q8IYI6 725 aa6.5□□□□□ -1.37
EPHA3-202ENST00000452448 FAM43AQ8N2R8 423 aa6.5□□□□□ -1.37
EPHA3-202ENST00000452448 LOC102724159A0A0B4J2E5 919 aa6.5□□□□□ -1.37
EPHA3-202ENST00000452448 PWP2Q15269 919 aaKnown RBP6.5□□□□□ -1.37
EPHA3-202ENST00000452448 SMARCA2P51531 1590 aa6.5□□□□□ -1.37
EPHA3-202ENST00000452448 TRAK2O60296 914 aa6.49□□□□□ -1.37
EPHA3-202ENST00000452448 PIP4P2Q8N4L2 257 aa6.49□□□□□ -1.37
EPHA3-202ENST00000452448 MPNDQ8N594 471 aa6.49□□□□□ -1.37
EPHA3-202ENST00000452448 EFCAB3Q8N7B9 438 aa6.49□□□□□ -1.37
EPHA3-202ENST00000452448 ZMYND10O75800 440 aa6.49□□□□□ -1.37
EPHA3-202ENST00000452448 CC2D1BQ5T0F9 858 aaKnown RBP6.49□□□□□ -1.37
EPHA3-202ENST00000452448 KDM4CQ9H3R0 1056 aa6.49□□□□□ -1.37
EPHA3-202ENST00000452448 PHF8Q9UPP1 1060 aa6.49□□□□□ -1.37
EPHA3-202ENST00000452448 CCDC125Q86Z20 511 aa6.48□□□□□ -1.37
EPHA3-202ENST00000452448 CABP2Q9NPB3 220 aa6.48□□□□□ -1.37
EPHA3-202ENST00000452448 EGFL6Q8IUX8 553 aa6.48□□□□□ -1.37
EPHA3-202ENST00000452448 SEMA3FQ13275 785 aa6.47□□□□□ -1.37
EPHA3-202ENST00000452448 NBPF11Q86T75 865 aa6.47□□□□□ -1.37
EPHA3-202ENST00000452448 WASHC2CQ9Y4E1 1318 aa6.47□□□□□ -1.37
EPHA3-202ENST00000452448 MRC2Q9UBG0 1479 aa6.46□□□□□ -1.37
EPHA3-202ENST00000452448 TTC36A6NLP5 189 aa6.46□□□□□ -1.37
EPHA3-202ENST00000452448 NBPF1Q3BBV0 1214 aa6.46□□□□□ -1.37
EPHA3-202ENST00000452448 NBPF20Q3BBV1 942 aa6.46□□□□□ -1.37
EPHA3-202ENST00000452448 CARD10Q9BWT7 1032 aa6.46□□□□□ -1.37
EPHA3-202ENST00000452448 ZNF777Q9ULD5 760 aaPredicted RBP6.46□□□□□ -1.37
EPHA3-202ENST00000452448 BRD1O95696 1058 aa6.46□□□□□ -1.38
EPHA3-202ENST00000452448 EVX2Q03828 476 aa6.46□□□□□ -1.38
EPHA3-202ENST00000452448 CHRDL2Q6WN34 429 aa6.46□□□□□ -1.38
EPHA3-202ENST00000452448 WDR62O43379 1518 aa6.46□□□□□ -1.38
EPHA3-202ENST00000452448 RIMBP3CA6NJZ7 1639 aa6.45□□□□□ -1.38
EPHA3-202ENST00000452448 RIMBP3BA6NNM3 1639 aa6.45□□□□□ -1.38
EPHA3-202ENST00000452448 RIMBP3Q9UFD9 1639 aa6.45□□□□□ -1.38
EPHA3-202ENST00000452448 BARGINQ6ZT62 677 aa6.45□□□□□ -1.38
EPHA3-202ENST00000452448 MS4A4AQ96JQ5 239 aa6.45□□□□□ -1.38
EPHA3-202ENST00000452448 CADPSQ9ULU8 1353 aa6.45□□□□□ -1.38
EPHA3-202ENST00000452448 IRF6O14896 467 aa6.45□□□□□ -1.38
EPHA3-202ENST00000452448 FXR2P51116 673 aaKnown RBP eCLIP6.44□□□□□ -1.38
EPHA3-202ENST00000452448 SPTY2D1Q68D10 685 aaPredicted RBP6.44□□□□□ -1.38
EPHA3-202ENST00000452448 NGEFQ8N5V2 710 aa6.44□□□□□ -1.38
EPHA3-202ENST00000452448 RIPOR2Q9Y4F9 1068 aa6.44□□□□□ -1.38
EPHA3-202ENST00000452448 SEMA3EO15041 775 aa6.44□□□□□ -1.38
EPHA3-202ENST00000452448 RINLQ6ZS11 566 aa6.44□□□□□ -1.38
EPHA3-202ENST00000452448 CEP120Q8N960 986 aa6.44□□□□□ -1.38
EPHA3-202ENST00000452448 ATAD2BQ9ULI0 1458 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms