RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 PPP6R1Q9UPN7 881 aa25.94■■□□□ 1.74
RPUSD3-209ENST00000451405 ARHGEF5Q12774 1597 aa25.9■■□□□ 1.74
RPUSD3-209ENST00000451405 KIF3BO15066 747 aa25.89■■□□□ 1.74
RPUSD3-209ENST00000451405 TSPY4P0CV99 314 aa25.89■■□□□ 1.74
RPUSD3-209ENST00000451405 TSPY10P0CW01 314 aa25.89■■□□□ 1.74
RPUSD3-209ENST00000451405 PIP4K2BP78356 416 aa25.89■■□□□ 1.74
RPUSD3-209ENST00000451405 PLA2R1Q13018 1463 aa25.88■■□□□ 1.73
RPUSD3-209ENST00000451405 PTPRKQ15262 1439 aa25.87■■□□□ 1.73
RPUSD3-209ENST00000451405 TOM1O60784 492 aa25.86■■□□□ 1.73
RPUSD3-209ENST00000451405 HSPA1LP34931 641 aa25.85■■□□□ 1.73
RPUSD3-209ENST00000451405 MYOM3Q5VTT5 1437 aa25.85■■□□□ 1.73
RPUSD3-209ENST00000451405 MIA2Q96PC5 1412 aa25.83■■□□□ 1.73
RPUSD3-209ENST00000451405 TCOF1Q13428 1488 aaKnown RBP25.82■■□□□ 1.72
RPUSD3-209ENST00000451405 APLP2Q06481 763 aa25.81■■□□□ 1.72
RPUSD3-209ENST00000451405 CEP170BQ9Y4F5 1589 aaPredicted RBP25.81■■□□□ 1.72
RPUSD3-209ENST00000451405 MYO3AQ8NEV4 1616 aa25.79■■□□□ 1.72
RPUSD3-209ENST00000451405 FBXO31Q5XUX0 539 aaPredicted RBP25.79■■□□□ 1.72
RPUSD3-209ENST00000451405 PHF23Q9BUL5 403 aaPredicted RBP25.77■■□□□ 1.72
RPUSD3-209ENST00000451405 MAST1Q9Y2H9 1570 aa25.77■■□□□ 1.72
RPUSD3-209ENST00000451405 WASHC2CQ9Y4E1 1318 aa25.76■■□□□ 1.71
RPUSD3-209ENST00000451405 ZNF142P52746 1687 aaPredicted RBP25.75■■□□□ 1.71
RPUSD3-209ENST00000451405 A2ML1A8K2U0 1454 aa25.73■■□□□ 1.71
RPUSD3-209ENST00000451405 KDM5DQ9BY66 1539 aa25.72■■□□□ 1.71
RPUSD3-209ENST00000451405 ANKLE2Q86XL3 938 aa25.71■■□□□ 1.71
RPUSD3-209ENST00000451405 PTPN23Q9H3S7 1636 aa25.68■■□□□ 1.7
RPUSD3-209ENST00000451405 ABCC5O15440 1437 aa25.68■■□□□ 1.7
RPUSD3-209ENST00000451405 MED1Q15648 1581 aaPredicted RBP25.68■■□□□ 1.7
RPUSD3-209ENST00000451405 TNRQ92752 1358 aa25.68■■□□□ 1.7
RPUSD3-209ENST00000451405 CPS1P31327 1500 aa25.68■■□□□ 1.7
RPUSD3-209ENST00000451405 PZPP20742 1482 aa25.67■■□□□ 1.7
RPUSD3-209ENST00000451405 SHANK2Q9UPX8 1470 aa25.67■■□□□ 1.7
RPUSD3-209ENST00000451405 FAM135AQ9P2D6 1515 aa25.67■■□□□ 1.7
RPUSD3-209ENST00000451405 THEMISQ8N1K5 641 aaPredicted RBP25.66■■□□□ 1.7
RPUSD3-209ENST00000451405 FGD6Q6ZV73 1430 aa25.65■■□□□ 1.7
RPUSD3-209ENST00000451405 DNMT1P26358 1616 aaKnown RBP25.65■■□□□ 1.7
RPUSD3-209ENST00000451405 RNF17Q9BXT8 1623 aaKnown RBP25.64■■□□□ 1.7
RPUSD3-209ENST00000451405 SENP3Q9H4L4 574 aaPredicted RBP25.64■■□□□ 1.7
RPUSD3-209ENST00000451405 RRP7BPQ9NSQ0 103 aa25.64■■□□□ 1.7
RPUSD3-209ENST00000451405 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.61■■□□□ 1.69
RPUSD3-209ENST00000451405 EIF2AK4Q9P2K8 1649 aaKnown RBP25.61■■□□□ 1.69
RPUSD3-209ENST00000451405 DUOX2Q9NRD8 1548 aa25.61■■□□□ 1.69
RPUSD3-209ENST00000451405 DAPK1P53355 1430 aa25.61■■□□□ 1.69
RPUSD3-209ENST00000451405 MROH1Q8NDA8 1641 aa25.6■■□□□ 1.69
RPUSD3-209ENST00000451405 ABCC3O15438 1527 aa25.6■■□□□ 1.69
RPUSD3-209ENST00000451405 CROCC2H7BZ55 1655 aa25.6■■□□□ 1.69
RPUSD3-209ENST00000451405 KIF15Q9NS87 1388 aa25.59■■□□□ 1.69
RPUSD3-209ENST00000451405 CHIC2Q9UKJ5 165 aa25.59■■□□□ 1.69
RPUSD3-209ENST00000451405 CEP152O94986 1710 aa25.54■■□□□ 1.68
RPUSD3-209ENST00000451405 NPHP4O75161 1426 aaPredicted RBP25.54■■□□□ 1.68
RPUSD3-209ENST00000451405 NEURL4Q96JN8 1562 aa25.53■■□□□ 1.68
RPUSD3-209ENST00000451405 ZC3H13Q5T200 1668 aaKnown RBP25.53■■□□□ 1.68
RPUSD3-209ENST00000451405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.52■■□□□ 1.68
RPUSD3-209ENST00000451405 CFAP65Q6ZU64 1925 aaKnown RBP25.52■■□□□ 1.68
RPUSD3-209ENST00000451405 NLRP1Q9C000 1473 aa25.52■■□□□ 1.68
RPUSD3-209ENST00000451405 POLR1AO95602 1720 aaPredicted RBP25.51■■□□□ 1.68
RPUSD3-209ENST00000451405 ERBINQ96RT1 1412 aa25.51■■□□□ 1.67
RPUSD3-209ENST00000451405 FAM50AQ14320 339 aaKnown RBP25.49■■□□□ 1.67
RPUSD3-209ENST00000451405 UGGT1Q9NYU2 1555 aa25.48■■□□□ 1.67
RPUSD3-209ENST00000451405 ERVK-7P63135 1459 aa25.48■■□□□ 1.67
RPUSD3-209ENST00000451405 ANKRD30AQ9BXX3 1397 aa25.48■■□□□ 1.67
RPUSD3-209ENST00000451405 VWDEQ8N2E2 1590 aa25.48■■□□□ 1.67
RPUSD3-209ENST00000451405 PRDM15P57071 1507 aaPredicted RBP25.46■■□□□ 1.67
RPUSD3-209ENST00000451405 MED14O60244 1454 aa25.45■■□□□ 1.66
RPUSD3-209ENST00000451405 DEPDC5O75140 1603 aa25.43■■□□□ 1.66
RPUSD3-209ENST00000451405 ARHGAP31Q2M1Z3 1444 aa25.42■■□□□ 1.66
RPUSD3-209ENST00000451405 ADGRL2O95490 1459 aa25.4■■□□□ 1.66
RPUSD3-209ENST00000451405 PPARGC1BQ86YN6 1023 aaKnown RBP25.39■■□□□ 1.66
RPUSD3-209ENST00000451405 KANK1Q14678 1352 aa25.39■■□□□ 1.65
RPUSD3-209ENST00000451405 LRRC7Q96NW7 1537 aa25.38■■□□□ 1.65
RPUSD3-209ENST00000451405 ALKQ9UM73 1620 aa25.37■■□□□ 1.65
RPUSD3-209ENST00000451405 UBR1Q8IWV7 1749 aa25.35■■□□□ 1.65
RPUSD3-209ENST00000451405 IQGAP1P46940 1657 aa25.35■■□□□ 1.65
RPUSD3-209ENST00000451405 LMTK2Q8IWU2 1503 aa25.33■■□□□ 1.65
RPUSD3-209ENST00000451405 RGS17Q9UGC6 210 aaPredicted RBP25.33■■□□□ 1.65
RPUSD3-209ENST00000451405 ANKRD50Q9ULJ7 1429 aa25.31■■□□□ 1.64
RPUSD3-209ENST00000451405 LTKP29376 864 aa25.31■■□□□ 1.64
RPUSD3-209ENST00000451405 TXNDC2Q86VQ3 553 aa25.31■■□□□ 1.64
RPUSD3-209ENST00000451405 IDI1Q13907 227 aa25.29■■□□□ 1.64
RPUSD3-209ENST00000451405 EID1Q9Y6B2 187 aa25.28■■□□□ 1.64
RPUSD3-209ENST00000451405 PIK3C2BO00750 1634 aa25.27■■□□□ 1.64
RPUSD3-209ENST00000451405 ARHGAP23Q9P227 1491 aa25.27■■□□□ 1.64
RPUSD3-209ENST00000451405 SYNMO15061 1565 aa25.26■■□□□ 1.63
RPUSD3-209ENST00000451405 SLIT1O75093 1534 aa25.25■■□□□ 1.63
RPUSD3-209ENST00000451405 STRCP1A6NGW2 1772 aa25.24■■□□□ 1.63
RPUSD3-209ENST00000451405 NOS1P29475 1434 aa25.24■■□□□ 1.63
RPUSD3-209ENST00000451405 EFCAB6Q5THR3 1501 aa25.23■■□□□ 1.63
RPUSD3-209ENST00000451405 SCAF11Q99590 1463 aaKnown RBP25.23■■□□□ 1.63
RPUSD3-209ENST00000451405 ITGAEP38570 1179 aa25.23■■□□□ 1.63
RPUSD3-209ENST00000451405 STAG3Q9UJ98 1225 aa25.23■■□□□ 1.63
RPUSD3-209ENST00000451405 TMEM2Q9UHN6 1383 aa25.2■■□□□ 1.63
RPUSD3-209ENST00000451405 POTEAQ6S8J7 498 aa25.2■■□□□ 1.62
RPUSD3-209ENST00000451405 ROCK1Q13464 1354 aa25.19■■□□□ 1.62
RPUSD3-209ENST00000451405 FAM135BQ49AJ0 1406 aa25.18■■□□□ 1.62
RPUSD3-209ENST00000451405 SLC52A1Q9NWF4 448 aa25.16■■□□□ 1.62
RPUSD3-209ENST00000451405 KDM5AP29375 1690 aaKnown RBP25.14■■□□□ 1.62
RPUSD3-209ENST00000451405 PROSER2Q86WR7 435 aaPredicted RBP25.14■■□□□ 1.62
RPUSD3-209ENST00000451405 UNC13BO14795 1591 aa25.14■■□□□ 1.61
RPUSD3-209ENST00000451405 TET3O43151 1660 aa25.13■■□□□ 1.61
RPUSD3-209ENST00000451405 RPRD2Q5VT52 1461 aaKnown RBP25.13■■□□□ 1.61
RPUSD3-209ENST00000451405 TMEM94Q12767 1356 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms