RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 NCOA1Q15788 1441 aa16.23■□□□□ 0.19
SMPD4-211ENST00000449159 DHX29Q7Z478 1369 aaKnown RBP16.23■□□□□ 0.19
SMPD4-211ENST00000449159 DUOX2Q9NRD8 1548 aa16.22■□□□□ 0.19
SMPD4-211ENST00000449159 EIF2AK4Q9P2K8 1649 aaKnown RBP16.21■□□□□ 0.19
SMPD4-211ENST00000449159 RRP7BPQ9NSQ0 103 aa16.21■□□□□ 0.19
SMPD4-211ENST00000449159 ANKRD30AQ9BXX3 1397 aa16.21■□□□□ 0.19
SMPD4-211ENST00000449159 RNF17Q9BXT8 1623 aaKnown RBP16.19■□□□□ 0.18
SMPD4-211ENST00000449159 CERKQ8TCT0 537 aa16.18■□□□□ 0.18
SMPD4-211ENST00000449159 ZNF142P52746 1687 aaPredicted RBP16.18■□□□□ 0.18
SMPD4-211ENST00000449159 ROCK1Q13464 1354 aa16.17■□□□□ 0.18
SMPD4-211ENST00000449159 MROH1Q8NDA8 1641 aa16.17■□□□□ 0.18
SMPD4-211ENST00000449159 ERBINQ96RT1 1412 aa16.17■□□□□ 0.18
SMPD4-211ENST00000449159 GCC2Q8IWJ2 1684 aa16.16■□□□□ 0.18
SMPD4-211ENST00000449159 MYO3AQ8NEV4 1616 aa16.16■□□□□ 0.18
SMPD4-211ENST00000449159 CLTCQ00610 1675 aaKnown RBP16.15■□□□□ 0.18
SMPD4-211ENST00000449159 KIF3BO15066 747 aa16.15■□□□□ 0.18
SMPD4-211ENST00000449159 CNTLNQ9NXG0 1405 aa16.15■□□□□ 0.18
SMPD4-211ENST00000449159 DEPDC5O75140 1603 aa16.15■□□□□ 0.18
SMPD4-211ENST00000449159 CEBPAP49715 358 aaPredicted RBP16.14■□□□□ 0.17
SMPD4-211ENST00000449159 GGT6Q6P531 493 aa16.13■□□□□ 0.17
SMPD4-211ENST00000449159 ANKRD50Q9ULJ7 1429 aa16.12■□□□□ 0.17
SMPD4-211ENST00000449159 CEP152O94986 1710 aa16.12■□□□□ 0.17
SMPD4-211ENST00000449159 PTPRTO14522 1441 aa16.11■□□□□ 0.17
SMPD4-211ENST00000449159 PRDM15P57071 1507 aaPredicted RBP16.11■□□□□ 0.17
SMPD4-211ENST00000449159 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
SMPD4-211ENST00000449159 SPATA31D1Q6ZQQ2 1576 aa16.11■□□□□ 0.17
SMPD4-211ENST00000449159 NAIPQ13075 1403 aa16.11■□□□□ 0.17
SMPD4-211ENST00000449159 KDM5DQ9BY66 1539 aa16.09■□□□□ 0.17
SMPD4-211ENST00000449159 HFM1A2PYH4 1435 aa16.09■□□□□ 0.17
SMPD4-211ENST00000449159 NPATQ14207 1427 aa16.09■□□□□ 0.17
SMPD4-211ENST00000449159 IQSEC2Q5JU85 1478 aa16.09■□□□□ 0.17
SMPD4-211ENST00000449159 UNC13BO14795 1591 aa16.09■□□□□ 0.17
SMPD4-211ENST00000449159 CAMSAP1Q5T5Y3 1602 aa16.08■□□□□ 0.17
SMPD4-211ENST00000449159 LTBP4Q8N2S1 1624 aa16.08■□□□□ 0.17
SMPD4-211ENST00000449159 ZC3H13Q5T200 1668 aaKnown RBP16.08■□□□□ 0.17
SMPD4-211ENST00000449159 ESF1Q9H501 851 aaKnown RBP16.08■□□□□ 0.16
SMPD4-211ENST00000449159 ABCC3O15438 1527 aa16.08■□□□□ 0.16
SMPD4-211ENST00000449159 VWDEQ8N2E2 1590 aa16.06■□□□□ 0.16
SMPD4-211ENST00000449159 CEP170BQ9Y4F5 1589 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-211ENST00000449159 FAM135AQ9P2D6 1515 aa16.06■□□□□ 0.16
SMPD4-211ENST00000449159 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.16
SMPD4-211ENST00000449159 POLR1AO95602 1720 aaPredicted RBP16.04■□□□□ 0.16
SMPD4-211ENST00000449159 WASHC2CQ9Y4E1 1318 aa16.03■□□□□ 0.16
SMPD4-211ENST00000449159 CFAP65Q6ZU64 1925 aaKnown RBP16.02■□□□□ 0.16
SMPD4-211ENST00000449159 IQGAP3Q86VI3 1631 aa16.02■□□□□ 0.16
SMPD4-211ENST00000449159 PPP6R1Q9UPN7 881 aa16.02■□□□□ 0.16
SMPD4-211ENST00000449159 ZMYM3Q14202 1370 aa16.01■□□□□ 0.15
SMPD4-211ENST00000449159 PLA2R1Q13018 1463 aa16■□□□□ 0.15
SMPD4-211ENST00000449159 KANK1Q14678 1352 aa16■□□□□ 0.15
SMPD4-211ENST00000449159 LMTK2Q8IWU2 1503 aa15.99■□□□□ 0.15
SMPD4-211ENST00000449159 TET3O43151 1660 aa15.99■□□□□ 0.15
SMPD4-211ENST00000449159 DISP3Q9P2K9 1392 aa15.99■□□□□ 0.15
SMPD4-211ENST00000449159 EFCAB6Q5THR3 1501 aa15.99■□□□□ 0.15
SMPD4-211ENST00000449159 PZPP20742 1482 aa15.98■□□□□ 0.15
SMPD4-211ENST00000449159 SETD5Q9C0A6 1442 aa15.96■□□□□ 0.15
SMPD4-211ENST00000449159 NUP155O75694 1391 aa15.96■□□□□ 0.15
SMPD4-211ENST00000449159 E9PCH4 1651 aa15.95■□□□□ 0.14
SMPD4-211ENST00000449159 FBXO31Q5XUX0 539 aaPredicted RBP15.94■□□□□ 0.14
SMPD4-211ENST00000449159 RAB3GAP2Q9H2M9 1393 aa15.94■□□□□ 0.14
SMPD4-211ENST00000449159 ARHGAP31Q2M1Z3 1444 aa15.94■□□□□ 0.14
SMPD4-211ENST00000449159 ERVK-7P63135 1459 aa15.92■□□□□ 0.14
SMPD4-211ENST00000449159 TRIM26Q12899 539 aaPredicted RBP15.92■□□□□ 0.14
SMPD4-211ENST00000449159 A2ML1A8K2U0 1454 aa15.91■□□□□ 0.14
SMPD4-211ENST00000449159 TRIM52Q96A61 297 aa15.9■□□□□ 0.14
SMPD4-211ENST00000449159 NEURL4Q96JN8 1562 aa15.9■□□□□ 0.14
SMPD4-211ENST00000449159 SYNMO15061 1565 aa15.89■□□□□ 0.13
SMPD4-211ENST00000449159 TNRQ92752 1358 aa15.88■□□□□ 0.13
SMPD4-211ENST00000449159 RPRD2Q5VT52 1461 aaKnown RBP15.88■□□□□ 0.13
SMPD4-211ENST00000449159 SPHKAPQ2M3C7 1700 aa15.87■□□□□ 0.13
SMPD4-211ENST00000449159 ZNF335Q9H4Z2 1342 aaPredicted RBP15.87■□□□□ 0.13
SMPD4-211ENST00000449159 PKD2Q13563 968 aa15.86■□□□□ 0.13
SMPD4-211ENST00000449159 NOS1P29475 1434 aa15.85■□□□□ 0.13
SMPD4-211ENST00000449159 ILDR2Q71H61 639 aa15.85■□□□□ 0.13
SMPD4-211ENST00000449159 NCKAP5LQ9HCH0 1330 aa15.85■□□□□ 0.13
SMPD4-211ENST00000449159 UGGT1Q9NYU2 1555 aa15.84■□□□□ 0.13
SMPD4-211ENST00000449159 SOCS7O14512 581 aa15.84■□□□□ 0.13
SMPD4-211ENST00000449159 CPS1P31327 1500 aa15.84■□□□□ 0.13
SMPD4-211ENST00000449159 PIK3C2BO00750 1634 aa15.83■□□□□ 0.13
SMPD4-211ENST00000449159 SLC4A1APQ9BWU0 796 aaKnown RBP15.83■□□□□ 0.12
SMPD4-211ENST00000449159 NLRP1Q9C000 1473 aa15.83■□□□□ 0.12
SMPD4-211ENST00000449159 IQGAP1P46940 1657 aa15.83■□□□□ 0.12
SMPD4-211ENST00000449159 UBR1Q8IWV7 1749 aa15.82■□□□□ 0.12
SMPD4-211ENST00000449159 MYO5BQ9ULV0 1848 aa15.81■□□□□ 0.12
SMPD4-211ENST00000449159 FOXD1Q16676 465 aa15.8■□□□□ 0.12
SMPD4-211ENST00000449159 MPHOSPH9Q99550 1183 aa15.8■□□□□ 0.12
SMPD4-211ENST00000449159 CLTCL1P53675 1640 aa15.79■□□□□ 0.12
SMPD4-211ENST00000449159 MED1Q15648 1581 aaPredicted RBP15.79■□□□□ 0.12
SMPD4-211ENST00000449159 TRPM2O94759 1503 aa15.78■□□□□ 0.12
SMPD4-211ENST00000449159 UBAP1LF5GYI3 381 aa15.78■□□□□ 0.12
SMPD4-211ENST00000449159 HRCP23327 699 aa15.78■□□□□ 0.12
SMPD4-211ENST00000449159 ADGRB3O60242 1522 aa15.77■□□□□ 0.11
SMPD4-211ENST00000449159 KDM5AP29375 1690 aaKnown RBP15.76■□□□□ 0.11
SMPD4-211ENST00000449159 ACIN1Q9UKV3 1341 aaKnown RBP15.76■□□□□ 0.11
SMPD4-211ENST00000449159 IDI1Q13907 227 aa15.76■□□□□ 0.11
SMPD4-211ENST00000449159 PCGF6Q9BYE7 350 aa15.76■□□□□ 0.11
SMPD4-211ENST00000449159 TMEM131LA2VDJ0 1609 aa15.76■□□□□ 0.11
SMPD4-211ENST00000449159 STRCP1A6NGW2 1772 aa15.75■□□□□ 0.11
SMPD4-211ENST00000449159 KIF1BO60333 1816 aa15.73■□□□□ 0.11
SMPD4-211ENST00000449159 MED14O60244 1454 aa15.73■□□□□ 0.11
SMPD4-211ENST00000449159 SLC52A1Q9NWF4 448 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms