RNA–Protein interactions for RNA: ENST00000450829.5

TM9SF4-205, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-205ENST00000450829 PLEKHH2Q8IVE3 1493 aa8.51□□□□□ -1.05
TM9SF4-205ENST00000450829 MBD5Q9P267 1494 aa8.51□□□□□ -1.05
TM9SF4-205ENST00000450829 CFDP1Q9UEE9 299 aaPredicted RBP8.51□□□□□ -1.05
TM9SF4-205ENST00000450829 UNC13BO14795 1591 aa8.51□□□□□ -1.05
TM9SF4-205ENST00000450829 KDM5DQ9BY66 1539 aa8.5□□□□□ -1.05
TM9SF4-205ENST00000450829 MLECQ14165 292 aa8.5□□□□□ -1.05
TM9SF4-205ENST00000450829 PLPPR3Q6T4P5 718 aa8.5□□□□□ -1.05
TM9SF4-205ENST00000450829 PPP6R1Q9UPN7 881 aa8.5□□□□□ -1.05
TM9SF4-205ENST00000450829 MROH2AA6NES4 1674 aa8.49□□□□□ -1.05
TM9SF4-205ENST00000450829 NCOA1Q15788 1441 aa8.49□□□□□ -1.05
TM9SF4-205ENST00000450829 HSPA2P54652 639 aa8.49□□□□□ -1.05
TM9SF4-205ENST00000450829 AFAP1Q8N556 730 aa8.49□□□□□ -1.05
TM9SF4-205ENST00000450829 ATP7AQ04656 1500 aa8.48□□□□□ -1.05
TM9SF4-205ENST00000450829 KIAA1107Q9UPP5 1409 aa8.47□□□□□ -1.05
TM9SF4-205ENST00000450829 RRP7BPQ9NSQ0 103 aa8.47□□□□□ -1.05
TM9SF4-205ENST00000450829 CHIC2Q9UKJ5 165 aa8.47□□□□□ -1.05
TM9SF4-205ENST00000450829 IQGAP3Q86VI3 1631 aa8.47□□□□□ -1.05
TM9SF4-205ENST00000450829 ANKRD30AQ9BXX3 1397 aa8.47□□□□□ -1.05
TM9SF4-205ENST00000450829 PZPP20742 1482 aa8.46□□□□□ -1.05
TM9SF4-205ENST00000450829 FBXO41Q8TF61 875 aa8.46□□□□□ -1.06
TM9SF4-205ENST00000450829 ACIN1Q9UKV3 1341 aaKnown RBP8.46□□□□□ -1.06
TM9SF4-205ENST00000450829 DEPDC5O75140 1603 aa8.46□□□□□ -1.06
TM9SF4-205ENST00000450829 ZNF142P52746 1687 aaPredicted RBP8.46□□□□□ -1.06
TM9SF4-205ENST00000450829 CLTCQ00610 1675 aaKnown RBP8.46□□□□□ -1.06
TM9SF4-205ENST00000450829 EIF2AK4Q9P2K8 1649 aaKnown RBP8.45□□□□□ -1.06
TM9SF4-205ENST00000450829 CEBPAP49715 358 aaPredicted RBP8.45□□□□□ -1.06
TM9SF4-205ENST00000450829 ZNF777Q9ULD5 760 aaPredicted RBP8.45□□□□□ -1.06
TM9SF4-205ENST00000450829 UHRF1BP1Q6BDS2 1440 aa8.45□□□□□ -1.06
TM9SF4-205ENST00000450829 MYO3AQ8NEV4 1616 aa8.44□□□□□ -1.06
TM9SF4-205ENST00000450829 ANKRD50Q9ULJ7 1429 aa8.44□□□□□ -1.06
TM9SF4-205ENST00000450829 DUOX2Q9NRD8 1548 aa8.44□□□□□ -1.06
TM9SF4-205ENST00000450829 POTEHQ6S545 545 aa8.43□□□□□ -1.06
TM9SF4-205ENST00000450829 KIF15Q9NS87 1388 aa8.43□□□□□ -1.06
TM9SF4-205ENST00000450829 CNTLNQ9NXG0 1405 aa8.43□□□□□ -1.06
TM9SF4-205ENST00000450829 ADRA2BP18089 450 aa8.42□□□□□ -1.06
TM9SF4-205ENST00000450829 POLR1AO95602 1720 aaPredicted RBP8.42□□□□□ -1.06
TM9SF4-205ENST00000450829 A2MP01023 1474 aa8.41□□□□□ -1.06
TM9SF4-205ENST00000450829 FAM135AQ9P2D6 1515 aa8.4□□□□□ -1.06
TM9SF4-205ENST00000450829 NPATQ14207 1427 aa8.4□□□□□ -1.06
TM9SF4-205ENST00000450829 ERBINQ96RT1 1412 aa8.4□□□□□ -1.06
TM9SF4-205ENST00000450829 SPAG9O60271 1321 aaKnown RBP8.4□□□□□ -1.06
TM9SF4-205ENST00000450829 RSPH4AQ5TD94 716 aa8.4□□□□□ -1.06
TM9SF4-205ENST00000450829 SPHKAPQ2M3C7 1700 aa8.4□□□□□ -1.07
TM9SF4-205ENST00000450829 LTBP4Q8N2S1 1624 aa8.4□□□□□ -1.07
TM9SF4-205ENST00000450829 RNF17Q9BXT8 1623 aaKnown RBP8.4□□□□□ -1.07
TM9SF4-205ENST00000450829 CEP170BQ9Y4F5 1589 aaPredicted RBP8.39□□□□□ -1.07
TM9SF4-205ENST00000450829 RTEL1-TNFRSF6BF6WH68 1400 aa8.39□□□□□ -1.07
TM9SF4-205ENST00000450829 HNRNPMP52272 730 aaKnown RBP eCLIP8.39□□□□□ -1.073e-7■■■□□ 15.8
TM9SF4-205ENST00000450829 MYT1LQ9UL68 1186 aa8.39□□□□□ -1.07
TM9SF4-205ENST00000450829 E9PCH4 1651 aa8.39□□□□□ -1.07
TM9SF4-205ENST00000450829 TET3O43151 1660 aa8.39□□□□□ -1.07
TM9SF4-205ENST00000450829 CAMSAP1Q5T5Y3 1602 aa8.39□□□□□ -1.07
TM9SF4-205ENST00000450829 RPRD2Q5VT52 1461 aaKnown RBP8.38□□□□□ -1.07
TM9SF4-205ENST00000450829 PTPRTO14522 1441 aa8.38□□□□□ -1.07
TM9SF4-205ENST00000450829 CEP152O94986 1710 aa8.38□□□□□ -1.07
TM9SF4-205ENST00000450829 SIN3AQ96ST3 1273 aa8.38□□□□□ -1.07
TM9SF4-205ENST00000450829 TIMELESSQ9UNS1 1208 aa8.38□□□□□ -1.07
TM9SF4-205ENST00000450829 MROH1Q8NDA8 1641 aa8.38□□□□□ -1.07
TM9SF4-205ENST00000450829 PRDM15P57071 1507 aaPredicted RBP8.38□□□□□ -1.07
TM9SF4-205ENST00000450829 TONSLQ96HA7 1378 aa8.37□□□□□ -1.07
TM9SF4-205ENST00000450829 ANKRD30BQ9BXX2 1392 aa8.37□□□□□ -1.07
TM9SF4-205ENST00000450829 ZNF316A6NFI3 1004 aaPredicted RBP8.37□□□□□ -1.07
TM9SF4-205ENST00000450829 TSPY4P0CV99 314 aa8.37□□□□□ -1.07
TM9SF4-205ENST00000450829 TSPY10P0CW01 314 aa8.37□□□□□ -1.07
TM9SF4-205ENST00000450829 CERKQ8TCT0 537 aa8.37□□□□□ -1.07
TM9SF4-205ENST00000450829 TRIM52Q96A61 297 aa8.37□□□□□ -1.07
TM9SF4-205ENST00000450829 MPHOSPH9Q99550 1183 aa8.37□□□□□ -1.07
TM9SF4-205ENST00000450829 VWDEQ8N2E2 1590 aa8.36□□□□□ -1.07
TM9SF4-205ENST00000450829 ZMYM3Q14202 1370 aa8.35□□□□□ -1.07
TM9SF4-205ENST00000450829 PLA2R1Q13018 1463 aa8.35□□□□□ -1.07
TM9SF4-205ENST00000450829 NEUROD1Q13562 356 aa8.34□□□□□ -1.07
TM9SF4-205ENST00000450829 NEURL4Q96JN8 1562 aa8.34□□□□□ -1.07
TM9SF4-205ENST00000450829 IQSEC2Q5JU85 1478 aa8.33□□□□□ -1.08
TM9SF4-205ENST00000450829 SLC4A1APQ9BWU0 796 aaKnown RBP8.33□□□□□ -1.08
TM9SF4-205ENST00000450829 ESF1Q9H501 851 aaKnown RBP8.33□□□□□ -1.08
TM9SF4-205ENST00000450829 ZC3H13Q5T200 1668 aaKnown RBP8.33□□□□□ -1.08
TM9SF4-205ENST00000450829 NUP155O75694 1391 aa8.33□□□□□ -1.08
TM9SF4-205ENST00000450829 A2ML1A8K2U0 1454 aa8.32□□□□□ -1.08
TM9SF4-205ENST00000450829 KIF1BO60333 1816 aa8.32□□□□□ -1.08
TM9SF4-205ENST00000450829 DHX29Q7Z478 1369 aaKnown RBP8.32□□□□□ -1.08
TM9SF4-205ENST00000450829 IFT172Q9UG01 1749 aa8.32□□□□□ -1.08
TM9SF4-205ENST00000450829 CFAP65Q6ZU64 1925 aaKnown RBP8.31□□□□□ -1.08
TM9SF4-205ENST00000450829 TRPM2O94759 1503 aa8.31□□□□□ -1.08
TM9SF4-205ENST00000450829 EFCAB6Q5THR3 1501 aa8.31□□□□□ -1.08
TM9SF4-205ENST00000450829 DMRT2Q9Y5R5 561 aa8.31□□□□□ -1.08
TM9SF4-205ENST00000450829 ABCC3O15438 1527 aa8.3□□□□□ -1.08
TM9SF4-205ENST00000450829 CLTCL1P53675 1640 aa8.3□□□□□ -1.08
TM9SF4-205ENST00000450829 TRPM1Q7Z4N2 1603 aa8.3□□□□□ -1.08
TM9SF4-205ENST00000450829 PPP1R15AO75807 674 aaPredicted RBP8.3□□□□□ -1.08
TM9SF4-205ENST00000450829 SPATA31D1Q6ZQQ2 1576 aa8.3□□□□□ -1.08
TM9SF4-205ENST00000450829 LMTK2Q8IWU2 1503 aa8.29□□□□□ -1.08
TM9SF4-205ENST00000450829 LAMC1P11047 1609 aa8.29□□□□□ -1.08
TM9SF4-205ENST00000450829 DIEXFQ68CQ4 756 aaKnown RBP8.29□□□□□ -1.08
TM9SF4-205ENST00000450829 GGT6Q6P531 493 aa8.29□□□□□ -1.08
TM9SF4-205ENST00000450829 NCKAP5LQ9HCH0 1330 aa8.29□□□□□ -1.08
TM9SF4-205ENST00000450829 TNRQ92752 1358 aa8.28□□□□□ -1.08
TM9SF4-205ENST00000450829 PKD2Q13563 968 aa8.28□□□□□ -1.08
TM9SF4-205ENST00000450829 ZNF335Q9H4Z2 1342 aaPredicted RBP8.28□□□□□ -1.08
TM9SF4-205ENST00000450829 STRCP1A6NGW2 1772 aa8.27□□□□□ -1.08
TM9SF4-205ENST00000450829 RALGAPBQ86X10 1494 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms