RNA–Protein interactions for RNA: ENST00000451903.2

CPS1-204, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 4,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-204ENST00000451903 B4GALNT3Q6L9W6 998 aa7.96□□□□□ -1.13
CPS1-204ENST00000451903 ESPNB1AK53 854 aa7.96□□□□□ -1.14
CPS1-204ENST00000451903 PDCL2Q8N4E4 241 aa7.96□□□□□ -1.14
CPS1-204ENST00000451903 ISY1Q9ULR0 285 aaKnown RBP7.96□□□□□ -1.14
CPS1-204ENST00000451903 CCDC91Q7Z6B0 441 aa7.96□□□□□ -1.14
CPS1-204ENST00000451903 NFKBIBQ15653 356 aa7.95□□□□□ -1.14
CPS1-204ENST00000451903 GBP4Q96PP9 640 aa7.95□□□□□ -1.14
CPS1-204ENST00000451903 LRCH2Q5VUJ6 765 aa7.95□□□□□ -1.14
CPS1-204ENST00000451903 P3H3Q8IVL6 736 aa7.95□□□□□ -1.14
CPS1-204ENST00000451903 UQCRHLA0A096LP55 91 aa7.94□□□□□ -1.14
CPS1-204ENST00000451903 UQCRHP07919 91 aa7.94□□□□□ -1.14
CPS1-204ENST00000451903 DIAPH3Q9NSV4 1193 aa7.94□□□□□ -1.14
CPS1-204ENST00000451903 VGFO15240 615 aaPredicted RBP7.94□□□□□ -1.14
CPS1-204ENST00000451903 ZRSR1Q15695 479 aaKnown RBP7.94□□□□□ -1.14
CPS1-204ENST00000451903 NBPF1Q3BBV0 1214 aa7.94□□□□□ -1.14
CPS1-204ENST00000451903 CERS3Q8IU89 383 aa7.94□□□□□ -1.14
CPS1-204ENST00000451903 GZF1Q9H116 711 aaPredicted RBP7.94□□□□□ -1.14
CPS1-204ENST00000451903 HIRIP3Q9BW71 556 aaPredicted RBP7.94□□□□□ -1.14
CPS1-204ENST00000451903 CCDC34Q96HJ3 373 aa7.93□□□□□ -1.14
CPS1-204ENST00000451903 GOLGA6L19H0YKK7 550 aa7.93□□□□□ -1.14
CPS1-204ENST00000451903 TPM3P06753 285 aa7.93□□□□□ -1.14
CPS1-204ENST00000451903 DDX11L8A8MPP1 907 aa7.93□□□□□ -1.14
CPS1-204ENST00000451903 GTF2E1P29083 439 aaPredicted RBP7.93□□□□□ -1.14
CPS1-204ENST00000451903 ARMCX6Q7L4S7 300 aa7.93□□□□□ -1.14
CPS1-204ENST00000451903 TTC36A6NLP5 189 aa7.93□□□□□ -1.14
CPS1-204ENST00000451903 SLC26A8Q96RN1 970 aa7.93□□□□□ -1.14
CPS1-204ENST00000451903 PLEKHD1A6NEE1 506 aa7.92□□□□□ -1.14
CPS1-204ENST00000451903 DYNC1I1O14576 645 aa7.92□□□□□ -1.14
CPS1-204ENST00000451903 CPSF2Q9P2I0 782 aaKnown RBP7.92□□□□□ -1.14
CPS1-204ENST00000451903 NBPF6Q5VWK0 638 aa7.92□□□□□ -1.14
CPS1-204ENST00000451903 NBPF5PQ86XG9 351 aaPredicted RBP7.92□□□□□ -1.14
CPS1-204ENST00000451903 NBPF4Q96M43 638 aa7.92□□□□□ -1.14
CPS1-204ENST00000451903 CT47A1Q5JQC4 288 aaPredicted RBP7.91□□□□□ -1.14
CPS1-204ENST00000451903 SKOR2Q2VWA4 1001 aaPredicted RBP7.91□□□□□ -1.14
CPS1-204ENST00000451903 GOLGA6L10A6NI86 522 aa7.91□□□□□ -1.14
CPS1-204ENST00000451903 CCDC94Q9BW85 323 aaPredicted RBP7.9□□□□□ -1.14
CPS1-204ENST00000451903 KCTD17Q8N5Z5 321 aa7.9□□□□□ -1.14
CPS1-204ENST00000451903 CBX1P83916 185 aa7.9□□□□□ -1.15
CPS1-204ENST00000451903 GORABQ5T7V8 394 aa7.9□□□□□ -1.15
CPS1-204ENST00000451903 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.9□□□□□ -1.15
CPS1-204ENST00000451903 HSPA5P11021 654 aaKnown RBP7.89□□□□□ -1.15
CPS1-204ENST00000451903 PAK3O75914 559 aaPredicted RBP7.89□□□□□ -1.15
CPS1-204ENST00000451903 ZNF853P0CG23 659 aa7.89□□□□□ -1.15
CPS1-204ENST00000451903 EFCC1Q9HA90 598 aa7.88□□□□□ -1.15
CPS1-204ENST00000451903 LEKR1Q6ZMV7 388 aa7.88□□□□□ -1.15
CPS1-204ENST00000451903 AK7Q96M32 723 aa7.88□□□□□ -1.15
CPS1-204ENST00000451903 WASHC2CQ9Y4E1 1318 aa7.88□□□□□ -1.15
CPS1-204ENST00000451903 CCDC173Q0VFZ6 552 aa7.88□□□□□ -1.15
CPS1-204ENST00000451903 DYDC1Q8WWB3 177 aa7.88□□□□□ -1.15
CPS1-204ENST00000451903 MYCNP04198 464 aaPredicted RBP7.87□□□□□ -1.15
CPS1-204ENST00000451903 DMTNQ08495 405 aa7.87□□□□□ -1.15
CPS1-204ENST00000451903 IGSF3O75054 1194 aa7.87□□□□□ -1.15
CPS1-204ENST00000451903 NUCKS1Q9H1E3 243 aaKnown RBP7.87□□□□□ -1.15
CPS1-204ENST00000451903 GOLGA6L4A6NEF3 574 aa7.87□□□□□ -1.15
CPS1-204ENST00000451903 DDX10Q13206 875 aaKnown RBP7.87□□□□□ -1.15
CPS1-204ENST00000451903 PIK3R5Q8WYR1 880 aa7.87□□□□□ -1.15
CPS1-204ENST00000451903 PPP1R1BQ9UD71 204 aaPredicted RBP7.87□□□□□ -1.15
CPS1-204ENST00000451903 SATB1Q01826 763 aa7.87□□□□□ -1.15
CPS1-204ENST00000451903 GRIPAP1Q4V328 841 aa7.87□□□□□ -1.15
CPS1-204ENST00000451903 SMC4Q9NTJ3 1288 aa7.87□□□□□ -1.15
CPS1-204ENST00000451903 RGS22Q8NE09 1264 aa7.86□□□□□ -1.15
CPS1-204ENST00000451903 RASSF4Q9H2L5 321 aa7.86□□□□□ -1.15
CPS1-204ENST00000451903 CHMP3Q9Y3E7 222 aa7.86□□□□□ -1.15
CPS1-204ENST00000451903 POLD1P28340 1107 aa7.86□□□□□ -1.15
CPS1-204ENST00000451903 CFAP53Q96M91 514 aa7.86□□□□□ -1.15
CPS1-204ENST00000451903 AP1ARQ63HQ0 302 aa7.86□□□□□ -1.15
CPS1-204ENST00000451903 SASS6Q6UVJ0 657 aa7.86□□□□□ -1.15
CPS1-204ENST00000451903 ARGLU1Q9NWB6 273 aaPredicted RBP7.86□□□□□ -1.15
CPS1-204ENST00000451903 CCDC27Q2M243 656 aa7.86□□□□□ -1.15
CPS1-204ENST00000451903 DZIP1Q86YF9 867 aaKnown RBP7.86□□□□□ -1.15
CPS1-204ENST00000451903 CCER2I3L3R5 266 aa7.85□□□□□ -1.15
CPS1-204ENST00000451903 NBPF20Q3BBV1 942 aa7.85□□□□□ -1.15
CPS1-204ENST00000451903 CCDC39Q9UFE4 941 aa7.85□□□□□ -1.15
CPS1-204ENST00000451903 TPM4P67936 248 aa7.85□□□□□ -1.15
CPS1-204ENST00000451903 RBM26Q5T8P6 1007 aaKnown RBP7.85□□□□□ -1.15
CPS1-204ENST00000451903 ZSCAN30Q86W11 494 aa7.85□□□□□ -1.15
CPS1-204ENST00000451903 ERICH4A6NGS2 130 aa7.84□□□□□ -1.15
CPS1-204ENST00000451903 KIF1CO43896 1103 aaKnown RBP7.84□□□□□ -1.15
CPS1-204ENST00000451903 TERF1P54274 439 aa7.84□□□□□ -1.15
CPS1-204ENST00000451903 SH3BGRP55822 239 aaPredicted RBP7.84□□□□□ -1.15
CPS1-204ENST00000451903 HSCBQ8IWL3 235 aa7.84□□□□□ -1.15
CPS1-204ENST00000451903 ANKRD20A12PQ8NF67 263 aa7.84□□□□□ -1.15
CPS1-204ENST00000451903 MAP2K1Q02750 393 aaPredicted RBP7.84□□□□□ -1.15
CPS1-204ENST00000451903 SEPT14Q6ZU15 432 aa7.84□□□□□ -1.15
CPS1-204ENST00000451903 KIAA1328Q86T90 577 aa7.84□□□□□ -1.15
CPS1-204ENST00000451903 MFAP1P55081 439 aaKnown RBP7.84□□□□□ -1.15
CPS1-204ENST00000451903 FAM107BQ9H098 131 aa7.84□□□□□ -1.15
CPS1-204ENST00000451903 WASHC2AQ641Q2 1341 aa7.84□□□□□ -1.15
CPS1-204ENST00000451903 NBPF9Q3BBW0 867 aa7.83□□□□□ -1.16
CPS1-204ENST00000451903 NBPF11Q86T75 865 aa7.83□□□□□ -1.16
CPS1-204ENST00000451903 SYAP1Q96A49 352 aaPredicted RBP7.83□□□□□ -1.16
CPS1-204ENST00000451903 CEP83Q9Y592 693 aa7.83□□□□□ -1.16
CPS1-204ENST00000451903 MS4A1P11836 297 aa7.83□□□□□ -1.16
CPS1-204ENST00000451903 ZNF513Q8N8E2 541 aaPredicted RBP7.83□□□□□ -1.16
CPS1-204ENST00000451903 EEA1Q15075 1411 aa7.83□□□□□ -1.16
CPS1-204ENST00000451903 HSP90AB1P08238 724 aaKnown RBP7.83□□□□□ -1.16
CPS1-204ENST00000451903 YY1AP1Q9H869 796 aa7.83□□□□□ -1.16
CPS1-204ENST00000451903 IPO7O95373 1038 aaKnown RBP7.83□□□□□ -1.16
CPS1-204ENST00000451903 TPM1P09493 284 aa7.83□□□□□ -1.16
CPS1-204ENST00000451903 RPAINQ86UA6 219 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms