RNA–Protein interactions for RNA: ENST00000450364.3

SMARCD2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-204ENST00000450364 RNF17Q9BXT8 1623 aaKnown RBP21.5■■□□□ 1.03
SMARCD2-204ENST00000450364 DNMT1P26358 1616 aaKnown RBP21.49■■□□□ 1.03
SMARCD2-204ENST00000450364 KDM5DQ9BY66 1539 aa21.49■■□□□ 1.03
SMARCD2-204ENST00000450364 ZNF142P52746 1687 aaPredicted RBP21.47■■□□□ 1.03
SMARCD2-204ENST00000450364 SHANK2Q9UPX8 1470 aa21.47■■□□□ 1.03
SMARCD2-204ENST00000450364 EIF2AK4Q9P2K8 1649 aaKnown RBP21.47■■□□□ 1.03
SMARCD2-204ENST00000450364 DAPK1P53355 1430 aa21.46■■□□□ 1.03
SMARCD2-204ENST00000450364 FAM135AQ9P2D6 1515 aa21.45■■□□□ 1.02
SMARCD2-204ENST00000450364 NCOA1Q15788 1441 aa21.44■■□□□ 1.02
SMARCD2-204ENST00000450364 DUOX2Q9NRD8 1548 aa21.43■■□□□ 1.02
SMARCD2-204ENST00000450364 CEP170BQ9Y4F5 1589 aaPredicted RBP21.43■■□□□ 1.02
SMARCD2-204ENST00000450364 CAMSAP1Q5T5Y3 1602 aa21.43■■□□□ 1.02
SMARCD2-204ENST00000450364 ABCC3O15438 1527 aa21.42■■□□□ 1.02
SMARCD2-204ENST00000450364 PZPP20742 1482 aa21.42■■□□□ 1.02
SMARCD2-204ENST00000450364 FBXO31Q5XUX0 539 aaPredicted RBP21.42■■□□□ 1.02
SMARCD2-204ENST00000450364 KIF15Q9NS87 1388 aa21.39■■□□□ 1.02
SMARCD2-204ENST00000450364 CEP152O94986 1710 aa21.38■■□□□ 1.01
SMARCD2-204ENST00000450364 ZC3H13Q5T200 1668 aaKnown RBP21.38■■□□□ 1.01
SMARCD2-204ENST00000450364 WASHC2CQ9Y4E1 1318 aa21.38■■□□□ 1.01
SMARCD2-204ENST00000450364 RRP7BPQ9NSQ0 103 aa21.37■■□□□ 1.01
SMARCD2-204ENST00000450364 PTPRTO14522 1441 aa21.37■■□□□ 1.01
SMARCD2-204ENST00000450364 PRDM15P57071 1507 aaPredicted RBP21.35■■□□□ 1.01
SMARCD2-204ENST00000450364 A2ML1A8K2U0 1454 aa21.35■■□□□ 1.01
SMARCD2-204ENST00000450364 DEPDC5O75140 1603 aa21.35■■□□□ 1.01
SMARCD2-204ENST00000450364 ERBINQ96RT1 1412 aa21.35■■□□□ 1.01
SMARCD2-204ENST00000450364 TNRQ92752 1358 aa21.35■■□□□ 1.01
SMARCD2-204ENST00000450364 PLA2R1Q13018 1463 aa21.33■■□□□ 1.01
SMARCD2-204ENST00000450364 CHIC2Q9UKJ5 165 aa21.33■■□□□ 1.01
SMARCD2-204ENST00000450364 ADGRL2O95490 1459 aa21.32■■□□□ 1
SMARCD2-204ENST00000450364 NCKAP5LQ9HCH0 1330 aa21.32■■□□□ 1
SMARCD2-204ENST00000450364 FBXO41Q8TF61 875 aa21.32■■□□□ 1
SMARCD2-204ENST00000450364 SPATA31D1Q6ZQQ2 1576 aa21.31■■□□□ 1
SMARCD2-204ENST00000450364 LTBP4Q8N2S1 1624 aa21.29■■□□□ 1
SMARCD2-204ENST00000450364 CERKQ8TCT0 537 aa21.29■■□□□ 1
SMARCD2-204ENST00000450364 DMRT2Q9Y5R5 561 aa21.29■■□□□ 1
SMARCD2-204ENST00000450364 ERVK-7P63135 1459 aa21.28■■□□□ 1
SMARCD2-204ENST00000450364 ANKRD30AQ9BXX3 1397 aa21.28■■□□□ 1
SMARCD2-204ENST00000450364 FAM50AQ14320 339 aaKnown RBP21.28■■□□□ 1
SMARCD2-204ENST00000450364 PPARGC1BQ86YN6 1023 aaKnown RBP21.28■■□□□ 1
SMARCD2-204ENST00000450364 VWDEQ8N2E2 1590 aa21.27■■□□□ 1
SMARCD2-204ENST00000450364 NEURL4Q96JN8 1562 aa21.27■□□□□ 0.99
SMARCD2-204ENST00000450364 NLRP1Q9C000 1473 aa21.25■□□□□ 0.99
SMARCD2-204ENST00000450364 CFAP65Q6ZU64 1925 aaKnown RBP21.24■□□□□ 0.99
SMARCD2-204ENST00000450364 POLR1AO95602 1720 aaPredicted RBP21.24■□□□□ 0.99
SMARCD2-204ENST00000450364 ARHGAP31Q2M1Z3 1444 aa21.23■□□□□ 0.99
SMARCD2-204ENST00000450364 LMTK2Q8IWU2 1503 aa21.22■□□□□ 0.99
SMARCD2-204ENST00000450364 UGGT1Q9NYU2 1555 aa21.22■□□□□ 0.99
SMARCD2-204ENST00000450364 PKD2Q13563 968 aa21.2■□□□□ 0.98
SMARCD2-204ENST00000450364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.2■□□□□ 0.981e-7■■■■□ 21.5
SMARCD2-204ENST00000450364 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.2■□□□□ 0.98
SMARCD2-204ENST00000450364 UBR1Q8IWV7 1749 aa21.18■□□□□ 0.98
SMARCD2-204ENST00000450364 ZNF335Q9H4Z2 1342 aaPredicted RBP21.17■□□□□ 0.98
SMARCD2-204ENST00000450364 ANKRD50Q9ULJ7 1429 aa21.17■□□□□ 0.98
SMARCD2-204ENST00000450364 EFCAB6Q5THR3 1501 aa21.15■□□□□ 0.98
SMARCD2-204ENST00000450364 SYNMO15061 1565 aa21.14■□□□□ 0.98
SMARCD2-204ENST00000450364 ROCK1Q13464 1354 aa21.13■□□□□ 0.97
SMARCD2-204ENST00000450364 PIK3C2BO00750 1634 aa21.13■□□□□ 0.97
SMARCD2-204ENST00000450364 UNC13BO14795 1591 aa21.13■□□□□ 0.97
SMARCD2-204ENST00000450364 MED14O60244 1454 aa21.13■□□□□ 0.97
SMARCD2-204ENST00000450364 KANK1Q14678 1352 aa21.12■□□□□ 0.97
SMARCD2-204ENST00000450364 THEMISQ8N1K5 641 aaPredicted RBP21.12■□□□□ 0.97
SMARCD2-204ENST00000450364 NOS1P29475 1434 aa21.1■□□□□ 0.97
SMARCD2-204ENST00000450364 ARHGAP23Q9P227 1491 aa21.09■□□□□ 0.97
SMARCD2-204ENST00000450364 RRBP1Q9P2E9 1410 aaKnown RBP21.09■□□□□ 0.97
SMARCD2-204ENST00000450364 NPHP4O75161 1426 aaPredicted RBP21.08■□□□□ 0.97
SMARCD2-204ENST00000450364 ANKLE2Q86XL3 938 aa21.08■□□□□ 0.97
SMARCD2-204ENST00000450364 IQGAP1P46940 1657 aa21.08■□□□□ 0.96
SMARCD2-204ENST00000450364 IQSEC2Q5JU85 1478 aa21.07■□□□□ 0.96
SMARCD2-204ENST00000450364 TET3O43151 1660 aa21.07■□□□□ 0.96
SMARCD2-204ENST00000450364 SLIT1O75093 1534 aa21.07■□□□□ 0.96
SMARCD2-204ENST00000450364 ITGAEP38570 1179 aa21.06■□□□□ 0.96
SMARCD2-204ENST00000450364 STRCP1A6NGW2 1772 aa21.05■□□□□ 0.96
SMARCD2-204ENST00000450364 LTKP29376 864 aa21.04■□□□□ 0.96
SMARCD2-204ENST00000450364 KDM5AP29375 1690 aaKnown RBP21.04■□□□□ 0.96
SMARCD2-204ENST00000450364 GCC2Q8IWJ2 1684 aa21.04■□□□□ 0.96
SMARCD2-204ENST00000450364 IQGAP3Q86VI3 1631 aa21.04■□□□□ 0.96
SMARCD2-204ENST00000450364 E9PCH4 1651 aa21.03■□□□□ 0.96
SMARCD2-204ENST00000450364 IDI1Q13907 227 aa21.03■□□□□ 0.96
SMARCD2-204ENST00000450364 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
SMARCD2-204ENST00000450364 SCAF11Q99590 1463 aaKnown RBP21.01■□□□□ 0.95
SMARCD2-204ENST00000450364 ADGRB3O60242 1522 aa20.99■□□□□ 0.95
SMARCD2-204ENST00000450364 TMEM2Q9UHN6 1383 aa20.98■□□□□ 0.95
SMARCD2-204ENST00000450364 MYO5BQ9ULV0 1848 aa20.97■□□□□ 0.95
SMARCD2-204ENST00000450364 CPS1P31327 1500 aa20.97■□□□□ 0.95
SMARCD2-204ENST00000450364 TXNDC2Q86VQ3 553 aa20.95■□□□□ 0.94
SMARCD2-204ENST00000450364 TMEM131LA2VDJ0 1609 aa20.94■□□□□ 0.94
SMARCD2-204ENST00000450364 NAIPQ13075 1403 aa20.94■□□□□ 0.94
SMARCD2-204ENST00000450364 ALKQ9UM73 1620 aa20.93■□□□□ 0.94
SMARCD2-204ENST00000450364 NUP155O75694 1391 aa20.93■□□□□ 0.94
SMARCD2-204ENST00000450364 SLC52A1Q9NWF4 448 aa20.91■□□□□ 0.94
SMARCD2-204ENST00000450364 LRRC7Q96NW7 1537 aa20.9■□□□□ 0.94
SMARCD2-204ENST00000450364 ZFYVE9O95405 1425 aa20.9■□□□□ 0.94
SMARCD2-204ENST00000450364 STAG3Q9UJ98 1225 aa20.88■□□□□ 0.93
SMARCD2-204ENST00000450364 XIRP1Q702N8 1843 aaKnown RBP20.88■□□□□ 0.93
SMARCD2-204ENST00000450364 UBAP1LF5GYI3 381 aa20.87■□□□□ 0.93
SMARCD2-204ENST00000450364 EID1Q9Y6B2 187 aa20.86■□□□□ 0.93
SMARCD2-204ENST00000450364 HFM1A2PYH4 1435 aa20.85■□□□□ 0.93
SMARCD2-204ENST00000450364 SPHKAPQ2M3C7 1700 aa20.84■□□□□ 0.93
SMARCD2-204ENST00000450364 RIMS2Q9UQ26 1411 aa20.83■□□□□ 0.93
SMARCD2-204ENST00000450364 SLC26A8Q96RN1 970 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms